RNA–Protein interactions for RNA: ENST00000509431.1

HMGCR-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 421 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-208ENST00000509431 SCN4AP35499 1836 aa19.2■□□□□ 0.66
HMGCR-208ENST00000509431 WDR33Q9C0J8 1336 aaKnown RBP19.2■□□□□ 0.66
HMGCR-208ENST00000509431 TONSLQ96HA7 1378 aa19.19■□□□□ 0.66
HMGCR-208ENST00000509431 BEGAINQ9BUH8 593 aa19.19■□□□□ 0.66
HMGCR-208ENST00000509431 AFDNP55196 1824 aaKnown RBP19.18■□□□□ 0.66
HMGCR-208ENST00000509431 ERVV-2B6SEH9 535 aa19.18■□□□□ 0.66
HMGCR-208ENST00000509431 ITGBL1O95965 494 aaPredicted RBP19.18■□□□□ 0.66
HMGCR-208ENST00000509431 NRXN2Q9P2S2 1712 aa19.17■□□□□ 0.66
HMGCR-208ENST00000509431 CRKLP46109 303 aaKnown RBP19.17■□□□□ 0.66
HMGCR-208ENST00000509431 CFAP44Q96MT7 982 aa19.17■□□□□ 0.66
HMGCR-208ENST00000509431 FER1L6Q2WGJ9 1857 aa19.16■□□□□ 0.66
HMGCR-208ENST00000509431 DDNO94850 711 aaPredicted RBP19.16■□□□□ 0.66
HMGCR-208ENST00000509431 H0YIN7 160 aa19.15■□□□□ 0.66
HMGCR-208ENST00000509431 FYB1O15117 783 aa19.15■□□□□ 0.66
HMGCR-208ENST00000509431 ZPR1O75312 459 aa19.15■□□□□ 0.66
HMGCR-208ENST00000509431 C2CD5Q86YS7 1000 aa19.15■□□□□ 0.66
HMGCR-208ENST00000509431 L3MBTL3Q96JM7 780 aaPredicted RBP19.15■□□□□ 0.66
HMGCR-208ENST00000509431 TAF1DQ9H5J8 278 aaPredicted RBP19.15■□□□□ 0.66
HMGCR-208ENST00000509431 LTBP3Q9NS15 1303 aa19.15■□□□□ 0.66
HMGCR-208ENST00000509431 THSD7BQ9C0I4 1608 aa19.14■□□□□ 0.66
HMGCR-208ENST00000509431 GGNBP2Q9H3C7 697 aa19.14■□□□□ 0.65
HMGCR-208ENST00000509431 HSP90AB1P08238 724 aaKnown RBP19.13■□□□□ 0.65
HMGCR-208ENST00000509431 PDZRN3Q9UPQ7 1066 aa19.13■□□□□ 0.65
HMGCR-208ENST00000509431 ADAMTS7Q9UKP4 1686 aa19.13■□□□□ 0.65
HMGCR-208ENST00000509431 ECE1P42892 770 aa19.11■□□□□ 0.65
HMGCR-208ENST00000509431 USPL1Q5W0Q7 1092 aa19.11■□□□□ 0.65
HMGCR-208ENST00000509431 CARD11Q9BXL7 1154 aa19.11■□□□□ 0.65
HMGCR-208ENST00000509431 TAOK3Q9H2K8 898 aa19.11■□□□□ 0.65
HMGCR-208ENST00000509431 NFIXQ14938 502 aa19.1■□□□□ 0.65
HMGCR-208ENST00000509431 MCOLN1Q9GZU1 580 aa19.1■□□□□ 0.65
HMGCR-208ENST00000509431 ABT1Q9ULW3 272 aaKnown RBP19.1■□□□□ 0.65
HMGCR-208ENST00000509431 TNRC18O15417 2968 aaPredicted RBP19.09■□□□□ 0.65
HMGCR-208ENST00000509431 SERPINB2P05120 415 aa19.09■□□□□ 0.65
HMGCR-208ENST00000509431 ADAMTSL1Q8N6G6 1762 aa19.09■□□□□ 0.65
HMGCR-208ENST00000509431 C21orf2O43822 256 aa19.08■□□□□ 0.64
HMGCR-208ENST00000509431 SLC24A1O60721 1099 aa19.08■□□□□ 0.64
HMGCR-208ENST00000509431 EAPPQ56P03 285 aaPredicted RBP19.08■□□□□ 0.64
HMGCR-208ENST00000509431 PRPF38BQ5VTL8 546 aaKnown RBP19.08■□□□□ 0.64
HMGCR-208ENST00000509431 EYA1Q99502 592 aa19.08■□□□□ 0.64
HMGCR-208ENST00000509431 CLEC11AQ9Y240 323 aa19.08■□□□□ 0.64
HMGCR-208ENST00000509431 KIF20BQ96Q89 1820 aa19.08■□□□□ 0.64
HMGCR-208ENST00000509431 CA12O43570 354 aa19.07■□□□□ 0.64
HMGCR-208ENST00000509431 PTCD1O75127 700 aaKnown RBP19.07■□□□□ 0.64
HMGCR-208ENST00000509431 PNMA8AQ86V59 439 aaPredicted RBP19.07■□□□□ 0.64
HMGCR-208ENST00000509431 TJP1Q07157 1748 aa19.07■□□□□ 0.64
HMGCR-208ENST00000509431 CABP4P57796 275 aa19.06■□□□□ 0.64
HMGCR-208ENST00000509431 INTS5Q6P9B9 1019 aaKnown RBP19.06■□□□□ 0.64
HMGCR-208ENST00000509431 CNTROBQ8N137 903 aa19.06■□□□□ 0.64
HMGCR-208ENST00000509431 ZNF622Q969S3 477 aaKnown RBP eCLIP19.06■□□□□ 0.64
HMGCR-208ENST00000509431 CAPNS2Q96L46 248 aa19.06■□□□□ 0.64
HMGCR-208ENST00000509431 NARFQ9UHQ1 456 aa19.06■□□□□ 0.64
HMGCR-208ENST00000509431 HACL1Q9UJ83 578 aa19.06■□□□□ 0.64
HMGCR-208ENST00000509431 EMILIN1Q9Y6C2 1016 aa19.06■□□□□ 0.64
HMGCR-208ENST00000509431 ANKRD26Q9UPS8 1709 aa19.05■□□□□ 0.64
HMGCR-208ENST00000509431 SOGA3Q5TF21 947 aa19.05■□□□□ 0.64
HMGCR-208ENST00000509431 GPR101Q96P66 508 aaPredicted RBP19.05■□□□□ 0.64
HMGCR-208ENST00000509431 SOS1Q07889 1333 aaPredicted RBP19.04■□□□□ 0.64
HMGCR-208ENST00000509431 WASHC2AQ641Q2 1341 aa19.04■□□□□ 0.64
HMGCR-208ENST00000509431 CASP8AP2Q9UKL3 1982 aa19.04■□□□□ 0.64
HMGCR-208ENST00000509431 EPHX2P34913 555 aa19.03■□□□□ 0.64
HMGCR-208ENST00000509431 PDE6BP35913 854 aa19.03■□□□□ 0.64
HMGCR-208ENST00000509431 MAP2K2P36507 400 aa19.03■□□□□ 0.64
HMGCR-208ENST00000509431 LTBP1Q14766 1721 aa19.03■□□□□ 0.64
HMGCR-208ENST00000509431 PAXIP1Q6ZW49 1069 aaPredicted RBP19.02■□□□□ 0.64
HMGCR-208ENST00000509431 DDX21Q9NR30 783 aaKnown RBP eCLIP19.02■□□□□ 0.64
HMGCR-208ENST00000509431 ZNF219Q9P2Y4 722 aaPredicted RBP19.02■□□□□ 0.64
HMGCR-208ENST00000509431 CARMIL3Q8ND23 1372 aa19.02■□□□□ 0.64
HMGCR-208ENST00000509431 ANKRD31Q8N7Z5 1873 aa19.01■□□□□ 0.63
HMGCR-208ENST00000509431 PPM1GO15355 546 aaPredicted RBP19.01■□□□□ 0.63
HMGCR-208ENST00000509431 DGKZQ13574 1117 aa19.01■□□□□ 0.63
HMGCR-208ENST00000509431 MAP1SQ66K74 1059 aaPredicted RBP19.01■□□□□ 0.63
HMGCR-208ENST00000509431 BRIP1Q9BX63 1249 aa19.01■□□□□ 0.63
HMGCR-208ENST00000509431 CNKSR1Q969H4 720 aa19■□□□□ 0.63
HMGCR-208ENST00000509431 COL15A1P39059 1388 aa19■□□□□ 0.63
HMGCR-208ENST00000509431 PLEKHO1Q53GL0 409 aaPredicted RBP18.99■□□□□ 0.63
HMGCR-208ENST00000509431 CYP4F22Q6NT55 531 aa18.99■□□□□ 0.63
HMGCR-208ENST00000509431 TSKSQ9UJT2 592 aa18.99■□□□□ 0.63
HMGCR-208ENST00000509431 COL11A2P13942 1736 aaPredicted RBP18.98■□□□□ 0.63
HMGCR-208ENST00000509431 TESK2Q96S53 571 aa18.98■□□□□ 0.63
HMGCR-208ENST00000509431 BCL2L12Q9HB09 334 aa18.98■□□□□ 0.63
HMGCR-208ENST00000509431 TRPM7Q96QT4 1865 aa18.98■□□□□ 0.63
HMGCR-208ENST00000509431 ARFGEF2Q9Y6D5 1785 aa18.98■□□□□ 0.63
HMGCR-208ENST00000509431 SLX4Q8IY92 1834 aa18.97■□□□□ 0.63
HMGCR-208ENST00000509431 ST20-MTHFSA0A0A6YYL1 179 aa18.96■□□□□ 0.63
HMGCR-208ENST00000509431 MTHFSP49914 203 aa18.96■□□□□ 0.63
HMGCR-208ENST00000509431 GRM1Q13255 1194 aa18.96■□□□□ 0.63
HMGCR-208ENST00000509431 AMOTQ4VCS5 1084 aa18.96■□□□□ 0.63
HMGCR-208ENST00000509431 ZNF530Q6P9A1 599 aaPredicted RBP18.96■□□□□ 0.63
HMGCR-208ENST00000509431 CACNA1SQ13698 1873 aa18.95■□□□□ 0.62
HMGCR-208ENST00000509431 STYK1Q6J9G0 422 aa18.95■□□□□ 0.62
HMGCR-208ENST00000509431 DNAJC10Q8IXB1 793 aa18.95■□□□□ 0.62
HMGCR-208ENST00000509431 NFATC2IPQ8NCF5 419 aa18.95■□□□□ 0.62
HMGCR-208ENST00000509431 TLL2Q9Y6L7 1015 aa18.95■□□□□ 0.62
HMGCR-208ENST00000509431 ZNF541Q9H0D2 1346 aa18.95■□□□□ 0.62
HMGCR-208ENST00000509431 PRPF40BQ6NWY9 871 aaKnown RBP18.94■□□□□ 0.62
HMGCR-208ENST00000509431 GCC1Q96CN9 775 aa18.94■□□□□ 0.62
HMGCR-208ENST00000509431 SIN3AQ96ST3 1273 aa18.94■□□□□ 0.62
HMGCR-208ENST00000509431 CYP19A1P11511 503 aaPredicted RBP18.93■□□□□ 0.62
HMGCR-208ENST00000509431 BRPF1P55201 1214 aaPredicted RBP18.93■□□□□ 0.62
HMGCR-208ENST00000509431 C1orf141Q5JVX7 400 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms