RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 HOXB7P09629 217 aa11.69□□□□□ -0.54
NR1I3-228ENST00000511676 EXOSC9Q06265 439 aaKnown RBP11.69□□□□□ -0.54
NR1I3-228ENST00000511676 TAF7Q15545 349 aaPredicted RBP11.69□□□□□ -0.54
NR1I3-228ENST00000511676 ZNF827Q17R98 1081 aa11.69□□□□□ -0.54
NR1I3-228ENST00000511676 TSR2Q969E8 191 aaKnown RBP11.69□□□□□ -0.54
NR1I3-228ENST00000511676 SSFA2P28290 1259 aa11.68□□□□□ -0.54
NR1I3-228ENST00000511676 MPRIPQ6WCQ1 1025 aa11.68□□□□□ -0.54
NR1I3-228ENST00000511676 MCM10Q7L590 875 aa11.68□□□□□ -0.54
NR1I3-228ENST00000511676 IFNL2Q8IZJ0 200 aa11.68□□□□□ -0.54
NR1I3-228ENST00000511676 IL17REQ8NFR9 667 aa11.68□□□□□ -0.54
NR1I3-228ENST00000511676 GPBP1L1Q9HC44 474 aaPredicted RBP11.68□□□□□ -0.54
NR1I3-228ENST00000511676 QSER1Q2KHR3 1735 aa11.67□□□□□ -0.54
NR1I3-228ENST00000511676 DCAF5Q96JK2 942 aa11.67□□□□□ -0.54
NR1I3-228ENST00000511676 THUMPD2Q9BTF0 503 aaKnown RBP11.67□□□□□ -0.54
NR1I3-228ENST00000511676 PPP4R2Q9NY27 417 aa11.67□□□□□ -0.54
NR1I3-228ENST00000511676 TMOD3Q9NYL9 352 aa11.67□□□□□ -0.54
NR1I3-228ENST00000511676 BTAF1O14981 1849 aa11.67□□□□□ -0.54
NR1I3-228ENST00000511676 IPO8O15397 1037 aaKnown RBP11.66□□□□□ -0.54
NR1I3-228ENST00000511676 RNMTO43148 476 aaKnown RBP11.66□□□□□ -0.54
NR1I3-228ENST00000511676 VAMP4O75379 141 aa11.66□□□□□ -0.54
NR1I3-228ENST00000511676 PHKG2P15735 406 aa11.66□□□□□ -0.54
NR1I3-228ENST00000511676 TEFQ10587 303 aa11.66□□□□□ -0.54
NR1I3-228ENST00000511676 DCTN1Q14203 1278 aa11.66□□□□□ -0.54
NR1I3-228ENST00000511676 NKX1-1Q15270 411 aaPredicted RBP11.66□□□□□ -0.54
NR1I3-228ENST00000511676 TWISTNBQ3B726 338 aaPredicted RBP11.66□□□□□ -0.54
NR1I3-228ENST00000511676 NLGN1Q8N2Q7 840 aa11.66□□□□□ -0.54
NR1I3-228ENST00000511676 ARHGAP45Q92619 1136 aa11.66□□□□□ -0.54
NR1I3-228ENST00000511676 TSPYL4Q9UJ04 414 aa11.66□□□□□ -0.54
NR1I3-228ENST00000511676 KDM3BQ7LBC6 1761 aa11.66□□□□□ -0.54
NR1I3-228ENST00000511676 SIPA1L3O60292 1781 aaPredicted RBP11.65□□□□□ -0.54
NR1I3-228ENST00000511676 C1QBPQ07021 282 aaKnown RBP11.65□□□□□ -0.54
NR1I3-228ENST00000511676 COL23A1Q86Y22 540 aaPredicted RBP11.65□□□□□ -0.54
NR1I3-228ENST00000511676 PALLDQ8WX93 1383 aa11.65□□□□□ -0.55
NR1I3-228ENST00000511676 SCN11AQ9UI33 1791 aa11.64□□□□□ -0.55
NR1I3-228ENST00000511676 KDM6AO15550 1401 aaPredicted RBP11.64□□□□□ -0.55
NR1I3-228ENST00000511676 TGFB2P61812 414 aa11.64□□□□□ -0.55
NR1I3-228ENST00000511676 SMC4Q9NTJ3 1288 aa11.64□□□□□ -0.55
NR1I3-228ENST00000511676 LAS1LQ9Y4W2 734 aaKnown RBP11.64□□□□□ -0.55
NR1I3-228ENST00000511676 ERVV-2B6SEH9 535 aa11.63□□□□□ -0.55
NR1I3-228ENST00000511676 CAPN15O75808 1086 aa11.63□□□□□ -0.55
NR1I3-228ENST00000511676 BCAR3O75815 825 aa11.63□□□□□ -0.55
NR1I3-228ENST00000511676 TRAPPC3LQ5T215 181 aa11.63□□□□□ -0.55
NR1I3-228ENST00000511676 ZKSCAN2Q63HK3 967 aa11.63□□□□□ -0.55
NR1I3-228ENST00000511676 SSH1Q8WYL5 1049 aa11.63□□□□□ -0.55
NR1I3-228ENST00000511676 RTCBQ9Y3I0 505 aaKnown RBP11.63□□□□□ -0.55
NR1I3-228ENST00000511676 PAPPAQ13219 1627 aa11.63□□□□□ -0.55
NR1I3-228ENST00000511676 HEG1Q9ULI3 1381 aa11.63□□□□□ -0.55
NR1I3-228ENST00000511676 LOC102724428A0A0B4J2F2 783 aa11.62□□□□□ -0.55
NR1I3-228ENST00000511676 CYP27B1O15528 508 aa11.62□□□□□ -0.55
NR1I3-228ENST00000511676 SIK1P57059 783 aa11.62□□□□□ -0.55
NR1I3-228ENST00000511676 CHMP4BQ9H444 224 aaKnown RBP11.62□□□□□ -0.55
NR1I3-228ENST00000511676 SLC52A2Q9HAB3 445 aa11.62□□□□□ -0.55
NR1I3-228ENST00000511676 SHANK3Q9BYB0 1731 aa11.61□□□□□ -0.55
NR1I3-228ENST00000511676 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.61□□□□□ -0.55
NR1I3-228ENST00000511676 CANXP27824 592 aaKnown RBP11.61□□□□□ -0.55
NR1I3-228ENST00000511676 ATP6V1AP38606 617 aa11.61□□□□□ -0.55
NR1I3-228ENST00000511676 RC3H1Q5TC82 1133 aaKnown RBP11.61□□□□□ -0.55
NR1I3-228ENST00000511676 ATF7IPQ6VMQ6 1270 aa11.61□□□□□ -0.55
NR1I3-228ENST00000511676 C8orf58Q8NAV2 365 aa11.61□□□□□ -0.55
NR1I3-228ENST00000511676 PTPRCP08575 1304 aa11.6□□□□□ -0.55
NR1I3-228ENST00000511676 BTBD11A6QL63 1104 aa11.6□□□□□ -0.55
NR1I3-228ENST00000511676 CCDC30Q5VVM6 783 aa11.6□□□□□ -0.55
NR1I3-228ENST00000511676 MRPL50Q8N5N7 158 aaKnown RBP11.6□□□□□ -0.55
NR1I3-228ENST00000511676 API5Q9BZZ5 524 aaKnown RBP11.6□□□□□ -0.55
NR1I3-228ENST00000511676 LGR6Q9HBX8 967 aa11.6□□□□□ -0.55
NR1I3-228ENST00000511676 CCDC87Q9NVE4 849 aa11.6□□□□□ -0.55
NR1I3-228ENST00000511676 UTRNP46939 3433 aa11.6□□□□□ -0.55
NR1I3-228ENST00000511676 RFC4P35249 363 aa11.59□□□□□ -0.55
NR1I3-228ENST00000511676 EIF4A1P60842 406 aaKnown RBP11.59□□□□□ -0.55
NR1I3-228ENST00000511676 DZIP1LQ8IYY4 767 aaKnown RBP11.59□□□□□ -0.55
NR1I3-228ENST00000511676 TSPYL6Q8N831 410 aa11.59□□□□□ -0.55
NR1I3-228ENST00000511676 PIGBQ92521 554 aa11.59□□□□□ -0.55
NR1I3-228ENST00000511676 PARP3Q9Y6F1 533 aa11.59□□□□□ -0.55
NR1I3-228ENST00000511676 VIRMAQ69YN4 1812 aaKnown RBP11.58□□□□□ -0.56
NR1I3-228ENST00000511676 LY75O60449 1722 aa11.58□□□□□ -0.56
NR1I3-228ENST00000511676 PLIN1O60240 522 aa11.58□□□□□ -0.56
NR1I3-228ENST00000511676 C16orf71Q8IYS4 520 aaPredicted RBP11.58□□□□□ -0.56
NR1I3-228ENST00000511676 NLGN2Q8NFZ4 835 aa11.58□□□□□ -0.56
NR1I3-228ENST00000511676 STK31Q9BXU1 1019 aa11.58□□□□□ -0.56
NR1I3-228ENST00000511676 PXDNLA1KZ92 1463 aa11.57□□□□□ -0.56
NR1I3-228ENST00000511676 GNPATO15228 680 aa11.57□□□□□ -0.56
NR1I3-228ENST00000511676 PHF14O94880 888 aa11.57□□□□□ -0.56
NR1I3-228ENST00000511676 TRIM27P14373 513 aa11.57□□□□□ -0.56
NR1I3-228ENST00000511676 HSPA6P17066 643 aa11.57□□□□□ -0.56
NR1I3-228ENST00000511676 APLP1P51693 650 aa11.57□□□□□ -0.56
NR1I3-228ENST00000511676 CABP4P57796 275 aa11.57□□□□□ -0.56
NR1I3-228ENST00000511676 ZNF790Q6PG37 636 aa11.57□□□□□ -0.56
NR1I3-228ENST00000511676 FTSJ3Q8IY81 847 aaKnown RBP11.57□□□□□ -0.56
NR1I3-228ENST00000511676 FRAT1Q92837 279 aaPredicted RBP11.57□□□□□ -0.56
NR1I3-228ENST00000511676 DDX19BQ9UMR2 479 aa11.57□□□□□ -0.56
NR1I3-228ENST00000511676 CACNA1FO60840 1977 aa11.57□□□□□ -0.56
NR1I3-228ENST00000511676 ABCC4O15439 1325 aa11.57□□□□□ -0.56
NR1I3-228ENST00000511676 IBTKQ9P2D0 1353 aaPredicted RBP11.56□□□□□ -0.56
NR1I3-228ENST00000511676 KCNQ4P56696 695 aa11.56□□□□□ -0.56
NR1I3-228ENST00000511676 IRX6P78412 446 aaPredicted RBP11.56□□□□□ -0.56
NR1I3-228ENST00000511676 MVPQ14764 893 aaKnown RBP11.56□□□□□ -0.56
NR1I3-228ENST00000511676 COL24A1Q17RW2 1714 aa11.56□□□□□ -0.56
NR1I3-228ENST00000511676 IFFO2Q5TF58 517 aa11.56□□□□□ -0.56
NR1I3-228ENST00000511676 MSL1Q68DK7 614 aa11.56□□□□□ -0.56
NR1I3-228ENST00000511676 NPM2Q86SE8 214 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms