RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 DDR1Q08345 913 aa14.67□□□□□ -0.06
RNF4-212ENST00000509258 PIM2Q9P1W9 311 aa14.67□□□□□ -0.06
RNF4-212ENST00000509258 ARFGEF1Q9Y6D6 1849 aa14.66□□□□□ -0.06
RNF4-212ENST00000509258 ZPR1O75312 459 aa14.66□□□□□ -0.06
RNF4-212ENST00000509258 KCNA3P22001 575 aa14.66□□□□□ -0.06
RNF4-212ENST00000509258 DALRD3Q5D0E6 543 aaKnown RBP14.66□□□□□ -0.06
RNF4-212ENST00000509258 SOS1Q07889 1333 aaPredicted RBP14.66□□□□□ -0.06
RNF4-212ENST00000509258 POLRMTO00411 1230 aaKnown RBP14.65□□□□□ -0.06
RNF4-212ENST00000509258 KCNQ3O43525 872 aa14.65□□□□□ -0.06
RNF4-212ENST00000509258 TOMM70O94826 608 aa14.65□□□□□ -0.06
RNF4-212ENST00000509258 CYP19A1P11511 503 aaPredicted RBP14.65□□□□□ -0.06
RNF4-212ENST00000509258 NRXN2Q9P2S2 1712 aa14.65□□□□□ -0.06
RNF4-212ENST00000509258 COL15A1P39059 1388 aa14.64□□□□□ -0.07
RNF4-212ENST00000509258 CEMIPQ8WUJ3 1361 aa14.64□□□□□ -0.07
RNF4-212ENST00000509258 APLP1P51693 650 aa14.64□□□□□ -0.07
RNF4-212ENST00000509258 C9orf131Q5VYM1 1079 aa14.64□□□□□ -0.07
RNF4-212ENST00000509258 SCN7AQ01118 1682 aa14.63□□□□□ -0.07
RNF4-212ENST00000509258 GNAT3A8MTJ3 354 aa14.63□□□□□ -0.07
RNF4-212ENST00000509258 USPL1Q5W0Q7 1092 aa14.63□□□□□ -0.07
RNF4-212ENST00000509258 ZNF496Q96IT1 587 aaPredicted RBP14.63□□□□□ -0.07
RNF4-212ENST00000509258 NMRK2Q9NPI5 230 aa14.63□□□□□ -0.07
RNF4-212ENST00000509258 ZBTB1Q9Y2K1 713 aa14.63□□□□□ -0.07
RNF4-212ENST00000509258 U2AF1L5P0DN76 240 aaPredicted RBP14.62□□□□□ -0.07
RNF4-212ENST00000509258 TM4SF1P30408 202 aa14.62□□□□□ -0.07
RNF4-212ENST00000509258 CHRNA5P30532 468 aa14.62□□□□□ -0.07
RNF4-212ENST00000509258 U2AF1Q01081 240 aaKnown RBP eCLIP14.62□□□□□ -0.07
RNF4-212ENST00000509258 VSIG10Q8N0Z9 540 aa14.62□□□□□ -0.07
RNF4-212ENST00000509258 ANKRD31Q8N7Z5 1873 aa14.62□□□□□ -0.07
RNF4-212ENST00000509258 GAS2L2Q8NHY3 880 aa14.62□□□□□ -0.07
RNF4-212ENST00000509258 CFAP53Q96M91 514 aa14.62□□□□□ -0.07
RNF4-212ENST00000509258 NARFQ9UHQ1 456 aa14.62□□□□□ -0.07
RNF4-212ENST00000509258 BCORQ6W2J9 1755 aa14.62□□□□□ -0.07
RNF4-212ENST00000509258 KDM3BQ7LBC6 1761 aa14.62□□□□□ -0.07
RNF4-212ENST00000509258 DLEC1Q9Y238 1755 aa14.61□□□□□ -0.07
RNF4-212ENST00000509258 DCTN1Q14203 1278 aa14.61□□□□□ -0.07
RNF4-212ENST00000509258 BCL2L12Q9HB09 334 aa14.61□□□□□ -0.07
RNF4-212ENST00000509258 RNF181Q9P0P0 153 aa14.61□□□□□ -0.07
RNF4-212ENST00000509258 KDM2BQ8NHM5 1336 aa14.61□□□□□ -0.07
RNF4-212ENST00000509258 HEG1Q9ULI3 1381 aa14.6□□□□□ -0.07
RNF4-212ENST00000509258 NFIXQ14938 502 aa14.6□□□□□ -0.07
RNF4-212ENST00000509258 C16orf71Q8IYS4 520 aaPredicted RBP14.6□□□□□ -0.07
RNF4-212ENST00000509258 TTC5Q8N0Z6 440 aa14.6□□□□□ -0.07
RNF4-212ENST00000509258 RBM46Q8TBY0 533 aaKnown RBP14.6□□□□□ -0.07
RNF4-212ENST00000509258 PRAMEF22A3QJZ6 481 aa14.59□□□□□ -0.07
RNF4-212ENST00000509258 ZNF790Q6PG37 636 aa14.59□□□□□ -0.07
RNF4-212ENST00000509258 MCM10Q7L590 875 aa14.59□□□□□ -0.07
RNF4-212ENST00000509258 ZC3H4Q9UPT8 1303 aaKnown RBP14.59□□□□□ -0.07
RNF4-212ENST00000509258 SBF1O95248 1867 aa14.59□□□□□ -0.07
RNF4-212ENST00000509258 LAMB4A4D0S4 1761 aa14.58□□□□□ -0.08
RNF4-212ENST00000509258 STARD3NLO95772 234 aa14.58□□□□□ -0.08
RNF4-212ENST00000509258 TEFQ10587 303 aa14.58□□□□□ -0.08
RNF4-212ENST00000509258 COL11A2P13942 1736 aaPredicted RBP14.58□□□□□ -0.08
RNF4-212ENST00000509258 CACNA1SQ13698 1873 aa14.57□□□□□ -0.08
RNF4-212ENST00000509258 CCDC88AQ3V6T2 1871 aa14.57□□□□□ -0.08
RNF4-212ENST00000509258 CANXP27824 592 aaKnown RBP14.57□□□□□ -0.08
RNF4-212ENST00000509258 NUDCQ9Y266 331 aa14.57□□□□□ -0.08
RNF4-212ENST00000509258 TNRC6CQ9HCJ0 1690 aaKnown RBP14.57□□□□□ -0.08
RNF4-212ENST00000509258 A0A087WZG4 1122 aa14.56□□□□□ -0.08
RNF4-212ENST00000509258 SERPINB2P05120 415 aa14.56□□□□□ -0.08
RNF4-212ENST00000509258 PIP4K2AP48426 406 aaPredicted RBP14.56□□□□□ -0.08
RNF4-212ENST00000509258 EIF5P55010 431 aaKnown RBP14.56□□□□□ -0.08
RNF4-212ENST00000509258 FSTL1Q12841 308 aa14.56□□□□□ -0.08
RNF4-212ENST00000509258 PLEKHF1Q96S99 279 aa14.56□□□□□ -0.08
RNF4-212ENST00000509258 CARMIL3Q8ND23 1372 aa14.56□□□□□ -0.08
RNF4-212ENST00000509258 A1BGP04217 495 aa14.55□□□□□ -0.08
RNF4-212ENST00000509258 DDX10Q13206 875 aaKnown RBP14.55□□□□□ -0.08
RNF4-212ENST00000509258 WDR90Q96KV7 1748 aa14.55□□□□□ -0.08
RNF4-212ENST00000509258 BTBD11A6QL63 1104 aa14.54□□□□□ -0.08
RNF4-212ENST00000509258 LMNB1P20700 586 aa14.54□□□□□ -0.08
RNF4-212ENST00000509258 RASSF7Q02833 373 aa14.54□□□□□ -0.08
RNF4-212ENST00000509258 NPM2Q86SE8 214 aaKnown RBP14.54□□□□□ -0.08
RNF4-212ENST00000509258 TTLL6Q8N841 843 aa14.54□□□□□ -0.08
RNF4-212ENST00000509258 TEX13AQ9BXU3 409 aaPredicted RBP14.54□□□□□ -0.08
RNF4-212ENST00000509258 MIS18AQ9NYP9 233 aa14.54□□□□□ -0.08
RNF4-212ENST00000509258 H0YIN7 160 aa14.53□□□□□ -0.08
RNF4-212ENST00000509258 BICDL1Q6ZP65 573 aa14.53□□□□□ -0.08
RNF4-212ENST00000509258 C2CD5Q86YS7 1000 aa14.53□□□□□ -0.08
RNF4-212ENST00000509258 DNAJC5GQ8N7S2 189 aa14.53□□□□□ -0.08
RNF4-212ENST00000509258 FMNL2Q96PY5 1086 aa14.53□□□□□ -0.08
RNF4-212ENST00000509258 THUMPD2Q9BTF0 503 aaKnown RBP14.53□□□□□ -0.08
RNF4-212ENST00000509258 USP16Q9Y5T5 823 aa14.53□□□□□ -0.08
RNF4-212ENST00000509258 RRAGCQ9HB90 399 aa14.52□□□□□ -0.09
RNF4-212ENST00000509258 PDZRN3Q9UPQ7 1066 aa14.52□□□□□ -0.09
RNF4-212ENST00000509258 TBC1D2BQ9UPU7 963 aa14.52□□□□□ -0.09
RNF4-212ENST00000509258 ZNF330Q9Y3S2 320 aaPredicted RBP14.52□□□□□ -0.09
RNF4-212ENST00000509258 NUP98P52948 1817 aa14.51□□□□□ -0.09
RNF4-212ENST00000509258 IL6STP40189 918 aaPredicted RBP14.51□□□□□ -0.09
RNF4-212ENST00000509258 TBC1D9BQ66K14 1250 aa14.51□□□□□ -0.09
RNF4-212ENST00000509258 SMC1BQ8NDV3 1235 aa14.51□□□□□ -0.09
RNF4-212ENST00000509258 TIAM2Q8IVF5 1701 aa14.5□□□□□ -0.09
RNF4-212ENST00000509258 NBPF26B4DH59 902 aa14.5□□□□□ -0.09
RNF4-212ENST00000509258 PDE6BP35913 854 aa14.5□□□□□ -0.09
RNF4-212ENST00000509258 NBPF10Q6P3W6 841 aaKnown RBP14.5□□□□□ -0.09
RNF4-212ENST00000509258 CCDC24Q8N4L8 307 aa14.5□□□□□ -0.09
RNF4-212ENST00000509258 NBPF15Q8N660 670 aa14.5□□□□□ -0.09
RNF4-212ENST00000509258 BRIP1Q9BX63 1249 aa14.5□□□□□ -0.09
RNF4-212ENST00000509258 GLTPD2A6NH11 291 aa14.49□□□□□ -0.09
RNF4-212ENST00000509258 NFKBIEO00221 500 aa14.49□□□□□ -0.09
RNF4-212ENST00000509258 CAMTA2O94983 1202 aa14.49□□□□□ -0.09
RNF4-212ENST00000509258 PRR5LQ6MZQ0 368 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms