RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 SIPA1L3O60292 1781 aaPredicted RBP24.7■■□□□ 1.54
UBE3D-207ENST00000509102 SRP68Q9UHB9 627 aaKnown RBP24.68■■□□□ 1.54
UBE3D-207ENST00000509102 ZBTB1Q9Y2K1 713 aa24.68■■□□□ 1.54
UBE3D-207ENST00000509102 COL15A1P39059 1388 aa24.67■■□□□ 1.54
UBE3D-207ENST00000509102 CANXP27824 592 aaKnown RBP24.67■■□□□ 1.54
UBE3D-207ENST00000509102 A0A087WZG4 1122 aa24.66■■□□□ 1.54
UBE3D-207ENST00000509102 DCTN1Q14203 1278 aa24.65■■□□□ 1.54
UBE3D-207ENST00000509102 NFE2L2Q16236 605 aa24.65■■□□□ 1.54
UBE3D-207ENST00000509102 PLEKHF1Q96S99 279 aa24.65■■□□□ 1.54
UBE3D-207ENST00000509102 FKBP8Q14318 412 aa24.64■■□□□ 1.54
UBE3D-207ENST00000509102 TAF7Q15545 349 aaPredicted RBP24.64■■□□□ 1.54
UBE3D-207ENST00000509102 USPL1Q5W0Q7 1092 aa24.64■■□□□ 1.54
UBE3D-207ENST00000509102 NARFQ9UHQ1 456 aa24.64■■□□□ 1.54
UBE3D-207ENST00000509102 CHD4Q14839 1912 aa24.64■■□□□ 1.53
UBE3D-207ENST00000509102 TGFB2P61812 414 aa24.63■■□□□ 1.53
UBE3D-207ENST00000509102 PNISRQ8TF01 805 aaKnown RBP24.63■■□□□ 1.53
UBE3D-207ENST00000509102 UTRNP46939 3433 aa24.62■■□□□ 1.53
UBE3D-207ENST00000509102 YBX3P16989 372 aaKnown RBP eCLIP24.62■■□□□ 1.53
UBE3D-207ENST00000509102 WDR43Q15061 677 aaKnown RBP eCLIP24.62■■□□□ 1.53
UBE3D-207ENST00000509102 ZNF330Q9Y3S2 320 aaPredicted RBP24.62■■□□□ 1.53
UBE3D-207ENST00000509102 SNRPA1P09661 255 aaKnown RBP24.61■■□□□ 1.53
UBE3D-207ENST00000509102 C10orf71Q711Q0 1435 aa24.61■■□□□ 1.53
UBE3D-207ENST00000509102 GOLGB1Q14789 3259 aaKnown RBP24.6■■□□□ 1.53
UBE3D-207ENST00000509102 KCNQ3O43525 872 aa24.6■■□□□ 1.53
UBE3D-207ENST00000509102 IL6STP40189 918 aaPredicted RBP24.6■■□□□ 1.53
UBE3D-207ENST00000509102 EIF5P55010 431 aaKnown RBP24.6■■□□□ 1.53
UBE3D-207ENST00000509102 LMOD3Q0VAK6 560 aa24.58■■□□□ 1.53
UBE3D-207ENST00000509102 PRKRIP1Q9H875 184 aaPredicted RBP24.58■■□□□ 1.53
UBE3D-207ENST00000509102 KIF13BQ9NQT8 1826 aa24.56■■□□□ 1.52
UBE3D-207ENST00000509102 TM4SF1P30408 202 aa24.56■■□□□ 1.52
UBE3D-207ENST00000509102 DDR1Q08345 913 aa24.56■■□□□ 1.52
UBE3D-207ENST00000509102 WWC3Q9ULE0 1092 aa24.56■■□□□ 1.52
UBE3D-207ENST00000509102 DLG5Q8TDM6 1919 aa24.56■■□□□ 1.52
UBE3D-207ENST00000509102 PXDNLA1KZ92 1463 aa24.56■■□□□ 1.52
UBE3D-207ENST00000509102 POLRMTO00411 1230 aaKnown RBP24.55■■□□□ 1.52
UBE3D-207ENST00000509102 A1BGP04217 495 aa24.55■■□□□ 1.52
UBE3D-207ENST00000509102 RIPK4P57078 832 aa24.55■■□□□ 1.52
UBE3D-207ENST00000509102 A0A0G2JLW4 131 aa24.54■■□□□ 1.52
UBE3D-207ENST00000509102 NFIXQ14938 502 aa24.54■■□□□ 1.52
UBE3D-207ENST00000509102 USP16Q9Y5T5 823 aa24.54■■□□□ 1.52
UBE3D-207ENST00000509102 ZNF784Q8NCA9 323 aaPredicted RBP24.53■■□□□ 1.52
UBE3D-207ENST00000509102 MIS18AQ9NYP9 233 aa24.53■■□□□ 1.52
UBE3D-207ENST00000509102 DPEP1P16444 411 aa24.52■■□□□ 1.52
UBE3D-207ENST00000509102 TBC1D2BQ9UPU7 963 aa24.52■■□□□ 1.52
UBE3D-207ENST00000509102 BCS1LQ9Y276 419 aa24.52■■□□□ 1.52
UBE3D-207ENST00000509102 TMPOP42166 694 aaKnown RBP24.51■■□□□ 1.51
UBE3D-207ENST00000509102 THUMPD2Q9BTF0 503 aaKnown RBP24.51■■□□□ 1.51
UBE3D-207ENST00000509102 SERPINB2P05120 415 aa24.5■■□□□ 1.51
UBE3D-207ENST00000509102 BICDL1Q6ZP65 573 aa24.5■■□□□ 1.51
UBE3D-207ENST00000509102 DZIP3Q86Y13 1208 aaKnown RBP24.5■■□□□ 1.51
UBE3D-207ENST00000509102 RUNDC1Q96C34 613 aa24.5■■□□□ 1.51
UBE3D-207ENST00000509102 BCL2L12Q9HB09 334 aa24.5■■□□□ 1.51
UBE3D-207ENST00000509102 PRAMEF22A3QJZ6 481 aa24.49■■□□□ 1.51
UBE3D-207ENST00000509102 CCDC146Q8IYE0 955 aa24.49■■□□□ 1.51
UBE3D-207ENST00000509102 PIM2Q9P1W9 311 aa24.49■■□□□ 1.51
UBE3D-207ENST00000509102 ZNF652Q9Y2D9 606 aa24.49■■□□□ 1.51
UBE3D-207ENST00000509102 N4BP2Q86UW6 1770 aaPredicted RBP24.49■■□□□ 1.51
UBE3D-207ENST00000509102 NPHP1O15259 732 aa24.48■■□□□ 1.51
UBE3D-207ENST00000509102 TSPYL4Q9UJ04 414 aa24.48■■□□□ 1.51
UBE3D-207ENST00000509102 SCN7AQ01118 1682 aa24.47■■□□□ 1.51
UBE3D-207ENST00000509102 NEUROD2Q15784 382 aa24.47■■□□□ 1.51
UBE3D-207ENST00000509102 CARMIL3Q8ND23 1372 aa24.46■■□□□ 1.51
UBE3D-207ENST00000509102 ZNF316A6NFI3 1004 aaPredicted RBP24.46■■□□□ 1.51
UBE3D-207ENST00000509102 PIP4K2AP48426 406 aaPredicted RBP24.46■■□□□ 1.51
UBE3D-207ENST00000509102 EIF4A1P60842 406 aaKnown RBP24.46■■□□□ 1.51
UBE3D-207ENST00000509102 TBC1D9BQ66K14 1250 aa24.46■■□□□ 1.51
UBE3D-207ENST00000509102 SETDB2Q96T68 719 aa24.46■■□□□ 1.51
UBE3D-207ENST00000509102 BABAM1Q9NWV8 329 aa24.46■■□□□ 1.51
UBE3D-207ENST00000509102 ADAMTS8Q9UP79 889 aa24.46■■□□□ 1.51
UBE3D-207ENST00000509102 KDM3BQ7LBC6 1761 aa24.46■■□□□ 1.51
UBE3D-207ENST00000509102 KIAA1551Q9HCM1 1747 aa24.46■■□□□ 1.51
UBE3D-207ENST00000509102 GIGYF1O75420 1035 aaPredicted RBP24.45■■□□□ 1.5
UBE3D-207ENST00000509102 CAMTA2O94983 1202 aa24.45■■□□□ 1.5
UBE3D-207ENST00000509102 DALRD3Q5D0E6 543 aaKnown RBP24.45■■□□□ 1.5
UBE3D-207ENST00000509102 RRP7AQ9Y3A4 280 aaKnown RBP24.45■■□□□ 1.5
UBE3D-207ENST00000509102 LAMB4A4D0S4 1761 aa24.44■■□□□ 1.5
UBE3D-207ENST00000509102 CLEC4GQ6UXB4 293 aa24.43■■□□□ 1.5
UBE3D-207ENST00000509102 KCNA3P22001 575 aa24.42■■□□□ 1.5
UBE3D-207ENST00000509102 CHRNA5P30532 468 aa24.42■■□□□ 1.5
UBE3D-207ENST00000509102 ARHGAP27Q6ZUM4 889 aa24.42■■□□□ 1.5
UBE3D-207ENST00000509102 AFDNP55196 1824 aaKnown RBP24.42■■□□□ 1.5
UBE3D-207ENST00000509102 NRXN2Q9P2S2 1712 aa24.41■■□□□ 1.5
UBE3D-207ENST00000509102 RGL2O15211 777 aa24.41■■□□□ 1.5
UBE3D-207ENST00000509102 PDZRN3Q9UPQ7 1066 aa24.41■■□□□ 1.5
UBE3D-207ENST00000509102 NBPF26B4DH59 902 aa24.4■■□□□ 1.5
UBE3D-207ENST00000509102 H0YIN7 160 aa24.4■■□□□ 1.5
UBE3D-207ENST00000509102 ST5P78524 1137 aa24.4■■□□□ 1.5
UBE3D-207ENST00000509102 NBPF10Q6P3W6 841 aaKnown RBP24.4■■□□□ 1.5
UBE3D-207ENST00000509102 NBPF15Q8N660 670 aa24.4■■□□□ 1.5
UBE3D-207ENST00000509102 CNBD1Q8NA66 436 aa24.4■■□□□ 1.5
UBE3D-207ENST00000509102 PDE6BP35913 854 aa24.39■■□□□ 1.49
UBE3D-207ENST00000509102 BCORQ6W2J9 1755 aa24.39■■□□□ 1.49
UBE3D-207ENST00000509102 BRCA1P38398 1863 aaKnown RBP24.38■■□□□ 1.49
UBE3D-207ENST00000509102 ERBB4Q15303 1308 aa24.38■■□□□ 1.49
UBE3D-207ENST00000509102 KIF6Q6ZMV9 814 aa24.38■■□□□ 1.49
UBE3D-207ENST00000509102 C2CD5Q86YS7 1000 aa24.38■■□□□ 1.49
UBE3D-207ENST00000509102 BRIP1Q9BX63 1249 aa24.38■■□□□ 1.49
UBE3D-207ENST00000509102 ANP32CO43423 234 aa24.37■■□□□ 1.49
UBE3D-207ENST00000509102 NBPF5PQ86XG9 351 aaPredicted RBP24.37■■□□□ 1.49
UBE3D-207ENST00000509102 NGEFQ8N5V2 710 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms