RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 GTF3C3Q9Y5Q9 886 aa3.65□□□□□ -1.82
CLOCK-209ENST00000511124 RNF123Q5XPI4 1314 aa3.65□□□□□ -1.82
CLOCK-209ENST00000511124 MARF1Q9Y4F3 1742 aaKnown RBP3.65□□□□□ -1.83
CLOCK-209ENST00000511124 TNNI2P48788 182 aa3.65□□□□□ -1.83
CLOCK-209ENST00000511124 PKN2Q16513 984 aaKnown RBP3.65□□□□□ -1.83
CLOCK-209ENST00000511124 NME9Q86XW9 330 aa3.65□□□□□ -1.83
CLOCK-209ENST00000511124 SULF1Q8IWU6 871 aa3.65□□□□□ -1.83
CLOCK-209ENST00000511124 MARCH10Q8NA82 808 aaPredicted RBP3.65□□□□□ -1.83
CLOCK-209ENST00000511124 IL27Q8NEV9 243 aa3.65□□□□□ -1.83
CLOCK-209ENST00000511124 GGNBP2Q9H3C7 697 aa3.65□□□□□ -1.83
CLOCK-209ENST00000511124 RBM27Q9P2N5 1060 aaKnown RBP3.65□□□□□ -1.83
CLOCK-209ENST00000511124 PLEKHH1Q9ULM0 1364 aa3.65□□□□□ -1.83
CLOCK-209ENST00000511124 FRAT2O75474 233 aaPredicted RBP3.64□□□□□ -1.83
CLOCK-209ENST00000511124 SNRPA1P09661 255 aaKnown RBP3.64□□□□□ -1.83
CLOCK-209ENST00000511124 FKBP8Q14318 412 aa3.64□□□□□ -1.83
CLOCK-209ENST00000511124 ARMC9Q7Z3E5 817 aa3.64□□□□□ -1.83
CLOCK-209ENST00000511124 IFNLR1Q8IU57 520 aaPredicted RBP3.64□□□□□ -1.83
CLOCK-209ENST00000511124 NECTIN2Q92692 538 aa3.64□□□□□ -1.83
CLOCK-209ENST00000511124 TRIM34Q9BYJ4 488 aa3.64□□□□□ -1.83
CLOCK-209ENST00000511124 CNTNAP4Q9C0A0 1308 aa3.64□□□□□ -1.83
CLOCK-209ENST00000511124 ERBB4Q15303 1308 aa3.64□□□□□ -1.83
CLOCK-209ENST00000511124 GNAT3A8MTJ3 354 aa3.64□□□□□ -1.83
CLOCK-209ENST00000511124 PTCD1O75127 700 aaKnown RBP3.64□□□□□ -1.83
CLOCK-209ENST00000511124 U2AF1L5P0DN76 240 aaPredicted RBP3.64□□□□□ -1.83
CLOCK-209ENST00000511124 U2AF1Q01081 240 aaKnown RBP eCLIP3.64□□□□□ -1.83
CLOCK-209ENST00000511124 FAM182BQ5T319 152 aa3.64□□□□□ -1.83
CLOCK-209ENST00000511124 MSL1Q68DK7 614 aa3.64□□□□□ -1.83
CLOCK-209ENST00000511124 STYK1Q6J9G0 422 aa3.64□□□□□ -1.83
CLOCK-209ENST00000511124 CLEC4GQ6UXB4 293 aa3.64□□□□□ -1.83
CLOCK-209ENST00000511124 SLF2Q8IX21 1173 aa3.64□□□□□ -1.83
CLOCK-209ENST00000511124 CDC5LQ99459 802 aaKnown RBP3.64□□□□□ -1.83
CLOCK-209ENST00000511124 BRIP1Q9BX63 1249 aa3.64□□□□□ -1.83
CLOCK-209ENST00000511124 PRDM10Q9NQV6 1147 aa3.64□□□□□ -1.83
CLOCK-209ENST00000511124 CD163L1Q9NR16 1453 aa3.64□□□□□ -1.83
CLOCK-209ENST00000511124 SLC12A5Q9H2X9 1139 aa3.64□□□□□ -1.83
CLOCK-209ENST00000511124 COL22A1Q8NFW1 1626 aaPredicted RBP3.64□□□□□ -1.83
CLOCK-209ENST00000511124 STRCP1A6NGW2 1772 aa3.64□□□□□ -1.83
CLOCK-209ENST00000511124 CANXP27824 592 aaKnown RBP3.63□□□□□ -1.83
CLOCK-209ENST00000511124 EIF5P55010 431 aaKnown RBP3.63□□□□□ -1.83
CLOCK-209ENST00000511124 SREBF2Q12772 1141 aa3.63□□□□□ -1.83
CLOCK-209ENST00000511124 TNFAIP1Q13829 316 aa3.63□□□□□ -1.83
CLOCK-209ENST00000511124 DEFB115Q30KQ5 88 aa3.63□□□□□ -1.83
CLOCK-209ENST00000511124 HOMEZQ8IX15 550 aa3.63□□□□□ -1.83
CLOCK-209ENST00000511124 MYH16Q9H6N6 1097 aa3.63□□□□□ -1.83
CLOCK-209ENST00000511124 NR2E3Q9Y5X4 410 aa3.63□□□□□ -1.83
CLOCK-209ENST00000511124 SERPINB2P05120 415 aa3.63□□□□□ -1.83
CLOCK-209ENST00000511124 NOGQ13253 232 aa3.63□□□□□ -1.83
CLOCK-209ENST00000511124 NBPF11Q86T75 865 aa3.63□□□□□ -1.83
CLOCK-209ENST00000511124 ZC3H12CQ9C0D7 883 aaKnown RBP3.63□□□□□ -1.83
CLOCK-209ENST00000511124 SPDYE2BA6NHP3 402 aa3.63□□□□□ -1.83
CLOCK-209ENST00000511124 TMEM88BA6NKF7 163 aa3.63□□□□□ -1.83
CLOCK-209ENST00000511124 SPDYE6P0CI01 402 aa3.63□□□□□ -1.83
CLOCK-209ENST00000511124 IL6STP40189 918 aaPredicted RBP3.63□□□□□ -1.83
CLOCK-209ENST00000511124 SPDYE2Q495Y8 402 aa3.63□□□□□ -1.83
CLOCK-209ENST00000511124 GNL3LQ9NVN8 582 aaKnown RBP3.63□□□□□ -1.83
CLOCK-209ENST00000511124 BABAM1Q9NWV8 329 aa3.63□□□□□ -1.83
CLOCK-209ENST00000511124 NARFQ9UHQ1 456 aa3.63□□□□□ -1.83
CLOCK-209ENST00000511124 GJA3Q9Y6H8 435 aa3.63□□□□□ -1.83
CLOCK-209ENST00000511124 ATP10DQ9P241 1426 aa3.63□□□□□ -1.83
CLOCK-209ENST00000511124 PRR36Q9H6K5 1346 aa3.63□□□□□ -1.83
CLOCK-209ENST00000511124 CAPN15O75808 1086 aa3.63□□□□□ -1.83
CLOCK-209ENST00000511124 BBOX1O75936 387 aa3.63□□□□□ -1.83
CLOCK-209ENST00000511124 MLLT1Q03111 559 aaPredicted RBP3.63□□□□□ -1.83
CLOCK-209ENST00000511124 SULT6B1Q6IMI4 303 aa3.63□□□□□ -1.83
CLOCK-209ENST00000511124 ANKRD13DQ6ZTN6 518 aa3.63□□□□□ -1.83
CLOCK-209ENST00000511124 VPS37DQ86XT2 251 aa3.63□□□□□ -1.83
CLOCK-209ENST00000511124 COL5A2P05997 1499 aaPredicted RBP3.63□□□□□ -1.83
CLOCK-209ENST00000511124 TRPM1Q7Z4N2 1603 aa3.62□□□□□ -1.83
CLOCK-209ENST00000511124 KNDC1Q76NI1 1749 aa3.62□□□□□ -1.83
CLOCK-209ENST00000511124 CDHR2Q9BYE9 1310 aa3.62□□□□□ -1.83
CLOCK-209ENST00000511124 GLTPD2A6NH11 291 aa3.62□□□□□ -1.83
CLOCK-209ENST00000511124 BTBD11A6QL63 1104 aa3.62□□□□□ -1.83
CLOCK-209ENST00000511124 PPP1R12BO60237 982 aaPredicted RBP3.62□□□□□ -1.83
CLOCK-209ENST00000511124 ABCB7O75027 752 aa3.62□□□□□ -1.83
CLOCK-209ENST00000511124 RPS12P25398 132 aaKnown RBP3.62□□□□□ -1.83
CLOCK-209ENST00000511124 IGHMBP2P38935 993 aaKnown RBP3.62□□□□□ -1.83
CLOCK-209ENST00000511124 GRM1Q13255 1194 aa3.62□□□□□ -1.83
CLOCK-209ENST00000511124 TMEM132AQ24JP5 1023 aa3.62□□□□□ -1.83
CLOCK-209ENST00000511124 SUPT20HL1Q3ZLR7 823 aa3.62□□□□□ -1.83
CLOCK-209ENST00000511124 DZIP3Q86Y13 1208 aaKnown RBP3.62□□□□□ -1.83
CLOCK-209ENST00000511124 AMOTL1Q8IY63 956 aa3.62□□□□□ -1.83
CLOCK-209ENST00000511124 KLRG1Q96E93 195 aa3.62□□□□□ -1.83
CLOCK-209ENST00000511124 RREB1Q92766 1687 aa3.62□□□□□ -1.83
CLOCK-209ENST00000511124 MYO3BQ8WXR4 1341 aa3.62□□□□□ -1.83
CLOCK-209ENST00000511124 MAP2K2P36507 400 aa3.62□□□□□ -1.83
CLOCK-209ENST00000511124 CCDC174Q6PII3 467 aa3.62□□□□□ -1.83
CLOCK-209ENST00000511124 FMN2Q9NZ56 1722 aa3.62□□□□□ -1.83
CLOCK-209ENST00000511124 CARMIL3Q8ND23 1372 aa3.62□□□□□ -1.83
CLOCK-209ENST00000511124 SOS1Q07889 1333 aaPredicted RBP3.62□□□□□ -1.83
CLOCK-209ENST00000511124 C6orf229H3BNL8 230 aa3.62□□□□□ -1.83
CLOCK-209ENST00000511124 PPIP5K2O43314 1243 aa3.62□□□□□ -1.83
CLOCK-209ENST00000511124 INHBEP58166 350 aa3.62□□□□□ -1.83
CLOCK-209ENST00000511124 FKBP1BP68106 108 aa3.62□□□□□ -1.83
CLOCK-209ENST00000511124 PABPC4Q13310 644 aaKnown RBP eCLIP3.62□□□□□ -1.83
CLOCK-209ENST00000511124 INTS3Q68E01 1043 aaKnown RBP3.62□□□□□ -1.83
CLOCK-209ENST00000511124 CIAPIN1Q6FI81 312 aa3.62□□□□□ -1.83
CLOCK-209ENST00000511124 USP50Q70EL3 339 aaPredicted RBP3.62□□□□□ -1.83
CLOCK-209ENST00000511124 CDC37L1Q7L3B6 337 aa3.62□□□□□ -1.83
CLOCK-209ENST00000511124 NFATC2IPQ8NCF5 419 aa3.62□□□□□ -1.83
CLOCK-209ENST00000511124 RSPH6AQ9H0K4 717 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms