RNA–Protein interactions for RNA: ENST00000511067.2

CHD1-206, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-206ENST00000511067 TSEN34Q9BSV6 310 aaKnown RBP9.69□□□□□ -0.86
CHD1-206ENST00000511067 SENP2Q9HC62 589 aa9.69□□□□□ -0.86
CHD1-206ENST00000511067 H3BRB1 525 aa9.68□□□□□ -0.86
CHD1-206ENST00000511067 MEN1O00255 615 aa9.68□□□□□ -0.86
CHD1-206ENST00000511067 CAPN5O15484 640 aaPredicted RBP9.68□□□□□ -0.86
CHD1-206ENST00000511067 PPARGC1BQ86YN6 1023 aaKnown RBP9.68□□□□□ -0.86
CHD1-206ENST00000511067 GLYCTKQ8IVS8 523 aa9.68□□□□□ -0.86
CHD1-206ENST00000511067 CHMP7Q8WUX9 453 aaPredicted RBP9.68□□□□□ -0.86
CHD1-206ENST00000511067 TUT1Q9H6E5 874 aaKnown RBP9.68□□□□□ -0.86
CHD1-206ENST00000511067 DNMT3AQ9Y6K1 912 aaPredicted RBP9.68□□□□□ -0.86
CHD1-206ENST00000511067 ERCC3P19447 782 aa9.67□□□□□ -0.86
CHD1-206ENST00000511067 FKBP4Q02790 459 aaKnown RBP eCLIP9.67□□□□□ -0.86
CHD1-206ENST00000511067 ZNF211Q13398 564 aaPredicted RBP9.67□□□□□ -0.86
CHD1-206ENST00000511067 TEAD4Q15561 434 aa9.67□□□□□ -0.86
CHD1-206ENST00000511067 CAPN12Q6ZSI9 719 aa9.67□□□□□ -0.86
CHD1-206ENST00000511067 ZSCAN10Q96SZ4 725 aaPredicted RBP9.67□□□□□ -0.86
CHD1-206ENST00000511067 GTF2E1P29083 439 aaPredicted RBP9.66□□□□□ -0.86
CHD1-206ENST00000511067 TBCELQ5QJ74 424 aa9.66□□□□□ -0.86
CHD1-206ENST00000511067 ZNF295-AS1Q8N0V1 137 aa9.66□□□□□ -0.86
CHD1-206ENST00000511067 BIN2Q9UBW5 565 aaPredicted RBP9.66□□□□□ -0.86
CHD1-206ENST00000511067 USP3Q9Y6I4 520 aa9.66□□□□□ -0.86
CHD1-206ENST00000511067 SERTM1A2A2V5 107 aa9.65□□□□□ -0.86
CHD1-206ENST00000511067 NPR3P17342 541 aa9.65□□□□□ -0.86
CHD1-206ENST00000511067 C16orf46Q6P387 395 aa9.65□□□□□ -0.86
CHD1-206ENST00000511067 RHBDD1Q8TEB9 315 aa9.65□□□□□ -0.86
CHD1-206ENST00000511067 MYO19Q96H55 970 aa9.65□□□□□ -0.86
CHD1-206ENST00000511067 TRIM47Q96LD4 638 aa9.65□□□□□ -0.86
CHD1-206ENST00000511067 EML1O00423 815 aa9.64□□□□□ -0.87
CHD1-206ENST00000511067 SPINT1O43278 529 aa9.64□□□□□ -0.87
CHD1-206ENST00000511067 UPP2O95045 317 aa9.64□□□□□ -0.87
CHD1-206ENST00000511067 RNF144AP50876 292 aaPredicted RBP9.64□□□□□ -0.87
CHD1-206ENST00000511067 NPM2Q86SE8 214 aaKnown RBP9.64□□□□□ -0.87
CHD1-206ENST00000511067 KIFC2Q96AC6 838 aa9.64□□□□□ -0.87
CHD1-206ENST00000511067 NIFKQ9BYG3 293 aaKnown RBP9.64□□□□□ -0.87
CHD1-206ENST00000511067 ZNF395Q9H8N7 513 aaPredicted RBP9.64□□□□□ -0.87
CHD1-206ENST00000511067 AMOTL2Q9Y2J4 779 aa9.64□□□□□ -0.87
CHD1-206ENST00000511067 FAM13AO94988 1023 aa9.63□□□□□ -0.87
CHD1-206ENST00000511067 NOS2P35228 1153 aa9.63□□□□□ -0.87
CHD1-206ENST00000511067 MARSP56192 900 aaKnown RBP9.63□□□□□ -0.87
CHD1-206ENST00000511067 NAA30Q147X3 362 aaPredicted RBP9.63□□□□□ -0.87
CHD1-206ENST00000511067 TMEM214Q6NUQ4 689 aaKnown RBP9.63□□□□□ -0.87
CHD1-206ENST00000511067 LINC00528Q8N1L1 170 aa9.63□□□□□ -0.87
CHD1-206ENST00000511067 GRIP2Q9C0E4 1043 aa9.63□□□□□ -0.87
CHD1-206ENST00000511067 ANO2Q9NQ90 1003 aa9.63□□□□□ -0.87
CHD1-206ENST00000511067 BMP1P13497 986 aa9.62□□□□□ -0.87
CHD1-206ENST00000511067 SNRPBP14678 240 aaKnown RBP9.62□□□□□ -0.87
CHD1-206ENST00000511067 ECM1Q16610 540 aa9.62□□□□□ -0.87
CHD1-206ENST00000511067 GNASQ5JWF2 1037 aa9.62□□□□□ -0.87
CHD1-206ENST00000511067 DNAJC14Q6Y2X3 702 aaPredicted RBP9.62□□□□□ -0.87
CHD1-206ENST00000511067 ZDHHC1Q8WTX9 485 aa9.62□□□□□ -0.87
CHD1-206ENST00000511067 QTRT2Q9H974 415 aaKnown RBP9.62□□□□□ -0.87
CHD1-206ENST00000511067 CABP1Q9NZU7 370 aa9.62□□□□□ -0.87
CHD1-206ENST00000511067 SLC27A3Q5K4L6 730 aa9.61□□□□□ -0.87
CHD1-206ENST00000511067 L3MBTL2Q969R5 705 aa9.61□□□□□ -0.87
CHD1-206ENST00000511067 ZNF232Q9UNY5 417 aa9.61□□□□□ -0.87
CHD1-206ENST00000511067 ARHGAP4P98171 946 aa9.6□□□□□ -0.87
CHD1-206ENST00000511067 MTMR3Q13615 1198 aa9.6□□□□□ -0.87
CHD1-206ENST00000511067 RTN1Q16799 776 aa9.6□□□□□ -0.87
CHD1-206ENST00000511067 COX20Q5RI15 118 aa9.6□□□□□ -0.87
CHD1-206ENST00000511067 INSM2Q96T92 566 aaPredicted RBP9.6□□□□□ -0.87
CHD1-206ENST00000511067 SAP130Q9H0E3 1048 aa9.6□□□□□ -0.87
CHD1-206ENST00000511067 SPATA31C2B4DYI2 1134 aa9.59□□□□□ -0.87
CHD1-206ENST00000511067 C1orf53Q5VUE5 145 aa9.59□□□□□ -0.87
CHD1-206ENST00000511067 TREML4Q6UXN2 200 aa9.59□□□□□ -0.87
CHD1-206ENST00000511067 TRIM46Q7Z4K8 759 aa9.59□□□□□ -0.87
CHD1-206ENST00000511067 POLMQ9NP87 494 aaPredicted RBP9.59□□□□□ -0.87
CHD1-206ENST00000511067 STIM2Q9P246 746 aa9.59□□□□□ -0.87
CHD1-206ENST00000511067 DCTN4Q9UJW0 460 aa9.59□□□□□ -0.87
CHD1-206ENST00000511067 TNFRSF10BO14763 440 aa9.58□□□□□ -0.88
CHD1-206ENST00000511067 FOXD4L5Q5VV16 416 aaPredicted RBP9.58□□□□□ -0.88
CHD1-206ENST00000511067 ALKBH2Q6NS38 261 aa9.58□□□□□ -0.88
CHD1-206ENST00000511067 MRPL14Q6P1L8 145 aaKnown RBP9.58□□□□□ -0.88
CHD1-206ENST00000511067 ALDH16A1Q8IZ83 802 aa9.58□□□□□ -0.88
CHD1-206ENST00000511067 ABTB2Q8N961 1025 aa9.58□□□□□ -0.88
CHD1-206ENST00000511067 FOXD4L4Q8WXT5 416 aaPredicted RBP9.58□□□□□ -0.88
CHD1-206ENST00000511067 MPSTP25325 297 aa9.57□□□□□ -0.88
CHD1-206ENST00000511067 WDR44Q5JSH3 913 aa9.57□□□□□ -0.88
CHD1-206ENST00000511067 SH3PXD2AQ5TCZ1 1133 aa9.57□□□□□ -0.88
CHD1-206ENST00000511067 ZDHHC3Q9NYG2 299 aa9.57□□□□□ -0.88
CHD1-206ENST00000511067 GPC6Q9Y625 555 aaPredicted RBP9.57□□□□□ -0.88
CHD1-206ENST00000511067 BMP2P12643 396 aa9.56□□□□□ -0.88
CHD1-206ENST00000511067 BRD2P25440 801 aaKnown RBP9.56□□□□□ -0.88
CHD1-206ENST00000511067 CTSOP43234 321 aaPredicted RBP9.56□□□□□ -0.88
CHD1-206ENST00000511067 RANGAP1P46060 587 aaPredicted RBP9.56□□□□□ -0.88
CHD1-206ENST00000511067 NBPF1Q3BBV0 1214 aa9.56□□□□□ -0.88
CHD1-206ENST00000511067 C4orf17Q53FE4 359 aa9.56□□□□□ -0.88
CHD1-206ENST00000511067 PHACTR1Q9C0D0 580 aa9.56□□□□□ -0.88
CHD1-206ENST00000511067 LRFN2Q9ULH4 789 aa9.56□□□□□ -0.88
CHD1-206ENST00000511067 WFS1O76024 890 aa9.55□□□□□ -0.88
CHD1-206ENST00000511067 MAPK1P28482 360 aa9.55□□□□□ -0.88
CHD1-206ENST00000511067 PLA2G4AP47712 749 aa9.55□□□□□ -0.88
CHD1-206ENST00000511067 SCARF1Q14162 830 aa9.55□□□□□ -0.88
CHD1-206ENST00000511067 HIF1AQ16665 826 aa9.55□□□□□ -0.88
CHD1-206ENST00000511067 C11orf91Q3C1V1 193 aa9.55□□□□□ -0.88
CHD1-206ENST00000511067 ZSCAN29Q8IWY8 852 aaPredicted RBP9.55□□□□□ -0.88
CHD1-206ENST00000511067 RNF217Q8TC41 542 aa9.55□□□□□ -0.88
CHD1-206ENST00000511067 NGLY1Q96IV0 654 aa9.55□□□□□ -0.88
CHD1-206ENST00000511067 ASB16Q96NS5 453 aa9.55□□□□□ -0.88
CHD1-206ENST00000511067 HCN4Q9Y3Q4 1203 aa9.55□□□□□ -0.88
CHD1-206ENST00000511067 NOM1Q5C9Z4 860 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 208.9 ms