RNA–Protein interactions for RNA: ENST00000511891.5

COPS4-211, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-211ENST00000511891 U2AF1L5P0DN76 240 aaPredicted RBP13.27□□□□□ -0.29
COPS4-211ENST00000511891 RFC4P35249 363 aa13.27□□□□□ -0.29
COPS4-211ENST00000511891 U2AF1Q01081 240 aaKnown RBP eCLIP13.27□□□□□ -0.29
COPS4-211ENST00000511891 INTS5Q6P9B9 1019 aaKnown RBP13.27□□□□□ -0.29
COPS4-211ENST00000511891 IL17REQ8NFR9 667 aa13.27□□□□□ -0.29
COPS4-211ENST00000511891 GAS2L2Q8NHY3 880 aa13.27□□□□□ -0.29
COPS4-211ENST00000511891 SRP68Q9UHB9 627 aaKnown RBP13.27□□□□□ -0.29
COPS4-211ENST00000511891 ADAMTS7Q9UKP4 1686 aa13.27□□□□□ -0.29
COPS4-211ENST00000511891 GNAT3A8MTJ3 354 aa13.26□□□□□ -0.29
COPS4-211ENST00000511891 GYS1P13807 737 aa13.26□□□□□ -0.29
COPS4-211ENST00000511891 KCPQ6ZWJ8 1503 aa13.26□□□□□ -0.29
COPS4-211ENST00000511891 NUDCQ9Y266 331 aa13.26□□□□□ -0.29
COPS4-211ENST00000511891 ATXN8OSP0DMR3 200 aa13.25□□□□□ -0.29
COPS4-211ENST00000511891 NLGN1Q8N2Q7 840 aa13.25□□□□□ -0.29
COPS4-211ENST00000511891 CCDC87Q9NVE4 849 aa13.25□□□□□ -0.29
COPS4-211ENST00000511891 CYP19A1P11511 503 aaPredicted RBP13.24□□□□□ -0.29
COPS4-211ENST00000511891 TEFQ10587 303 aa13.24□□□□□ -0.29
COPS4-211ENST00000511891 ZNF784Q8NCA9 323 aaPredicted RBP13.24□□□□□ -0.29
COPS4-211ENST00000511891 C4AP0C0L4 1744 aa13.24□□□□□ -0.29
COPS4-211ENST00000511891 CICQ96RK0 1608 aaPredicted RBP13.24□□□□□ -0.29
COPS4-211ENST00000511891 CHD4Q14839 1912 aa13.23□□□□□ -0.29
COPS4-211ENST00000511891 TTC5Q8N0Z6 440 aa13.23□□□□□ -0.29
COPS4-211ENST00000511891 ZBTB1Q9Y2K1 713 aa13.23□□□□□ -0.29
COPS4-211ENST00000511891 SOS1Q07889 1333 aaPredicted RBP13.22□□□□□ -0.29
COPS4-211ENST00000511891 USP42Q9H9J4 1324 aaKnown RBP13.22□□□□□ -0.29
COPS4-211ENST00000511891 KCNQ3O43525 872 aa13.22□□□□□ -0.29
COPS4-211ENST00000511891 GRIN3BO60391 1043 aa13.22□□□□□ -0.29
COPS4-211ENST00000511891 FCHSD2O94868 740 aa13.22□□□□□ -0.29
COPS4-211ENST00000511891 FKBP8Q14318 412 aa13.22□□□□□ -0.29
COPS4-211ENST00000511891 ZNF496Q96IT1 587 aaPredicted RBP13.22□□□□□ -0.29
COPS4-211ENST00000511891 CEMIPQ8WUJ3 1361 aa13.21□□□□□ -0.29
COPS4-211ENST00000511891 ZNF790Q6PG37 636 aa13.21□□□□□ -0.29
COPS4-211ENST00000511891 MCM10Q7L590 875 aa13.21□□□□□ -0.29
COPS4-211ENST00000511891 VSIG10Q8N0Z9 540 aa13.21□□□□□ -0.29
COPS4-211ENST00000511891 SSUH2Q9Y2M2 353 aa13.21□□□□□ -0.29
COPS4-211ENST00000511891 PARP3Q9Y6F1 533 aa13.21□□□□□ -0.29
COPS4-211ENST00000511891 UBR2Q8IWV8 1755 aa13.2□□□□□ -0.3
COPS4-211ENST00000511891 CANXP27824 592 aaKnown RBP13.2□□□□□ -0.3
COPS4-211ENST00000511891 DDR1Q08345 913 aa13.2□□□□□ -0.3
COPS4-211ENST00000511891 DDX10Q13206 875 aaKnown RBP13.2□□□□□ -0.3
COPS4-211ENST00000511891 MKRN4PQ13434 485 aaPredicted RBP13.2□□□□□ -0.3
COPS4-211ENST00000511891 DCTN1Q14203 1278 aa13.2□□□□□ -0.3
COPS4-211ENST00000511891 USPL1Q5W0Q7 1092 aa13.2□□□□□ -0.3
COPS4-211ENST00000511891 C10orf71Q711Q0 1435 aa13.2□□□□□ -0.3
COPS4-211ENST00000511891 SIPA1L3O60292 1781 aaPredicted RBP13.2□□□□□ -0.3
COPS4-211ENST00000511891 COL15A1P39059 1388 aa13.2□□□□□ -0.3
COPS4-211ENST00000511891 HEG1Q9ULI3 1381 aa13.2□□□□□ -0.3
COPS4-211ENST00000511891 PXDNLA1KZ92 1463 aa13.19□□□□□ -0.3
COPS4-211ENST00000511891 A0A0G2JLW4 131 aa13.19□□□□□ -0.3
COPS4-211ENST00000511891 BTBD11A6QL63 1104 aa13.19□□□□□ -0.3
COPS4-211ENST00000511891 ZPR1O75312 459 aa13.19□□□□□ -0.3
COPS4-211ENST00000511891 DPEP1P16444 411 aa13.18□□□□□ -0.3
COPS4-211ENST00000511891 RTF1Q92541 710 aaKnown RBP13.18□□□□□ -0.3
COPS4-211ENST00000511891 N4BP2Q86UW6 1770 aaPredicted RBP13.17□□□□□ -0.3
COPS4-211ENST00000511891 KIAA1551Q9HCM1 1747 aa13.17□□□□□ -0.3
COPS4-211ENST00000511891 POLRMTO00411 1230 aaKnown RBP13.17□□□□□ -0.3
COPS4-211ENST00000511891 STARD3NLO95772 234 aa13.17□□□□□ -0.3
COPS4-211ENST00000511891 TM4SF1P30408 202 aa13.17□□□□□ -0.3
COPS4-211ENST00000511891 TGFB2P61812 414 aa13.17□□□□□ -0.3
COPS4-211ENST00000511891 FMNL2Q96PY5 1086 aa13.17□□□□□ -0.3
COPS4-211ENST00000511891 BCL2L12Q9HB09 334 aa13.17□□□□□ -0.3
COPS4-211ENST00000511891 NARFQ9UHQ1 456 aa13.17□□□□□ -0.3
COPS4-211ENST00000511891 ZNF330Q9Y3S2 320 aaPredicted RBP13.17□□□□□ -0.3
COPS4-211ENST00000511891 KIF13BQ9NQT8 1826 aa13.17□□□□□ -0.3
COPS4-211ENST00000511891 PRAMEF22A3QJZ6 481 aa13.16□□□□□ -0.3
COPS4-211ENST00000511891 A1BGP04217 495 aa13.16□□□□□ -0.3
COPS4-211ENST00000511891 EIF5P55010 431 aaKnown RBP13.16□□□□□ -0.3
COPS4-211ENST00000511891 NFIXQ14938 502 aa13.16□□□□□ -0.3
COPS4-211ENST00000511891 PLSCR2Q9NRY7 297 aa13.16□□□□□ -0.3
COPS4-211ENST00000511891 UTRNP46939 3433 aa13.16□□□□□ -0.3
COPS4-211ENST00000511891 PLEKHF1Q96S99 279 aa13.15□□□□□ -0.3
COPS4-211ENST00000511891 MIS18AQ9NYP9 233 aa13.15□□□□□ -0.3
COPS4-211ENST00000511891 BCS1LQ9Y276 419 aa13.15□□□□□ -0.3
COPS4-211ENST00000511891 HTATSF1O43719 755 aaKnown RBP13.14□□□□□ -0.31
COPS4-211ENST00000511891 KCNA3P22001 575 aa13.14□□□□□ -0.31
COPS4-211ENST00000511891 PIP4K2AP48426 406 aaPredicted RBP13.14□□□□□ -0.31
COPS4-211ENST00000511891 RALBP1Q15311 655 aa13.14□□□□□ -0.31
COPS4-211ENST00000511891 BICDL1Q6ZP65 573 aa13.14□□□□□ -0.31
COPS4-211ENST00000511891 THUMPD2Q9BTF0 503 aaKnown RBP13.14□□□□□ -0.31
COPS4-211ENST00000511891 TEX13AQ9BXU3 409 aaPredicted RBP13.14□□□□□ -0.31
COPS4-211ENST00000511891 TBC1D2BQ9UPU7 963 aa13.14□□□□□ -0.31
COPS4-211ENST00000511891 USP16Q9Y5T5 823 aa13.14□□□□□ -0.31
COPS4-211ENST00000511891 NEFMP07197 916 aa13.13□□□□□ -0.31
COPS4-211ENST00000511891 PRR29P0C7W0 189 aa13.13□□□□□ -0.31
COPS4-211ENST00000511891 POTEIP0CG38 1075 aa13.13□□□□□ -0.31
COPS4-211ENST00000511891 CHRNA5P30532 468 aa13.13□□□□□ -0.31
COPS4-211ENST00000511891 GOLGB1Q14789 3259 aaKnown RBP13.13□□□□□ -0.31
COPS4-211ENST00000511891 A0A087WZG4 1122 aa13.12□□□□□ -0.31
COPS4-211ENST00000511891 SERPINB2P05120 415 aa13.12□□□□□ -0.31
COPS4-211ENST00000511891 TAF7Q15545 349 aaPredicted RBP13.12□□□□□ -0.31
COPS4-211ENST00000511891 NFE2L2Q16236 605 aa13.12□□□□□ -0.31
COPS4-211ENST00000511891 ATP10DQ9P241 1426 aa13.12□□□□□ -0.31
COPS4-211ENST00000511891 SNRPA1P09661 255 aaKnown RBP13.11□□□□□ -0.31
COPS4-211ENST00000511891 IL6STP40189 918 aaPredicted RBP13.11□□□□□ -0.31
COPS4-211ENST00000511891 TBC1D9BQ66K14 1250 aa13.11□□□□□ -0.31
COPS4-211ENST00000511891 MAPK8IP3Q9UPT6 1336 aa13.11□□□□□ -0.31
COPS4-211ENST00000511891 ADCY9O60503 1353 aa13.1□□□□□ -0.31
COPS4-211ENST00000511891 DLG5Q8TDM6 1919 aa13.1□□□□□ -0.31
COPS4-211ENST00000511891 ARHGAP27Q6ZUM4 889 aa13.1□□□□□ -0.31
COPS4-211ENST00000511891 ZNF526Q8TF50 670 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms