RNA–Protein interactions for RNA: ENST00000510997.1

CALCOCO2-218, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 674 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-218ENST00000510997 ITGA6P23229 1130 aa9.41□□□□□ -0.9
CALCOCO2-218ENST00000510997 PHKA2P46019 1235 aa9.41□□□□□ -0.9
CALCOCO2-218ENST00000510997 ELOAQ14241 798 aaKnown RBP9.41□□□□□ -0.9
CALCOCO2-218ENST00000510997 LCE2CQ5TA81 110 aa9.41□□□□□ -0.9
CALCOCO2-218ENST00000510997 KCTD17Q8N5Z5 321 aa9.41□□□□□ -0.9
CALCOCO2-218ENST00000510997 NANOS1Q8WY41 292 aaKnown RBP9.41□□□□□ -0.9
CALCOCO2-218ENST00000510997 NIFKQ9BYG3 293 aaKnown RBP9.41□□□□□ -0.9
CALCOCO2-218ENST00000510997 ATG7O95352 703 aa9.4□□□□□ -0.9
CALCOCO2-218ENST00000510997 VSIG8P0DPA2 414 aa9.4□□□□□ -0.9
CALCOCO2-218ENST00000510997 TSEN2Q8NCE0 465 aaKnown RBP9.4□□□□□ -0.9
CALCOCO2-218ENST00000510997 A0A1B0GTH6 734 aa9.39□□□□□ -0.91
CALCOCO2-218ENST00000510997 SLC9A9Q8IVB4 645 aa9.39□□□□□ -0.91
CALCOCO2-218ENST00000510997 CUEDC1Q9NWM3 386 aaPredicted RBP9.39□□□□□ -0.91
CALCOCO2-218ENST00000510997 ERBB4Q15303 1308 aa9.38□□□□□ -0.91
CALCOCO2-218ENST00000510997 PPP1R15AO75807 674 aaPredicted RBP9.38□□□□□ -0.91
CALCOCO2-218ENST00000510997 F11P03951 625 aa9.38□□□□□ -0.91
CALCOCO2-218ENST00000510997 RETREG2Q8NC44 543 aa9.38□□□□□ -0.91
CALCOCO2-218ENST00000510997 NOVA2Q9UNW9 492 aaKnown RBP9.38□□□□□ -0.91
CALCOCO2-218ENST00000510997 PLA2G4AP47712 749 aa9.37□□□□□ -0.91
CALCOCO2-218ENST00000510997 TEAD4Q15561 434 aa9.37□□□□□ -0.91
CALCOCO2-218ENST00000510997 FAM200AQ8TCP9 573 aa9.37□□□□□ -0.91
CALCOCO2-218ENST00000510997 ZDHHC1Q8WTX9 485 aa9.37□□□□□ -0.91
CALCOCO2-218ENST00000510997 IRF7Q92985 503 aa9.37□□□□□ -0.91
CALCOCO2-218ENST00000510997 TSPAN10Q9H1Z9 355 aaPredicted RBP9.37□□□□□ -0.91
CALCOCO2-218ENST00000510997 CABP1Q9NZU7 370 aa9.37□□□□□ -0.91
CALCOCO2-218ENST00000510997 ZMIZ1Q9ULJ6 1067 aa9.37□□□□□ -0.91
CALCOCO2-218ENST00000510997 TBCELQ5QJ74 424 aa9.36□□□□□ -0.91
CALCOCO2-218ENST00000510997 POTEAQ6S8J7 498 aa9.36□□□□□ -0.91
CALCOCO2-218ENST00000510997 AEBP1Q8IUX7 1158 aa9.36□□□□□ -0.91
CALCOCO2-218ENST00000510997 TRIM22Q8IYM9 498 aa9.36□□□□□ -0.91
CALCOCO2-218ENST00000510997 GMCL1Q96IK5 515 aa9.36□□□□□ -0.91
CALCOCO2-218ENST00000510997 GAS2L1Q99501 681 aaPredicted RBP9.36□□□□□ -0.91
CALCOCO2-218ENST00000510997 C21orf2O43822 256 aa9.35□□□□□ -0.91
CALCOCO2-218ENST00000510997 MSX1P28360 303 aa9.35□□□□□ -0.91
CALCOCO2-218ENST00000510997 DBN1Q16643 649 aa9.35□□□□□ -0.91
CALCOCO2-218ENST00000510997 VWA5B2Q8N398 1253 aa9.35□□□□□ -0.91
CALCOCO2-218ENST00000510997 C1orf216Q8TAB5 229 aa9.35□□□□□ -0.91
CALCOCO2-218ENST00000510997 NOS2P35228 1153 aa9.34□□□□□ -0.91
CALCOCO2-218ENST00000510997 FAM69CQ0P6D2 419 aa9.34□□□□□ -0.91
CALCOCO2-218ENST00000510997 RIPOR1Q6ZS17 1223 aa9.34□□□□□ -0.91
CALCOCO2-218ENST00000510997 GPR161Q8N6U8 529 aaKnown RBP9.34□□□□□ -0.91
CALCOCO2-218ENST00000510997 GAS2L2Q8NHY3 880 aa9.34□□□□□ -0.91
CALCOCO2-218ENST00000510997 L3MBTL2Q969R5 705 aa9.34□□□□□ -0.91
CALCOCO2-218ENST00000510997 HINFPQ9BQA5 517 aa9.34□□□□□ -0.91
CALCOCO2-218ENST00000510997 ATAD2Q6PL18 1390 aa9.34□□□□□ -0.91
CALCOCO2-218ENST00000510997 H7C1W4 665 aa9.33□□□□□ -0.92
CALCOCO2-218ENST00000510997 ATP4AP20648 1035 aa9.33□□□□□ -0.92
CALCOCO2-218ENST00000510997 PSMA6P60900 246 aaKnown RBP9.33□□□□□ -0.92
CALCOCO2-218ENST00000510997 SV2AQ7L0J3 742 aa9.33□□□□□ -0.92
CALCOCO2-218ENST00000510997 STAG2Q8N3U4 1231 aa9.33□□□□□ -0.92
CALCOCO2-218ENST00000510997 STK32AQ8WU08 396 aa9.33□□□□□ -0.92
CALCOCO2-218ENST00000510997 ZNF837Q96EG3 531 aaPredicted RBP9.33□□□□□ -0.92
CALCOCO2-218ENST00000510997 GPAMQ9HCL2 828 aa9.33□□□□□ -0.92
CALCOCO2-218ENST00000510997 ZDHHC3Q9NYG2 299 aa9.33□□□□□ -0.92
CALCOCO2-218ENST00000510997 PARP3Q9Y6F1 533 aa9.33□□□□□ -0.92
CALCOCO2-218ENST00000510997 ACIN1Q9UKV3 1341 aaKnown RBP9.32□□□□□ -0.92
CALCOCO2-218ENST00000510997 SERTM1A2A2V5 107 aa9.32□□□□□ -0.92
CALCOCO2-218ENST00000510997 EML1O00423 815 aa9.32□□□□□ -0.92
CALCOCO2-218ENST00000510997 THBS1P07996 1170 aa9.32□□□□□ -0.92
CALCOCO2-218ENST00000510997 HIRAP54198 1017 aaPredicted RBP9.32□□□□□ -0.92
CALCOCO2-218ENST00000510997 SWI5Q1ZZU3 235 aa9.32□□□□□ -0.92
CALCOCO2-218ENST00000510997 SCG3Q8WXD2 468 aaKnown RBP9.32□□□□□ -0.92
CALCOCO2-218ENST00000510997 AIDAQ96BJ3 306 aa9.32□□□□□ -0.92
CALCOCO2-218ENST00000510997 CRISPLD1Q9H336 500 aa9.32□□□□□ -0.92
CALCOCO2-218ENST00000510997 CDC14CA4D256 554 aa9.31□□□□□ -0.92
CALCOCO2-218ENST00000510997 IGFBP4P22692 258 aa9.31□□□□□ -0.92
CALCOCO2-218ENST00000510997 WEE1P30291 646 aa9.31□□□□□ -0.92
CALCOCO2-218ENST00000510997 GMPRP36959 345 aa9.31□□□□□ -0.92
CALCOCO2-218ENST00000510997 TXLNAP40222 546 aa9.31□□□□□ -0.92
CALCOCO2-218ENST00000510997 LBRQ14739 615 aaKnown RBP9.31□□□□□ -0.92
CALCOCO2-218ENST00000510997 NBPF1Q3BBV0 1214 aa9.31□□□□□ -0.92
CALCOCO2-218ENST00000510997 C7orf43Q8WVR3 580 aa9.31□□□□□ -0.92
CALCOCO2-218ENST00000510997 C2orf49Q9BVC5 232 aaPredicted RBP9.31□□□□□ -0.92
CALCOCO2-218ENST00000510997 CECR2Q9BXF3 1484 aa9.31□□□□□ -0.92
CALCOCO2-218ENST00000510997 WIPF1O43516 503 aa9.3□□□□□ -0.92
CALCOCO2-218ENST00000510997 PPP1R12BO60237 982 aaPredicted RBP9.3□□□□□ -0.92
CALCOCO2-218ENST00000510997 LGR5O75473 907 aa9.3□□□□□ -0.92
CALCOCO2-218ENST00000510997 SH3PXD2AQ5TCZ1 1133 aa9.3□□□□□ -0.92
CALCOCO2-218ENST00000510997 TMEM164Q5U3C3 297 aa9.3□□□□□ -0.92
CALCOCO2-218ENST00000510997 NUCKS1Q9H1E3 243 aaKnown RBP9.3□□□□□ -0.92
CALCOCO2-218ENST00000510997 RUBCNLQ9H714 662 aa9.3□□□□□ -0.92
CALCOCO2-218ENST00000510997 ZNF232Q9UNY5 417 aa9.3□□□□□ -0.92
CALCOCO2-218ENST00000510997 CSB-PGBD3P0DP91 1061 aa9.29□□□□□ -0.92
CALCOCO2-218ENST00000510997 UBAP2LQ14157 1087 aaKnown RBP9.29□□□□□ -0.92
CALCOCO2-218ENST00000510997 PGBD3Q8N328 593 aa9.29□□□□□ -0.92
CALCOCO2-218ENST00000510997 TATP17735 454 aaPredicted RBP9.28□□□□□ -0.92
CALCOCO2-218ENST00000510997 ZIC5Q96T25 663 aa9.28□□□□□ -0.92
CALCOCO2-218ENST00000510997 CHMP3Q9Y3E7 222 aa9.28□□□□□ -0.92
CALCOCO2-218ENST00000510997 C1orf53Q5VUE5 145 aa9.27□□□□□ -0.93
CALCOCO2-218ENST00000510997 NLRP8Q86W28 1048 aa9.27□□□□□ -0.93
CALCOCO2-218ENST00000510997 RGS22Q8NE09 1264 aa9.27□□□□□ -0.93
CALCOCO2-218ENST00000510997 GTPBP3Q969Y2 492 aaKnown RBP9.27□□□□□ -0.93
CALCOCO2-218ENST00000510997 A0A1W2PNR3 127 aa9.26□□□□□ -0.93
CALCOCO2-218ENST00000510997 KRT76Q01546 638 aa9.26□□□□□ -0.93
CALCOCO2-218ENST00000510997 OCLNQ16625 522 aa9.26□□□□□ -0.93
CALCOCO2-218ENST00000510997 EFHC2Q5JST6 749 aa9.26□□□□□ -0.93
CALCOCO2-218ENST00000510997 COL25A1Q9BXS0 654 aaPredicted RBP9.26□□□□□ -0.93
CALCOCO2-218ENST00000510997 HCN4Q9Y3Q4 1203 aa9.26□□□□□ -0.93
CALCOCO2-218ENST00000510997 GPC6Q9Y625 555 aaPredicted RBP9.26□□□□□ -0.93
CALCOCO2-218ENST00000510997 RSF1Q96T23 1441 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms