RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 MX1P20591 662 aa8.65□□□□□ -1.02
CPNE4-208ENST00000511604 OAS2P29728 719 aaKnown RBP8.65□□□□□ -1.02
CPNE4-208ENST00000511604 ERCC6LQ2NKX8 1250 aa8.65□□□□□ -1.02
CPNE4-208ENST00000511604 ZSCAN25Q6NSZ9 544 aa8.65□□□□□ -1.02
CPNE4-208ENST00000511604 TBC1D22AQ8WUA7 517 aa8.65□□□□□ -1.02
CPNE4-208ENST00000511604 EXOC4Q96A65 974 aa8.65□□□□□ -1.02
CPNE4-208ENST00000511604 NRBP1Q9UHY1 535 aa8.65□□□□□ -1.02
CPNE4-208ENST00000511604 ADCY10Q96PN6 1610 aa8.65□□□□□ -1.02
CPNE4-208ENST00000511604 PLB1Q6P1J6 1458 aa8.65□□□□□ -1.03
CPNE4-208ENST00000511604 ST18O60284 1047 aa8.64□□□□□ -1.03
CPNE4-208ENST00000511604 LMAN1P49257 510 aa8.64□□□□□ -1.03
CPNE4-208ENST00000511604 CORO7P57737 925 aa8.64□□□□□ -1.03
CPNE4-208ENST00000511604 TMCO3Q6UWJ1 677 aa8.64□□□□□ -1.03
CPNE4-208ENST00000511604 ITFG2Q969R8 447 aa8.64□□□□□ -1.03
CPNE4-208ENST00000511604 FUCA2Q9BTY2 467 aa8.64□□□□□ -1.03
CPNE4-208ENST00000511604 ZSCAN16Q9H4T2 348 aaPredicted RBP8.64□□□□□ -1.03
CPNE4-208ENST00000511604 NUP153P49790 1475 aaKnown RBP8.64□□□□□ -1.03
CPNE4-208ENST00000511604 PTPN14Q15678 1187 aa8.64□□□□□ -1.03
CPNE4-208ENST00000511604 NYAP1Q6ZVC0 841 aa8.64□□□□□ -1.03
CPNE4-208ENST00000511604 OTUD6BQ8N6M0 293 aa8.64□□□□□ -1.03
CPNE4-208ENST00000511604 CCDC171Q6TFL3 1326 aa8.64□□□□□ -1.03
CPNE4-208ENST00000511604 ADAMTS12P58397 1594 aa8.64□□□□□ -1.03
CPNE4-208ENST00000511604 H0YHG0 523 aa8.63□□□□□ -1.03
CPNE4-208ENST00000511604 KIF2AO00139 706 aaPredicted RBP8.63□□□□□ -1.03
CPNE4-208ENST00000511604 MPHOSPH10O00566 681 aaKnown RBP8.63□□□□□ -1.03
CPNE4-208ENST00000511604 CDC45O75419 566 aa8.63□□□□□ -1.03
CPNE4-208ENST00000511604 MTHFSP49914 203 aa8.63□□□□□ -1.03
CPNE4-208ENST00000511604 INHBEP58166 350 aa8.63□□□□□ -1.03
CPNE4-208ENST00000511604 SARNPP82979 210 aaKnown RBP8.63□□□□□ -1.03
CPNE4-208ENST00000511604 GIMAP6Q6P9H5 292 aa8.63□□□□□ -1.03
CPNE4-208ENST00000511604 LEKR1Q6ZMV7 388 aa8.63□□□□□ -1.03
CPNE4-208ENST00000511604 PLEKHM2Q8IWE5 1019 aa8.63□□□□□ -1.03
CPNE4-208ENST00000511604 PTPRGP23470 1445 aa8.63□□□□□ -1.03
CPNE4-208ENST00000511604 IQSEC2Q5JU85 1478 aa8.63□□□□□ -1.03
CPNE4-208ENST00000511604 LIG1P18858 919 aa8.63□□□□□ -1.03
CPNE4-208ENST00000511604 SCP2P22307 547 aa8.63□□□□□ -1.03
CPNE4-208ENST00000511604 DNAAF4Q8WXU2 420 aa8.63□□□□□ -1.03
CPNE4-208ENST00000511604 TMX3Q96JJ7 454 aa8.63□□□□□ -1.03
CPNE4-208ENST00000511604 ARGLU1Q9NWB6 273 aaPredicted RBP8.63□□□□□ -1.03
CPNE4-208ENST00000511604 ADAM21Q9UKJ8 722 aa8.63□□□□□ -1.03
CPNE4-208ENST00000511604 C9orf84Q5VXU9 1444 aa8.63□□□□□ -1.03
CPNE4-208ENST00000511604 ATP10AO60312 1499 aa8.62□□□□□ -1.03
CPNE4-208ENST00000511604 APBB1O00213 710 aa8.62□□□□□ -1.03
CPNE4-208ENST00000511604 ZBTB7BO15156 539 aaPredicted RBP8.62□□□□□ -1.03
CPNE4-208ENST00000511604 ATP8B1O43520 1251 aa8.62□□□□□ -1.03
CPNE4-208ENST00000511604 SMC2O95347 1197 aa8.62□□□□□ -1.03
CPNE4-208ENST00000511604 SETQ01105 290 aaPredicted RBP8.62□□□□□ -1.03
CPNE4-208ENST00000511604 SPAG9O60271 1321 aaKnown RBP8.62□□□□□ -1.03
CPNE4-208ENST00000511604 TPM1P09493 284 aa8.62□□□□□ -1.03
CPNE4-208ENST00000511604 SMC1AQ14683 1233 aaKnown RBP8.62□□□□□ -1.03
CPNE4-208ENST00000511604 ARHGAP29Q52LW3 1261 aa8.62□□□□□ -1.03
CPNE4-208ENST00000511604 PDRG1Q9NUG6 133 aa8.62□□□□□ -1.03
CPNE4-208ENST00000511604 TRIM35Q9UPQ4 493 aa8.62□□□□□ -1.03
CPNE4-208ENST00000511604 SYNMO15061 1565 aa8.62□□□□□ -1.03
CPNE4-208ENST00000511604 ELP1O95163 1332 aa8.61□□□□□ -1.03
CPNE4-208ENST00000511604 USP27XA6NNY8 438 aa8.61□□□□□ -1.03
CPNE4-208ENST00000511604 SOCS7O14512 581 aa8.61□□□□□ -1.03
CPNE4-208ENST00000511604 MNAT1P51948 309 aa8.61□□□□□ -1.03
CPNE4-208ENST00000511604 ZC3H12AQ5D1E8 599 aaKnown RBP8.61□□□□□ -1.03
CPNE4-208ENST00000511604 FILIP1Q7Z7B0 1213 aa8.61□□□□□ -1.03
CPNE4-208ENST00000511604 DRC7Q8IY82 874 aa8.61□□□□□ -1.03
CPNE4-208ENST00000511604 EFCAB13Q8IY85 973 aa8.61□□□□□ -1.03
CPNE4-208ENST00000511604 CACTINQ8WUQ7 758 aaKnown RBP8.61□□□□□ -1.03
CPNE4-208ENST00000511604 ZNF428Q96B54 188 aa8.61□□□□□ -1.03
CPNE4-208ENST00000511604 FAXDC2Q96IV6 333 aa8.61□□□□□ -1.03
CPNE4-208ENST00000511604 LARP6Q9BRS8 491 aaKnown RBP8.61□□□□□ -1.03
CPNE4-208ENST00000511604 CNPY2Q9Y2B0 182 aa8.61□□□□□ -1.03
CPNE4-208ENST00000511604 POLR3AO14802 1390 aaPredicted RBP8.61□□□□□ -1.03
CPNE4-208ENST00000511604 C21orf2O43822 256 aa8.61□□□□□ -1.03
CPNE4-208ENST00000511604 RPS6KA5O75582 802 aa8.61□□□□□ -1.03
CPNE4-208ENST00000511604 U2AF1L5P0DN76 240 aaPredicted RBP8.61□□□□□ -1.03
CPNE4-208ENST00000511604 CASTP20810 708 aaKnown RBP8.61□□□□□ -1.03
CPNE4-208ENST00000511604 U2AF1Q01081 240 aaKnown RBP eCLIP8.61□□□□□ -1.03
CPNE4-208ENST00000511604 ZRSR1Q15695 479 aaKnown RBP8.61□□□□□ -1.03
CPNE4-208ENST00000511604 MORC1Q86VD1 984 aa8.61□□□□□ -1.03
CPNE4-208ENST00000511604 L2HGDHQ9H9P8 463 aa8.61□□□□□ -1.03
CPNE4-208ENST00000511604 MRVI1Q9Y6F6 885 aa8.61□□□□□ -1.03
CPNE4-208ENST00000511604 AATKQ6ZMQ8 1374 aa8.61□□□□□ -1.03
CPNE4-208ENST00000511604 ARID4AP29374 1257 aaPredicted RBP8.6□□□□□ -1.03
CPNE4-208ENST00000511604 NEK4P51957 841 aa8.6□□□□□ -1.03
CPNE4-208ENST00000511604 TTC19Q6DKK2 380 aaPredicted RBP8.6□□□□□ -1.03
CPNE4-208ENST00000511604 TTLL5Q6EMB2 1281 aa8.6□□□□□ -1.03
CPNE4-208ENST00000511604 FOXR1Q6PIV2 292 aa8.6□□□□□ -1.03
CPNE4-208ENST00000511604 TADA2BQ86TJ2 420 aa8.6□□□□□ -1.03
CPNE4-208ENST00000511604 LRRN4CLQ8ND94 238 aa8.6□□□□□ -1.03
CPNE4-208ENST00000511604 MIEF2Q96C03 454 aa8.6□□□□□ -1.03
CPNE4-208ENST00000511604 TACO1Q9BSH4 297 aaKnown RBP8.6□□□□□ -1.03
CPNE4-208ENST00000511604 PALD1Q9ULE6 856 aa8.6□□□□□ -1.03
CPNE4-208ENST00000511604 ELL2O00472 640 aaPredicted RBP8.6□□□□□ -1.03
CPNE4-208ENST00000511604 SASH3O75995 380 aa8.6□□□□□ -1.03
CPNE4-208ENST00000511604 TBC1D8O95759 1140 aa8.6□□□□□ -1.03
CPNE4-208ENST00000511604 TSPY4P0CV99 314 aa8.6□□□□□ -1.03
CPNE4-208ENST00000511604 TSPY10P0CW01 314 aa8.6□□□□□ -1.03
CPNE4-208ENST00000511604 ARID5BQ14865 1188 aa8.6□□□□□ -1.03
CPNE4-208ENST00000511604 NAIF1Q69YI7 327 aaPredicted RBP8.6□□□□□ -1.03
CPNE4-208ENST00000511604 TMEM87AQ8NBN3 555 aa8.6□□□□□ -1.03
CPNE4-208ENST00000511604 SYTL4Q96C24 671 aaPredicted RBP8.6□□□□□ -1.03
CPNE4-208ENST00000511604 NBPF3Q9H094 633 aa8.6□□□□□ -1.03
CPNE4-208ENST00000511604 SLC12A5Q9H2X9 1139 aa8.6□□□□□ -1.03
CPNE4-208ENST00000511604 NOS1P29475 1434 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms