RNA–Protein interactions for RNA: ENST00000511769.5

PTPN20-225, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-225ENST00000511769 TSKSQ9UJT2 592 aa13.17□□□□□ -0.3
PTPN20-225ENST00000511769 PDE4DIPQ5VU43 2346 aa13.17□□□□□ -0.3
PTPN20-225ENST00000511769 DEFB115Q30KQ5 88 aa13.16□□□□□ -0.3
PTPN20-225ENST00000511769 LINC00116Q8NCU8 138 aa13.16□□□□□ -0.3
PTPN20-225ENST00000511769 CFAP53Q96M91 514 aa13.16□□□□□ -0.3
PTPN20-225ENST00000511769 YTHDC1Q96MU7 727 aaKnown RBP13.16□□□□□ -0.3
PTPN20-225ENST00000511769 ANKRD26Q9UPS8 1709 aa13.16□□□□□ -0.3
PTPN20-225ENST00000511769 NLGN1Q8N2Q7 840 aa13.15□□□□□ -0.3
PTPN20-225ENST00000511769 LTV1Q96GA3 475 aaPredicted RBP13.15□□□□□ -0.3
PTPN20-225ENST00000511769 PARP3Q9Y6F1 533 aa13.15□□□□□ -0.3
PTPN20-225ENST00000511769 LTN1O94822 1766 aa13.15□□□□□ -0.3
PTPN20-225ENST00000511769 RASSF10A6NK89 507 aa13.14□□□□□ -0.31
PTPN20-225ENST00000511769 CHRNA5P30532 468 aa13.14□□□□□ -0.31
PTPN20-225ENST00000511769 MTHFSP49914 203 aa13.14□□□□□ -0.31
PTPN20-225ENST00000511769 DGKZQ13574 1117 aa13.14□□□□□ -0.31
PTPN20-225ENST00000511769 DPY19L2Q6NUT2 758 aa13.14□□□□□ -0.31
PTPN20-225ENST00000511769 MPRIPQ6WCQ1 1025 aa13.14□□□□□ -0.31
PTPN20-225ENST00000511769 PNISRQ8TF01 805 aaKnown RBP13.13□□□□□ -0.31
PTPN20-225ENST00000511769 SMARCC1Q92922 1105 aaPredicted RBP13.13□□□□□ -0.31
PTPN20-225ENST00000511769 MEGF6O75095 1541 aa13.13□□□□□ -0.31
PTPN20-225ENST00000511769 USP31Q70CQ4 1352 aa13.13□□□□□ -0.31
PTPN20-225ENST00000511769 WDR43Q15061 677 aaKnown RBP eCLIP13.13□□□□□ -0.31
PTPN20-225ENST00000511769 GCC1Q96CN9 775 aa13.13□□□□□ -0.31
PTPN20-225ENST00000511769 PPM1GO15355 546 aaPredicted RBP13.12□□□□□ -0.31
PTPN20-225ENST00000511769 ABT1Q9ULW3 272 aaKnown RBP13.12□□□□□ -0.31
PTPN20-225ENST00000511769 DLL1O00548 723 aa13.11□□□□□ -0.31
PTPN20-225ENST00000511769 LDHDQ86WU2 507 aa13.11□□□□□ -0.31
PTPN20-225ENST00000511769 FAM208AQ9UK61 1670 aaKnown RBP13.1□□□□□ -0.31
PTPN20-225ENST00000511769 THSD7BQ9C0I4 1608 aa13.1□□□□□ -0.31
PTPN20-225ENST00000511769 GRM1Q13255 1194 aa13.1□□□□□ -0.31
PTPN20-225ENST00000511769 HABP4Q5JVS0 413 aaKnown RBP13.1□□□□□ -0.31
PTPN20-225ENST00000511769 PAXIP1Q6ZW49 1069 aaPredicted RBP13.1□□□□□ -0.31
PTPN20-225ENST00000511769 POLKQ9UBT6 870 aa13.1□□□□□ -0.31
PTPN20-225ENST00000511769 NUDCQ9Y266 331 aa13.1□□□□□ -0.31
PTPN20-225ENST00000511769 LOC102724428A0A0B4J2F2 783 aa13.09□□□□□ -0.31
PTPN20-225ENST00000511769 ITGBL1O95965 494 aaPredicted RBP13.09□□□□□ -0.31
PTPN20-225ENST00000511769 FBLN1P23142 703 aa13.09□□□□□ -0.31
PTPN20-225ENST00000511769 SIK1P57059 783 aa13.09□□□□□ -0.31
PTPN20-225ENST00000511769 LTBP1Q14766 1721 aa13.09□□□□□ -0.31
PTPN20-225ENST00000511769 TRAPPC3LQ5T215 181 aa13.09□□□□□ -0.31
PTPN20-225ENST00000511769 GYS1P13807 737 aa13.08□□□□□ -0.32
PTPN20-225ENST00000511769 ITPK1Q13572 414 aa13.08□□□□□ -0.32
PTPN20-225ENST00000511769 RRS1Q15050 365 aaKnown RBP13.08□□□□□ -0.32
PTPN20-225ENST00000511769 DIAPH1O60610 1272 aaKnown RBP13.07□□□□□ -0.32
PTPN20-225ENST00000511769 ATXN8OSP0DMR3 200 aa13.07□□□□□ -0.32
PTPN20-225ENST00000511769 CAPNS2Q96L46 248 aa13.07□□□□□ -0.32
PTPN20-225ENST00000511769 RTCBQ9Y3I0 505 aaKnown RBP13.07□□□□□ -0.32
PTPN20-225ENST00000511769 EMILIN1Q9Y6C2 1016 aa13.07□□□□□ -0.32
PTPN20-225ENST00000511769 MAP2P11137 1827 aaKnown RBP13.06□□□□□ -0.32
PTPN20-225ENST00000511769 NFKBIEO00221 500 aa13.06□□□□□ -0.32
PTPN20-225ENST00000511769 DDNO94850 711 aaPredicted RBP13.06□□□□□ -0.32
PTPN20-225ENST00000511769 AMPHP49418 695 aa13.06□□□□□ -0.32
PTPN20-225ENST00000511769 HNRNPUQ00839 825 aaKnown RBP eCLIP13.06□□□□□ -0.32
PTPN20-225ENST00000511769 GPR101Q96P66 508 aaPredicted RBP13.06□□□□□ -0.32
PTPN20-225ENST00000511769 ADAMTS8Q9UP79 889 aa13.06□□□□□ -0.32
PTPN20-225ENST00000511769 ATP6V1AP38606 617 aa13.05□□□□□ -0.32
PTPN20-225ENST00000511769 ECE1P42892 770 aa13.05□□□□□ -0.32
PTPN20-225ENST00000511769 ERFEQ4G0M1 354 aa13.05□□□□□ -0.32
PTPN20-225ENST00000511769 EAPPQ56P03 285 aaPredicted RBP13.05□□□□□ -0.32
PTPN20-225ENST00000511769 ARHGEF1Q92888 912 aaKnown RBP13.05□□□□□ -0.32
PTPN20-225ENST00000511769 CCDC88AQ3V6T2 1871 aa13.05□□□□□ -0.32
PTPN20-225ENST00000511769 IQCA1LA6NCM1 817 aa13.04□□□□□ -0.32
PTPN20-225ENST00000511769 U2SURPO15042 1029 aaKnown RBP13.04□□□□□ -0.32
PTPN20-225ENST00000511769 CENPBP07199 599 aaPredicted RBP13.04□□□□□ -0.32
PTPN20-225ENST00000511769 RFC4P35249 363 aa13.04□□□□□ -0.32
PTPN20-225ENST00000511769 CYP4F22Q6NT55 531 aa13.04□□□□□ -0.32
PTPN20-225ENST00000511769 NBPF15Q8N660 670 aa13.04□□□□□ -0.32
PTPN20-225ENST00000511769 PIGBQ92521 554 aa13.04□□□□□ -0.32
PTPN20-225ENST00000511769 IP6K1Q92551 441 aa13.04□□□□□ -0.32
PTPN20-225ENST00000511769 CLEC11AQ9Y240 323 aa13.04□□□□□ -0.32
PTPN20-225ENST00000511769 INSRP06213 1382 aa13.04□□□□□ -0.32
PTPN20-225ENST00000511769 U2AF1L5P0DN76 240 aaPredicted RBP13.03□□□□□ -0.32
PTPN20-225ENST00000511769 U2AF1Q01081 240 aaKnown RBP eCLIP13.03□□□□□ -0.32
PTPN20-225ENST00000511769 PNNQ9H307 717 aaKnown RBP13.03□□□□□ -0.32
PTPN20-225ENST00000511769 TAF1DQ9H5J8 278 aaPredicted RBP13.03□□□□□ -0.32
PTPN20-225ENST00000511769 MAP3K19Q56UN5 1328 aa13.03□□□□□ -0.32
PTPN20-225ENST00000511769 SMG6Q86US8 1419 aaKnown RBP13.03□□□□□ -0.32
PTPN20-225ENST00000511769 ITGB4P16144 1822 aa13.02□□□□□ -0.32
PTPN20-225ENST00000511769 DDR1Q08345 913 aa13.02□□□□□ -0.33
PTPN20-225ENST00000511769 PCDH11XQ9BZA7 1347 aa13.02□□□□□ -0.33
PTPN20-225ENST00000511769 PCDH11YQ9BZA8 1340 aa13.02□□□□□ -0.33
PTPN20-225ENST00000511769 KIF24Q5T7B8 1368 aa13.02□□□□□ -0.33
PTPN20-225ENST00000511769 RGPD2P0DJD1 1756 aa13.02□□□□□ -0.33
PTPN20-225ENST00000511769 CASP8AP2Q9UKL3 1982 aa13.01□□□□□ -0.33
PTPN20-225ENST00000511769 CA12O43570 354 aa13.01□□□□□ -0.33
PTPN20-225ENST00000511769 AOC2O75106 756 aa13.01□□□□□ -0.33
PTPN20-225ENST00000511769 REM2Q8IYK8 340 aaPredicted RBP13.01□□□□□ -0.33
PTPN20-225ENST00000511769 USHBP1Q8N6Y0 703 aa13.01□□□□□ -0.33
PTPN20-225ENST00000511769 RAPGEF4Q8WZA2 1011 aa13.01□□□□□ -0.33
PTPN20-225ENST00000511769 FLT4P35916 1363 aa13.01□□□□□ -0.33
PTPN20-225ENST00000511769 HSP90AB2PQ58FF8 381 aa13□□□□□ -0.33
PTPN20-225ENST00000511769 MAP1SQ66K74 1059 aaPredicted RBP13□□□□□ -0.33
PTPN20-225ENST00000511769 NEFMP07197 916 aa12.99□□□□□ -0.33
PTPN20-225ENST00000511769 TATP17735 454 aaPredicted RBP12.99□□□□□ -0.33
PTPN20-225ENST00000511769 HOXC9P31274 260 aa12.99□□□□□ -0.33
PTPN20-225ENST00000511769 IL13P35225 146 aa12.99□□□□□ -0.33
PTPN20-225ENST00000511769 FXR1P51114 621 aaKnown RBP eCLIP12.99□□□□□ -0.33
PTPN20-225ENST00000511769 CNTROBQ8N137 903 aa12.99□□□□□ -0.33
PTPN20-225ENST00000511769 TTLL6Q8N841 843 aa12.99□□□□□ -0.33
PTPN20-225ENST00000511769 COL3A1P02461 1466 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms