RNA–Protein interactions for RNA: ENST00000509109.5

CCSER1-208, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 1,070 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-208ENST00000509109 TBC1D2Q9BYX2 928 aa10.85□□□□□ -0.67
CCSER1-208ENST00000509109 EIF3AQ14152 1382 aaKnown RBP10.85□□□□□ -0.67
CCSER1-208ENST00000509109 EP400Q96L91 3159 aa10.84□□□□□ -0.67
CCSER1-208ENST00000509109 DXOO77932 396 aaKnown RBP10.84□□□□□ -0.67
CCSER1-208ENST00000509109 WAPLQ7Z5K2 1190 aa10.84□□□□□ -0.67
CCSER1-208ENST00000509109 CCDC24Q8N4L8 307 aa10.84□□□□□ -0.67
CCSER1-208ENST00000509109 NGLY1Q96IV0 654 aa10.84□□□□□ -0.67
CCSER1-208ENST00000509109 PLEKHH1Q9ULM0 1364 aa10.84□□□□□ -0.67
CCSER1-208ENST00000509109 ADGRB1O14514 1584 aa10.84□□□□□ -0.67
CCSER1-208ENST00000509109 RGPD8O14715 1765 aaPredicted RBP10.83□□□□□ -0.68
CCSER1-208ENST00000509109 ADAMTS2O95450 1211 aa10.83□□□□□ -0.68
CCSER1-208ENST00000509109 RBM6P78332 1123 aaKnown RBP10.83□□□□□ -0.68
CCSER1-208ENST00000509109 FOXC1Q12948 553 aa10.83□□□□□ -0.68
CCSER1-208ENST00000509109 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.83□□□□□ -0.68
CCSER1-208ENST00000509109 ANKARQ7Z5J8 1434 aa10.83□□□□□ -0.68
CCSER1-208ENST00000509109 ZBTB24O43167 697 aaPredicted RBP10.82□□□□□ -0.68
CCSER1-208ENST00000509109 FOXO3O43524 673 aa10.82□□□□□ -0.68
CCSER1-208ENST00000509109 RPIAP49247 311 aa10.82□□□□□ -0.68
CCSER1-208ENST00000509109 CFAP70Q5T0N1 1121 aa10.82□□□□□ -0.68
CCSER1-208ENST00000509109 RETREG3Q86VR2 466 aa10.82□□□□□ -0.68
CCSER1-208ENST00000509109 RGS12O14924 1447 aa10.82□□□□□ -0.68
CCSER1-208ENST00000509109 ITSN1Q15811 1721 aa10.81□□□□□ -0.68
CCSER1-208ENST00000509109 USP32Q8NFA0 1604 aa10.81□□□□□ -0.68
CCSER1-208ENST00000509109 LCE2BO14633 110 aa10.81□□□□□ -0.68
CCSER1-208ENST00000509109 PRAM1Q96QH2 718 aa10.81□□□□□ -0.68
CCSER1-208ENST00000509109 POGKQ9P215 609 aa10.81□□□□□ -0.68
CCSER1-208ENST00000509109 USP21Q9UK80 565 aa10.81□□□□□ -0.68
CCSER1-208ENST00000509109 TRPC5Q9UL62 973 aaPredicted RBP10.81□□□□□ -0.68
CCSER1-208ENST00000509109 TNS3Q68CZ2 1445 aa10.81□□□□□ -0.68
CCSER1-208ENST00000509109 KIAA1210Q9ULL0 1709 aa10.81□□□□□ -0.68
CCSER1-208ENST00000509109 GDF9O60383 454 aa10.8□□□□□ -0.68
CCSER1-208ENST00000509109 CD2BP2O95400 341 aaKnown RBP10.8□□□□□ -0.68
CCSER1-208ENST00000509109 JUNDP17535 347 aa10.8□□□□□ -0.68
CCSER1-208ENST00000509109 QTRT2Q9H974 415 aaKnown RBP10.8□□□□□ -0.68
CCSER1-208ENST00000509109 ARHGEF28Q8N1W1 1705 aaKnown RBP10.8□□□□□ -0.68
CCSER1-208ENST00000509109 TULP4Q9NRJ4 1543 aa10.79□□□□□ -0.68
CCSER1-208ENST00000509109 ARHGEF10O15013 1369 aa10.79□□□□□ -0.68
CCSER1-208ENST00000509109 ABCA3Q99758 1704 aa10.79□□□□□ -0.68
CCSER1-208ENST00000509109 XPCQ01831 940 aaPredicted RBP10.79□□□□□ -0.68
CCSER1-208ENST00000509109 PSME1Q06323 249 aa10.79□□□□□ -0.68
CCSER1-208ENST00000509109 TRAF7Q6Q0C0 670 aa10.79□□□□□ -0.68
CCSER1-208ENST00000509109 FNBP4Q8N3X1 1017 aaPredicted RBP10.79□□□□□ -0.68
CCSER1-208ENST00000509109 DCAF11Q8TEB1 546 aa10.79□□□□□ -0.68
CCSER1-208ENST00000509109 SPATA31A3Q5VYP0 1347 aa10.79□□□□□ -0.68
CCSER1-208ENST00000509109 SBNO1A3KN83 1393 aa10.78□□□□□ -0.68
CCSER1-208ENST00000509109 NWD2Q9ULI1 1742 aa10.78□□□□□ -0.68
CCSER1-208ENST00000509109 ATRNO75882 1429 aa10.78□□□□□ -0.68
CCSER1-208ENST00000509109 SAFB2Q14151 953 aaKnown RBP eCLIP10.78□□□□□ -0.68
CCSER1-208ENST00000509109 CSPP1Q1MSJ5 1256 aa10.78□□□□□ -0.68
CCSER1-208ENST00000509109 RSBN1LQ6PCB5 846 aaPredicted RBP10.78□□□□□ -0.68
CCSER1-208ENST00000509109 PKD2L1Q9P0L9 805 aa10.78□□□□□ -0.68
CCSER1-208ENST00000509109 PCDHB15Q9Y5E8 787 aa10.78□□□□□ -0.68
CCSER1-208ENST00000509109 ATAD2Q6PL18 1390 aa10.77□□□□□ -0.68
CCSER1-208ENST00000509109 PLCH1Q4KWH8 1693 aa10.77□□□□□ -0.69
CCSER1-208ENST00000509109 PRR20EP86478 221 aa10.77□□□□□ -0.69
CCSER1-208ENST00000509109 PRR20CP86479 221 aa10.77□□□□□ -0.69
CCSER1-208ENST00000509109 PRR20DP86480 221 aa10.77□□□□□ -0.69
CCSER1-208ENST00000509109 PRR20BP86481 221 aa10.77□□□□□ -0.69
CCSER1-208ENST00000509109 PRR20AP86496 221 aa10.77□□□□□ -0.69
CCSER1-208ENST00000509109 DIXDC1Q155Q3 683 aa10.77□□□□□ -0.69
CCSER1-208ENST00000509109 KRT28Q7Z3Y7 464 aa10.77□□□□□ -0.69
CCSER1-208ENST00000509109 TRPM3Q9HCF6 1732 aaPredicted RBP10.76□□□□□ -0.69
CCSER1-208ENST00000509109 MTMR2Q13614 643 aa10.76□□□□□ -0.69
CCSER1-208ENST00000509109 PRR7Q8TB68 274 aa10.76□□□□□ -0.69
CCSER1-208ENST00000509109 TRAK1Q9UPV9 953 aa10.76□□□□□ -0.69
CCSER1-208ENST00000509109 GPRASP1Q5JY77 1395 aa10.76□□□□□ -0.69
CCSER1-208ENST00000509109 BCL9LQ86UU0 1499 aa10.75□□□□□ -0.69
CCSER1-208ENST00000509109 TRIM32Q13049 653 aa10.75□□□□□ -0.69
CCSER1-208ENST00000509109 RIC3Q7Z5B4 369 aa10.75□□□□□ -0.69
CCSER1-208ENST00000509109 NUDT12Q9BQG2 462 aa10.75□□□□□ -0.69
CCSER1-208ENST00000509109 GPBP1L1Q9HC44 474 aaPredicted RBP10.75□□□□□ -0.69
CCSER1-208ENST00000509109 ALS2Q96Q42 1657 aa10.75□□□□□ -0.69
CCSER1-208ENST00000509109 SLIT2O94813 1529 aa10.74□□□□□ -0.69
CCSER1-208ENST00000509109 FAM187AA6NFU0 413 aa10.74□□□□□ -0.69
CCSER1-208ENST00000509109 SPTLC1O15269 473 aa10.74□□□□□ -0.69
CCSER1-208ENST00000509109 PKDCCQ504Y2 493 aa10.74□□□□□ -0.69
CCSER1-208ENST00000509109 MYSM1Q5VVJ2 828 aa10.73□□□□□ -0.69
CCSER1-208ENST00000509109 PTCRAQ6ISU1 281 aaPredicted RBP10.73□□□□□ -0.69
CCSER1-208ENST00000509109 CABLES1Q8TDN4 633 aa10.73□□□□□ -0.69
CCSER1-208ENST00000509109 SRCAPQ6ZRS2 3230 aa10.73□□□□□ -0.69
CCSER1-208ENST00000509109 ATP7BP35670 1465 aa10.73□□□□□ -0.69
CCSER1-208ENST00000509109 TOPAZ1Q8N9V7 1692 aa10.73□□□□□ -0.69
CCSER1-208ENST00000509109 WASLO00401 505 aaPredicted RBP10.72□□□□□ -0.69
CCSER1-208ENST00000509109 UNC5CLQ8IV45 518 aa10.72□□□□□ -0.69
CCSER1-208ENST00000509109 HIRIP3Q9BW71 556 aaPredicted RBP10.72□□□□□ -0.69
CCSER1-208ENST00000509109 LIMD1Q9UGP4 676 aa10.72□□□□□ -0.69
CCSER1-208ENST00000509109 COL14A1Q05707 1796 aaKnown RBP10.72□□□□□ -0.69
CCSER1-208ENST00000509109 GLI3P10071 1580 aa10.71□□□□□ -0.69
CCSER1-208ENST00000509109 RALGAPBQ86X10 1494 aa10.71□□□□□ -0.69
CCSER1-208ENST00000509109 PMFBP1Q8TBY8 1022 aa10.71□□□□□ -0.69
CCSER1-208ENST00000509109 GJD4Q96KN9 370 aaPredicted RBP10.71□□□□□ -0.69
CCSER1-208ENST00000509109 CRYBG1Q9Y4K1 1723 aa10.7□□□□□ -0.7
CCSER1-208ENST00000509109 CFAP99D6REC4 459 aa10.7□□□□□ -0.7
CCSER1-208ENST00000509109 GJA5P36382 358 aa10.7□□□□□ -0.7
CCSER1-208ENST00000509109 NGDNQ8NEJ9 315 aaKnown RBP10.7□□□□□ -0.7
CCSER1-208ENST00000509109 ZBTB3Q9H5J0 574 aa10.7□□□□□ -0.7
CCSER1-208ENST00000509109 NRAPQ86VF7 1730 aa10.7□□□□□ -0.7
CCSER1-208ENST00000509109 QRICH2Q9H0J4 1663 aa10.69□□□□□ -0.7
CCSER1-208ENST00000509109 PRR36Q9H6K5 1346 aa10.69□□□□□ -0.7
CCSER1-208ENST00000509109 SPDYE5A6NIY4 337 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms