RNA–Protein interactions for RNA: ENST00000509662.5

ATP2C1-217, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 559 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-217ENST00000509662 SOS1Q07889 1333 aaPredicted RBP31.35■■■□□ 2.61
ATP2C1-217ENST00000509662 PARP3Q9Y6F1 533 aa31.35■■■□□ 2.61
ATP2C1-217ENST00000509662 DCTN1Q14203 1278 aa31.34■■■□□ 2.61
ATP2C1-217ENST00000509662 SRP68Q9UHB9 627 aaKnown RBP31.34■■■□□ 2.61
ATP2C1-217ENST00000509662 TAF7Q15545 349 aaPredicted RBP31.33■■■□□ 2.61
ATP2C1-217ENST00000509662 NFE2L2Q16236 605 aa31.33■■■□□ 2.61
ATP2C1-217ENST00000509662 ADAMTS8Q9UP79 889 aa31.33■■■□□ 2.61
ATP2C1-217ENST00000509662 ZBTB1Q9Y2K1 713 aa31.33■■■□□ 2.61
ATP2C1-217ENST00000509662 CANXP27824 592 aaKnown RBP31.32■■■□□ 2.6
ATP2C1-217ENST00000509662 C4AP0C0L4 1744 aa31.32■■■□□ 2.6
ATP2C1-217ENST00000509662 GRIN3BO60391 1043 aa31.31■■■□□ 2.6
ATP2C1-217ENST00000509662 KCNQ3O43525 872 aa31.3■■■□□ 2.6
ATP2C1-217ENST00000509662 COL15A1P39059 1388 aa31.3■■■□□ 2.6
ATP2C1-217ENST00000509662 A0A087WZG4 1122 aa31.29■■■□□ 2.6
ATP2C1-217ENST00000509662 FKBP8Q14318 412 aa31.29■■■□□ 2.6
ATP2C1-217ENST00000509662 NARFQ9UHQ1 456 aa31.29■■■□□ 2.6
ATP2C1-217ENST00000509662 USPL1Q5W0Q7 1092 aa31.28■■■□□ 2.6
ATP2C1-217ENST00000509662 NPM2Q86SE8 214 aaKnown RBP31.27■■■□□ 2.6
ATP2C1-217ENST00000509662 CCDC146Q8IYE0 955 aa31.27■■■□□ 2.6
ATP2C1-217ENST00000509662 PNISRQ8TF01 805 aaKnown RBP31.27■■■□□ 2.6
ATP2C1-217ENST00000509662 MRS2Q9HD23 443 aa31.27■■■□□ 2.6
ATP2C1-217ENST00000509662 SNRPA1P09661 255 aaKnown RBP31.25■■■□□ 2.59
ATP2C1-217ENST00000509662 YBX3P16989 372 aaKnown RBP eCLIP31.25■■■□□ 2.59
ATP2C1-217ENST00000509662 EIF5P55010 431 aaKnown RBP31.25■■■□□ 2.59
ATP2C1-217ENST00000509662 TGFB2P61812 414 aa31.25■■■□□ 2.59
ATP2C1-217ENST00000509662 RUNDC1Q96C34 613 aa31.24■■■□□ 2.59
ATP2C1-217ENST00000509662 CHD4Q14839 1912 aa31.24■■■□□ 2.59
ATP2C1-217ENST00000509662 DLG5Q8TDM6 1919 aa31.24■■■□□ 2.59
ATP2C1-217ENST00000509662 TM4SF1P30408 202 aa31.23■■■□□ 2.59
ATP2C1-217ENST00000509662 IL6STP40189 918 aaPredicted RBP31.23■■■□□ 2.59
ATP2C1-217ENST00000509662 A1BGP04217 495 aa31.21■■■□□ 2.59
ATP2C1-217ENST00000509662 RIPK4P57078 832 aa31.21■■■□□ 2.59
ATP2C1-217ENST00000509662 MIS18AQ9NYP9 233 aa31.21■■■□□ 2.59
ATP2C1-217ENST00000509662 ZNF330Q9Y3S2 320 aaPredicted RBP31.21■■■□□ 2.59
ATP2C1-217ENST00000509662 USP16Q9Y5T5 823 aa31.21■■■□□ 2.59
ATP2C1-217ENST00000509662 TMPOP42166 694 aaKnown RBP31.2■■■□□ 2.59
ATP2C1-217ENST00000509662 DDR1Q08345 913 aa31.19■■■□□ 2.58
ATP2C1-217ENST00000509662 C10orf71Q711Q0 1435 aa31.18■■■□□ 2.58
ATP2C1-217ENST00000509662 LMOD3Q0VAK6 560 aa31.18■■■□□ 2.58
ATP2C1-217ENST00000509662 POLRMTO00411 1230 aaKnown RBP31.17■■■□□ 2.58
ATP2C1-217ENST00000509662 KIF13BQ9NQT8 1826 aa31.17■■■□□ 2.58
ATP2C1-217ENST00000509662 A0A0G2JLW4 131 aa31.16■■■□□ 2.58
ATP2C1-217ENST00000509662 NFIXQ14938 502 aa31.16■■■□□ 2.58
ATP2C1-217ENST00000509662 THUMPD2Q9BTF0 503 aaKnown RBP31.16■■■□□ 2.58
ATP2C1-217ENST00000509662 BCL2L12Q9HB09 334 aa31.15■■■□□ 2.58
ATP2C1-217ENST00000509662 TBC1D2BQ9UPU7 963 aa31.15■■■□□ 2.58
ATP2C1-217ENST00000509662 RRP7AQ9Y3A4 280 aaKnown RBP31.15■■■□□ 2.58
ATP2C1-217ENST00000509662 PRAMEF22A3QJZ6 481 aa31.14■■■□□ 2.58
ATP2C1-217ENST00000509662 WWC3Q9ULE0 1092 aa31.14■■■□□ 2.58
ATP2C1-217ENST00000509662 PXDNLA1KZ92 1463 aa31.14■■■□□ 2.57
ATP2C1-217ENST00000509662 UTRNP46939 3433 aa31.13■■■□□ 2.57
ATP2C1-217ENST00000509662 DPEP1P16444 411 aa31.12■■■□□ 2.57
ATP2C1-217ENST00000509662 SERPINB2P05120 415 aa31.11■■■□□ 2.57
ATP2C1-217ENST00000509662 EIF4A1P60842 406 aaKnown RBP31.1■■■□□ 2.57
ATP2C1-217ENST00000509662 NEUROD2Q15784 382 aa31.1■■■□□ 2.57
ATP2C1-217ENST00000509662 BICDL1Q6ZP65 573 aa31.1■■■□□ 2.57
ATP2C1-217ENST00000509662 DZIP3Q86Y13 1208 aaKnown RBP31.1■■■□□ 2.57
ATP2C1-217ENST00000509662 DIEXFQ68CQ4 756 aaKnown RBP31.09■■■□□ 2.57
ATP2C1-217ENST00000509662 BABAM1Q9NWV8 329 aa31.09■■■□□ 2.57
ATP2C1-217ENST00000509662 GOLGB1Q14789 3259 aaKnown RBP31.09■■■□□ 2.57
ATP2C1-217ENST00000509662 N4BP2Q86UW6 1770 aaPredicted RBP31.08■■■□□ 2.57
ATP2C1-217ENST00000509662 APAF1O14727 1248 aa31.08■■■□□ 2.57
ATP2C1-217ENST00000509662 GIGYF1O75420 1035 aaPredicted RBP31.08■■■□□ 2.57
ATP2C1-217ENST00000509662 PIP4K2AP48426 406 aaPredicted RBP31.08■■■□□ 2.57
ATP2C1-217ENST00000509662 ZNF784Q8NCA9 323 aaPredicted RBP31.08■■■□□ 2.57
ATP2C1-217ENST00000509662 TSPYL4Q9UJ04 414 aa31.08■■■□□ 2.57
ATP2C1-217ENST00000509662 TRIM35Q9UPQ4 493 aa31.08■■■□□ 2.57
ATP2C1-217ENST00000509662 BCS1LQ9Y276 419 aa31.08■■■□□ 2.57
ATP2C1-217ENST00000509662 PIM2Q9P1W9 311 aa31.07■■■□□ 2.56
ATP2C1-217ENST00000509662 KDM3BQ7LBC6 1761 aa31.07■■■□□ 2.56
ATP2C1-217ENST00000509662 CAMTA2O94983 1202 aa31.06■■■□□ 2.56
ATP2C1-217ENST00000509662 TBC1D9BQ66K14 1250 aa31.06■■■□□ 2.56
ATP2C1-217ENST00000509662 SETDB2Q96T68 719 aa31.05■■■□□ 2.56
ATP2C1-217ENST00000509662 KIAA1551Q9HCM1 1747 aa31.04■■■□□ 2.56
ATP2C1-217ENST00000509662 NBPF26B4DH59 902 aa31.04■■■□□ 2.56
ATP2C1-217ENST00000509662 KCNA3P22001 575 aa31.04■■■□□ 2.56
ATP2C1-217ENST00000509662 NBPF10Q6P3W6 841 aaKnown RBP31.04■■■□□ 2.56
ATP2C1-217ENST00000509662 CLEC4GQ6UXB4 293 aa31.04■■■□□ 2.56
ATP2C1-217ENST00000509662 NBPF15Q8N660 670 aa31.04■■■□□ 2.56
ATP2C1-217ENST00000509662 ZNF652Q9Y2D9 606 aa31.04■■■□□ 2.56
ATP2C1-217ENST00000509662 CCER2I3L3R5 266 aa31.01■■■□□ 2.55
ATP2C1-217ENST00000509662 DALRD3Q5D0E6 543 aaKnown RBP31.01■■■□□ 2.55
ATP2C1-217ENST00000509662 AFDNP55196 1824 aaKnown RBP31.01■■■□□ 2.55
ATP2C1-217ENST00000509662 SCN7AQ01118 1682 aa31■■■□□ 2.55
ATP2C1-217ENST00000509662 RGL2O15211 777 aa31■■■□□ 2.55
ATP2C1-217ENST00000509662 CHRNA5P30532 468 aa31■■■□□ 2.55
ATP2C1-217ENST00000509662 CARMIL3Q8ND23 1372 aa31■■■□□ 2.55
ATP2C1-217ENST00000509662 NRXN2Q9P2S2 1712 aa30.99■■■□□ 2.55
ATP2C1-217ENST00000509662 FAM9BQ8IZU0 186 aa30.99■■■□□ 2.55
ATP2C1-217ENST00000509662 LAMB4A4D0S4 1761 aa30.98■■■□□ 2.55
ATP2C1-217ENST00000509662 NPHP1O15259 732 aa30.98■■■□□ 2.55
ATP2C1-217ENST00000509662 ARHGAP27Q6ZUM4 889 aa30.97■■■□□ 2.55
ATP2C1-217ENST00000509662 H0YIN7 160 aa30.96■■■□□ 2.55
ATP2C1-217ENST00000509662 PDZRN3Q9UPQ7 1066 aa30.96■■■□□ 2.55
ATP2C1-217ENST00000509662 PDE6BP35913 854 aa30.95■■■□□ 2.55
ATP2C1-217ENST00000509662 NGEFQ8N5V2 710 aa30.95■■■□□ 2.55
ATP2C1-217ENST00000509662 LAS1LQ9Y4W2 734 aaKnown RBP30.95■■■□□ 2.55
ATP2C1-217ENST00000509662 ERBB4Q15303 1308 aa30.95■■■□□ 2.54
ATP2C1-217ENST00000509662 CHL1O00533 1208 aa30.94■■■□□ 2.54
ATP2C1-217ENST00000509662 BRCA1P38398 1863 aaKnown RBP30.94■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms