RNA–Protein interactions for RNA: ENST00000509518.1

CHRNA9-203, Transcript of cholinergic receptor nicotinic alpha 9 subunit, humanhuman

TSL 3

Gene CHRNA9, Length 465 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9-203ENST00000509518 GADD45BO75293 160 aaPredicted RBP11.36□□□□□ -0.59
CHRNA9-203ENST00000509518 U2AF2P26368 475 aaKnown RBP eCLIP11.36□□□□□ -0.59
CHRNA9-203ENST00000509518 C16orf71Q8IYS4 520 aaPredicted RBP11.36□□□□□ -0.59
CHRNA9-203ENST00000509518 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.36□□□□□ -0.59
CHRNA9-203ENST00000509518 RUFY2Q8WXA3 655 aa11.36□□□□□ -0.59
CHRNA9-203ENST00000509518 CHL1O00533 1208 aa11.35□□□□□ -0.59
CHRNA9-203ENST00000509518 KRT85P78386 507 aa11.35□□□□□ -0.59
CHRNA9-203ENST00000509518 TDRD7Q8NHU6 1098 aaKnown RBP11.35□□□□□ -0.59
CHRNA9-203ENST00000509518 OTUD7AQ8TE49 926 aaPredicted RBP11.35□□□□□ -0.59
CHRNA9-203ENST00000509518 ERO1AQ96HE7 468 aa11.35□□□□□ -0.59
CHRNA9-203ENST00000509518 TIGD1Q96MW7 591 aa11.35□□□□□ -0.59
CHRNA9-203ENST00000509518 DNAJC2Q99543 621 aaKnown RBP11.35□□□□□ -0.59
CHRNA9-203ENST00000509518 TM6SF1Q9BZW5 370 aa11.35□□□□□ -0.59
CHRNA9-203ENST00000509518 KCNF1Q9H3M0 494 aa11.35□□□□□ -0.59
CHRNA9-203ENST00000509518 PYCARDQ9ULZ3 195 aa11.35□□□□□ -0.59
CHRNA9-203ENST00000509518 CNPY2Q9Y2B0 182 aa11.35□□□□□ -0.59
CHRNA9-203ENST00000509518 CEP170BQ9Y4F5 1589 aaPredicted RBP11.35□□□□□ -0.59
CHRNA9-203ENST00000509518 CPS1P31327 1500 aa11.35□□□□□ -0.59
CHRNA9-203ENST00000509518 MINK1Q8N4C8 1332 aaPredicted RBP11.35□□□□□ -0.59
CHRNA9-203ENST00000509518 NRDCO43847 1150 aa11.34□□□□□ -0.59
CHRNA9-203ENST00000509518 SMARCA5O60264 1052 aaPredicted RBP11.34□□□□□ -0.59
CHRNA9-203ENST00000509518 MEIS3Q99687 375 aa11.34□□□□□ -0.59
CHRNA9-203ENST00000509518 CHMP4AQ9BY43 222 aa11.34□□□□□ -0.59
CHRNA9-203ENST00000509518 KCND1Q9NSA2 647 aa11.34□□□□□ -0.59
CHRNA9-203ENST00000509518 PPP6R1Q9UPN7 881 aa11.34□□□□□ -0.59
CHRNA9-203ENST00000509518 NPHP3Q7Z494 1330 aa11.34□□□□□ -0.59
CHRNA9-203ENST00000509518 TRIM6-TRIM34B2RNG4 842 aa11.33□□□□□ -0.6
CHRNA9-203ENST00000509518 FIBPO43427 364 aa11.33□□□□□ -0.6
CHRNA9-203ENST00000509518 TNNT1P13805 278 aa11.33□□□□□ -0.6
CHRNA9-203ENST00000509518 ZNF75DP51815 510 aa11.33□□□□□ -0.6
CHRNA9-203ENST00000509518 HSP90AB4PQ58FF6 505 aa11.33□□□□□ -0.6
CHRNA9-203ENST00000509518 VPS53Q5VIR6 699 aa11.33□□□□□ -0.6
CHRNA9-203ENST00000509518 DRC7Q8IY82 874 aa11.33□□□□□ -0.6
CHRNA9-203ENST00000509518 CNTROBQ8N137 903 aa11.33□□□□□ -0.6
CHRNA9-203ENST00000509518 KIF18AQ8NI77 898 aa11.33□□□□□ -0.6
CHRNA9-203ENST00000509518 PHACTR3Q96KR7 559 aa11.33□□□□□ -0.6
CHRNA9-203ENST00000509518 TTC14Q96N46 770 aa11.33□□□□□ -0.6
CHRNA9-203ENST00000509518 ZNF830Q96NB3 372 aaPredicted RBP11.33□□□□□ -0.6
CHRNA9-203ENST00000509518 PRAM1Q96QH2 718 aa11.33□□□□□ -0.6
CHRNA9-203ENST00000509518 CDK19Q9BWU1 502 aa11.33□□□□□ -0.6
CHRNA9-203ENST00000509518 STK31Q9BXU1 1019 aa11.33□□□□□ -0.6
CHRNA9-203ENST00000509518 SCAND2PQ9GZW5 306 aaPredicted RBP11.33□□□□□ -0.6
CHRNA9-203ENST00000509518 RIMS1Q86UR5 1692 aaKnown RBP11.33□□□□□ -0.6
CHRNA9-203ENST00000509518 TTC21BQ7Z4L5 1316 aa11.33□□□□□ -0.6
CHRNA9-203ENST00000509518 MAP3K5Q99683 1374 aa11.32□□□□□ -0.6
CHRNA9-203ENST00000509518 CTAGE5O15320 804 aa11.32□□□□□ -0.6
CHRNA9-203ENST00000509518 CCP110O43303 1012 aa11.32□□□□□ -0.6
CHRNA9-203ENST00000509518 HMOX1P09601 288 aa11.32□□□□□ -0.6
CHRNA9-203ENST00000509518 SYT1P21579 422 aa11.32□□□□□ -0.6
CHRNA9-203ENST00000509518 PLCB2Q00722 1185 aa11.32□□□□□ -0.6
CHRNA9-203ENST00000509518 TYRO3Q06418 890 aa11.32□□□□□ -0.6
CHRNA9-203ENST00000509518 ANKRD1Q15327 319 aa11.32□□□□□ -0.6
CHRNA9-203ENST00000509518 SARM1Q6SZW1 724 aa11.32□□□□□ -0.6
CHRNA9-203ENST00000509518 PLA2G4DQ86XP0 818 aa11.32□□□□□ -0.6
CHRNA9-203ENST00000509518 BBXQ8WY36 941 aaPredicted RBP11.32□□□□□ -0.6
CHRNA9-203ENST00000509518 COG3Q96JB2 828 aa11.32□□□□□ -0.6
CHRNA9-203ENST00000509518 THUMPD2Q9BTF0 503 aaKnown RBP11.32□□□□□ -0.6
CHRNA9-203ENST00000509518 PALD1Q9ULE6 856 aa11.32□□□□□ -0.6
CHRNA9-203ENST00000509518 GOLGA6L4A6NEF3 574 aa11.31□□□□□ -0.6
CHRNA9-203ENST00000509518 SPDYE4A6NLX3 237 aa11.31□□□□□ -0.6
CHRNA9-203ENST00000509518 HIP1O00291 1037 aa11.31□□□□□ -0.6
CHRNA9-203ENST00000509518 ELL2O00472 640 aaPredicted RBP11.31□□□□□ -0.6
CHRNA9-203ENST00000509518 SGSM2O43147 1006 aa11.31□□□□□ -0.6
CHRNA9-203ENST00000509518 PTGS1P23219 599 aa11.31□□□□□ -0.6
CHRNA9-203ENST00000509518 KCNJ6P48051 423 aa11.31□□□□□ -0.6
CHRNA9-203ENST00000509518 GSDMDP57764 484 aa11.31□□□□□ -0.6
CHRNA9-203ENST00000509518 ATP8B2P98198 1209 aa11.31□□□□□ -0.6
CHRNA9-203ENST00000509518 TPD52L1Q16890 204 aaPredicted RBP11.31□□□□□ -0.6
CHRNA9-203ENST00000509518 CEP135Q66GS9 1140 aa11.31□□□□□ -0.6
CHRNA9-203ENST00000509518 ZSCAN25Q6NSZ9 544 aa11.31□□□□□ -0.6
CHRNA9-203ENST00000509518 RBM43Q6ZSC3 357 aaKnown RBP11.31□□□□□ -0.6
CHRNA9-203ENST00000509518 IPO4Q8TEX9 1081 aaKnown RBP11.31□□□□□ -0.6
CHRNA9-203ENST00000509518 RILPL2Q969X0 211 aa11.31□□□□□ -0.6
CHRNA9-203ENST00000509518 TNMDQ9H2S6 317 aa11.31□□□□□ -0.6
CHRNA9-203ENST00000509518 CLSTN2Q9H4D0 955 aa11.31□□□□□ -0.6
CHRNA9-203ENST00000509518 GDPD2Q9HCC8 539 aa11.31□□□□□ -0.6
CHRNA9-203ENST00000509518 CRB1P82279 1406 aa11.31□□□□□ -0.6
CHRNA9-203ENST00000509518 TTC21AQ8NDW8 1320 aa11.31□□□□□ -0.6
CHRNA9-203ENST00000509518 USP42Q9H9J4 1324 aaKnown RBP11.31□□□□□ -0.6
CHRNA9-203ENST00000509518 GOLGA6L19H0YKK7 550 aa11.3□□□□□ -0.6
CHRNA9-203ENST00000509518 BMS1Q14692 1282 aaKnown RBP11.3□□□□□ -0.6
CHRNA9-203ENST00000509518 TERF2Q15554 542 aa11.3□□□□□ -0.6
CHRNA9-203ENST00000509518 TEX35Q5T0J7 233 aa11.3□□□□□ -0.6
CHRNA9-203ENST00000509518 MRFAP1L1Q96HT8 127 aa11.3□□□□□ -0.6
CHRNA9-203ENST00000509518 GPATCH3Q96I76 525 aa11.3□□□□□ -0.6
CHRNA9-203ENST00000509518 ARGLU1Q9NWB6 273 aaPredicted RBP11.3□□□□□ -0.6
CHRNA9-203ENST00000509518 MTMR6Q9Y217 621 aa11.3□□□□□ -0.6
CHRNA9-203ENST00000509518 TTC41PQ6P2S7 1318 aa11.3□□□□□ -0.6
CHRNA9-203ENST00000509518 APBB1O00213 710 aa11.29□□□□□ -0.6
CHRNA9-203ENST00000509518 TPM1P09493 284 aa11.29□□□□□ -0.6
CHRNA9-203ENST00000509518 SLFN14P0C7P3 912 aa11.29□□□□□ -0.6
CHRNA9-203ENST00000509518 GTF2E1P29083 439 aaPredicted RBP11.29□□□□□ -0.6
CHRNA9-203ENST00000509518 AK2P54819 239 aa11.29□□□□□ -0.6
CHRNA9-203ENST00000509518 RBM6P78332 1123 aaKnown RBP11.29□□□□□ -0.6
CHRNA9-203ENST00000509518 GIMAP6Q6P9H5 292 aa11.29□□□□□ -0.6
CHRNA9-203ENST00000509518 NOL8Q76FK4 1167 aaKnown RBP11.29□□□□□ -0.6
CHRNA9-203ENST00000509518 C17orf53Q8N3J3 647 aaPredicted RBP11.29□□□□□ -0.6
CHRNA9-203ENST00000509518 SPC24Q8NBT2 197 aa11.29□□□□□ -0.6
CHRNA9-203ENST00000509518 TSC1Q92574 1164 aa11.29□□□□□ -0.6
CHRNA9-203ENST00000509518 C16orf45Q96MC5 204 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms