RNA–Protein interactions for RNA: ENST00000510129.5

UBE2D3-229, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-229ENST00000510129 GYS1P13807 737 aa28.11■■■□□ 2.09
UBE2D3-229ENST00000510129 A0A087WZG4 1122 aa28.1■■■□□ 2.09
UBE2D3-229ENST00000510129 MMP10P09238 476 aa28.1■■■□□ 2.09
UBE2D3-229ENST00000510129 SNRPA1P09661 255 aaKnown RBP28.09■■■□□ 2.09
UBE2D3-229ENST00000510129 NPM2Q86SE8 214 aaKnown RBP28.09■■■□□ 2.09
UBE2D3-229ENST00000510129 RUNDC1Q96C34 613 aa28.09■■■□□ 2.09
UBE2D3-229ENST00000510129 ZBTB1Q9Y2K1 713 aa28.09■■■□□ 2.09
UBE2D3-229ENST00000510129 COL15A1P39059 1388 aa28.09■■■□□ 2.09
UBE2D3-229ENST00000510129 RIPK4P57078 832 aa28.08■■■□□ 2.09
UBE2D3-229ENST00000510129 NARFQ9UHQ1 456 aa28.07■■■□□ 2.08
UBE2D3-229ENST00000510129 PARP3Q9Y6F1 533 aa28.07■■■□□ 2.08
UBE2D3-229ENST00000510129 CANXP27824 592 aaKnown RBP28.06■■■□□ 2.08
UBE2D3-229ENST00000510129 TMPOP42166 694 aaKnown RBP28.06■■■□□ 2.08
UBE2D3-229ENST00000510129 KCNQ3O43525 872 aa28.05■■■□□ 2.08
UBE2D3-229ENST00000510129 IL6STP40189 918 aaPredicted RBP28.05■■■□□ 2.08
UBE2D3-229ENST00000510129 GPR162Q16538 588 aa28.05■■■□□ 2.08
UBE2D3-229ENST00000510129 ADAMTS8Q9UP79 889 aa28.05■■■□□ 2.08
UBE2D3-229ENST00000510129 EIF5P55010 431 aaKnown RBP28.04■■■□□ 2.08
UBE2D3-229ENST00000510129 NLGN2Q8NFZ4 835 aa28.04■■■□□ 2.08
UBE2D3-229ENST00000510129 BABAM1Q9NWV8 329 aa28.04■■■□□ 2.08
UBE2D3-229ENST00000510129 ANP32CO43423 234 aa28.03■■■□□ 2.08
UBE2D3-229ENST00000510129 SRP68Q9UHB9 627 aaKnown RBP28.03■■■□□ 2.08
UBE2D3-229ENST00000510129 USPL1Q5W0Q7 1092 aa28.02■■■□□ 2.08
UBE2D3-229ENST00000510129 KDM3BQ7LBC6 1761 aa28.01■■■□□ 2.07
UBE2D3-229ENST00000510129 FKBP8Q14318 412 aa28■■■□□ 2.07
UBE2D3-229ENST00000510129 CCDC146Q8IYE0 955 aa28■■■□□ 2.07
UBE2D3-229ENST00000510129 GRIN3BO60391 1043 aa27.99■■■□□ 2.07
UBE2D3-229ENST00000510129 TGFB2P61812 414 aa27.99■■■□□ 2.07
UBE2D3-229ENST00000510129 KIF13BQ9NQT8 1826 aa27.98■■■□□ 2.07
UBE2D3-229ENST00000510129 THUMPD2Q9BTF0 503 aaKnown RBP27.98■■■□□ 2.07
UBE2D3-229ENST00000510129 USP16Q9Y5T5 823 aa27.98■■■□□ 2.07
UBE2D3-229ENST00000510129 MIS18AQ9NYP9 233 aa27.97■■■□□ 2.07
UBE2D3-229ENST00000510129 C10orf71Q711Q0 1435 aa27.97■■■□□ 2.07
UBE2D3-229ENST00000510129 A1BGP04217 495 aa27.96■■■□□ 2.07
UBE2D3-229ENST00000510129 TM4SF1P30408 202 aa27.96■■■□□ 2.07
UBE2D3-229ENST00000510129 PELP1Q8IZL8 1130 aaKnown RBP27.96■■■□□ 2.07
UBE2D3-229ENST00000510129 TSPYL4Q9UJ04 414 aa27.96■■■□□ 2.07
UBE2D3-229ENST00000510129 LAMB4A4D0S4 1761 aa27.96■■■□□ 2.07
UBE2D3-229ENST00000510129 EIF4A1P60842 406 aaKnown RBP27.95■■■□□ 2.06
UBE2D3-229ENST00000510129 ZNF330Q9Y3S2 320 aaPredicted RBP27.95■■■□□ 2.06
UBE2D3-229ENST00000510129 GIGYF1O75420 1035 aaPredicted RBP27.94■■■□□ 2.06
UBE2D3-229ENST00000510129 YY1P25490 414 aa27.94■■■□□ 2.06
UBE2D3-229ENST00000510129 NEUROD2Q15784 382 aa27.94■■■□□ 2.06
UBE2D3-229ENST00000510129 RGL2O15211 777 aa27.93■■■□□ 2.06
UBE2D3-229ENST00000510129 RRP7AQ9Y3A4 280 aaKnown RBP27.93■■■□□ 2.06
UBE2D3-229ENST00000510129 SCN7AQ01118 1682 aa27.92■■■□□ 2.06
UBE2D3-229ENST00000510129 POLRMTO00411 1230 aaKnown RBP27.92■■■□□ 2.06
UBE2D3-229ENST00000510129 PRAMEF22A3QJZ6 481 aa27.91■■■□□ 2.06
UBE2D3-229ENST00000510129 DDR1Q08345 913 aa27.91■■■□□ 2.06
UBE2D3-229ENST00000510129 NFIXQ14938 502 aa27.91■■■□□ 2.06
UBE2D3-229ENST00000510129 CALD1Q05682 793 aaKnown RBP27.9■■■□□ 2.06
UBE2D3-229ENST00000510129 DZIP3Q86Y13 1208 aaKnown RBP27.9■■■□□ 2.06
UBE2D3-229ENST00000510129 BCL2L12Q9HB09 334 aa27.9■■■□□ 2.06
UBE2D3-229ENST00000510129 TBC1D2BQ9UPU7 963 aa27.9■■■□□ 2.06
UBE2D3-229ENST00000510129 CHD4Q14839 1912 aa27.89■■■□□ 2.06
UBE2D3-229ENST00000510129 TRIM35Q9UPQ4 493 aa27.89■■■□□ 2.06
UBE2D3-229ENST00000510129 ZNF652Q9Y2D9 606 aa27.89■■■□□ 2.06
UBE2D3-229ENST00000510129 ERBB4Q15303 1308 aa27.89■■■□□ 2.05
UBE2D3-229ENST00000510129 PXDNLA1KZ92 1463 aa27.89■■■□□ 2.05
UBE2D3-229ENST00000510129 CLEC4GQ6UXB4 293 aa27.88■■■□□ 2.05
UBE2D3-229ENST00000510129 YBX3P16989 372 aaKnown RBP eCLIP27.87■■■□□ 2.05
UBE2D3-229ENST00000510129 CAMTA2O94983 1202 aa27.86■■■□□ 2.05
UBE2D3-229ENST00000510129 MRS2Q9HD23 443 aa27.86■■■□□ 2.05
UBE2D3-229ENST00000510129 CARMIL3Q8ND23 1372 aa27.86■■■□□ 2.05
UBE2D3-229ENST00000510129 NRXN2Q9P2S2 1712 aa27.85■■■□□ 2.05
UBE2D3-229ENST00000510129 CHL1O00533 1208 aa27.85■■■□□ 2.05
UBE2D3-229ENST00000510129 APAF1O14727 1248 aa27.85■■■□□ 2.05
UBE2D3-229ENST00000510129 SERPINB2P05120 415 aa27.85■■■□□ 2.05
UBE2D3-229ENST00000510129 BCORQ6W2J9 1755 aa27.85■■■□□ 2.05
UBE2D3-229ENST00000510129 NBPF26B4DH59 902 aa27.84■■■□□ 2.05
UBE2D3-229ENST00000510129 NBPF10Q6P3W6 841 aaKnown RBP27.84■■■□□ 2.05
UBE2D3-229ENST00000510129 NBPF15Q8N660 670 aa27.84■■■□□ 2.05
UBE2D3-229ENST00000510129 SETDB2Q96T68 719 aa27.84■■■□□ 2.05
UBE2D3-229ENST00000510129 CFAP44Q96MT7 982 aa27.83■■■□□ 2.05
UBE2D3-229ENST00000510129 KIAA1551Q9HCM1 1747 aa27.83■■■□□ 2.05
UBE2D3-229ENST00000510129 TBC1D9BQ66K14 1250 aa27.82■■■□□ 2.04
UBE2D3-229ENST00000510129 A0A0G2JLW4 131 aa27.81■■■□□ 2.04
UBE2D3-229ENST00000510129 DPEP1P16444 411 aa27.81■■■□□ 2.04
UBE2D3-229ENST00000510129 PIP4K2AP48426 406 aaPredicted RBP27.81■■■□□ 2.04
UBE2D3-229ENST00000510129 BICDL1Q6ZP65 573 aa27.81■■■□□ 2.04
UBE2D3-229ENST00000510129 PDZRN3Q9UPQ7 1066 aa27.81■■■□□ 2.04
UBE2D3-229ENST00000510129 LAS1LQ9Y4W2 734 aaKnown RBP27.81■■■□□ 2.04
UBE2D3-229ENST00000510129 N4BP2Q86UW6 1770 aaPredicted RBP27.81■■■□□ 2.04
UBE2D3-229ENST00000510129 AFDNP55196 1824 aaKnown RBP27.81■■■□□ 2.04
UBE2D3-229ENST00000510129 PIM2Q9P1W9 311 aa27.8■■■□□ 2.04
UBE2D3-229ENST00000510129 HOXB7P09629 217 aa27.79■■■□□ 2.04
UBE2D3-229ENST00000510129 CCDC184Q52MB2 194 aa27.79■■■□□ 2.04
UBE2D3-229ENST00000510129 NCBP3Q53F19 620 aaKnown RBP27.79■■■□□ 2.04
UBE2D3-229ENST00000510129 ERVV-1B6SEH8 477 aa27.78■■■□□ 2.04
UBE2D3-229ENST00000510129 KIF6Q6ZMV9 814 aa27.78■■■□□ 2.04
UBE2D3-229ENST00000510129 NPHP1O15259 732 aa27.77■■■□□ 2.04
UBE2D3-229ENST00000510129 GNAI1P63096 354 aa27.77■■■□□ 2.04
UBE2D3-229ENST00000510129 IFT57Q9NWB7 429 aa27.77■■■□□ 2.04
UBE2D3-229ENST00000510129 BCS1LQ9Y276 419 aa27.76■■■□□ 2.03
UBE2D3-229ENST00000510129 BRCA1P38398 1863 aaKnown RBP27.75■■■□□ 2.03
UBE2D3-229ENST00000510129 CCDC27Q2M243 656 aa27.75■■■□□ 2.03
UBE2D3-229ENST00000510129 CNBD1Q8NA66 436 aa27.75■■■□□ 2.03
UBE2D3-229ENST00000510129 BRIP1Q9BX63 1249 aa27.75■■■□□ 2.03
UBE2D3-229ENST00000510129 EIF2S2P20042 333 aaKnown RBP27.74■■■□□ 2.03
UBE2D3-229ENST00000510129 KCNA3P22001 575 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms