RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 ZRANB2O95218 330 aaKnown RBP eCLIP11.89□□□□□ -0.51
PDGFRA-207ENST00000509092 ZNF75DP51815 510 aa11.89□□□□□ -0.51
PDGFRA-207ENST00000509092 ST5P78524 1137 aa11.89□□□□□ -0.51
PDGFRA-207ENST00000509092 UBXN6Q9BZV1 441 aa11.89□□□□□ -0.51
PDGFRA-207ENST00000509092 DONSONQ9NYP3 566 aa11.89□□□□□ -0.51
PDGFRA-207ENST00000509092 KIAA1210Q9ULL0 1709 aa11.89□□□□□ -0.51
PDGFRA-207ENST00000509092 ERVK-7P63135 1459 aa11.89□□□□□ -0.51
PDGFRA-207ENST00000509092 EP400NLQ6ZTU2 488 aa11.89□□□□□ -0.51
PDGFRA-207ENST00000509092 CEP120Q8N960 986 aa11.89□□□□□ -0.51
PDGFRA-207ENST00000509092 CACTINQ8WUQ7 758 aaKnown RBP11.89□□□□□ -0.51
PDGFRA-207ENST00000509092 DRC1Q96MC2 740 aa11.89□□□□□ -0.51
PDGFRA-207ENST00000509092 C1orf115Q9H7X2 142 aa11.89□□□□□ -0.51
PDGFRA-207ENST00000509092 ELP1O95163 1332 aa11.88□□□□□ -0.51
PDGFRA-207ENST00000509092 POGZQ7Z3K3 1410 aa11.88□□□□□ -0.51
PDGFRA-207ENST00000509092 KIF2AO00139 706 aaPredicted RBP11.88□□□□□ -0.51
PDGFRA-207ENST00000509092 ATP8B1O43520 1251 aa11.88□□□□□ -0.51
PDGFRA-207ENST00000509092 NEMFO60524 1076 aa11.88□□□□□ -0.51
PDGFRA-207ENST00000509092 SDSP20132 328 aa11.88□□□□□ -0.51
PDGFRA-207ENST00000509092 MAGEA9P43362 315 aa11.88□□□□□ -0.51
PDGFRA-207ENST00000509092 CCDC91Q7Z6B0 441 aa11.88□□□□□ -0.51
PDGFRA-207ENST00000509092 MORC1Q86VD1 984 aa11.88□□□□□ -0.51
PDGFRA-207ENST00000509092 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.88□□□□□ -0.51
PDGFRA-207ENST00000509092 CFAP53Q96M91 514 aa11.88□□□□□ -0.51
PDGFRA-207ENST00000509092 DEF6Q9H4E7 631 aa11.88□□□□□ -0.51
PDGFRA-207ENST00000509092 USP32Q8NFA0 1604 aa11.88□□□□□ -0.51
PDGFRA-207ENST00000509092 RGS12O14924 1447 aa11.88□□□□□ -0.51
PDGFRA-207ENST00000509092 AK7Q96M32 723 aa11.88□□□□□ -0.51
PDGFRA-207ENST00000509092 ARGLU1Q9NWB6 273 aaPredicted RBP11.88□□□□□ -0.51
PDGFRA-207ENST00000509092 PSD3Q9NYI0 1048 aa11.88□□□□□ -0.51
PDGFRA-207ENST00000509092 AATKQ6ZMQ8 1374 aa11.88□□□□□ -0.51
PDGFRA-207ENST00000509092 KNDC1Q76NI1 1749 aa11.87□□□□□ -0.51
PDGFRA-207ENST00000509092 RAPGEF3O95398 923 aa11.87□□□□□ -0.51
PDGFRA-207ENST00000509092 CDC25BP30305 580 aa11.87□□□□□ -0.51
PDGFRA-207ENST00000509092 PACS2Q86VP3 889 aa11.87□□□□□ -0.51
PDGFRA-207ENST00000509092 PTCH1Q13635 1447 aa11.87□□□□□ -0.51
PDGFRA-207ENST00000509092 RICTORQ6R327 1708 aa11.87□□□□□ -0.51
PDGFRA-207ENST00000509092 KIF1CO43896 1103 aaKnown RBP11.87□□□□□ -0.51
PDGFRA-207ENST00000509092 ERCC6LQ2NKX8 1250 aa11.87□□□□□ -0.51
PDGFRA-207ENST00000509092 TMCO3Q6UWJ1 677 aa11.87□□□□□ -0.51
PDGFRA-207ENST00000509092 FILIP1Q7Z7B0 1213 aa11.87□□□□□ -0.51
PDGFRA-207ENST00000509092 L2HGDHQ9H9P8 463 aa11.87□□□□□ -0.51
PDGFRA-207ENST00000509092 ZFYVE16Q7Z3T8 1539 aa11.86□□□□□ -0.51
PDGFRA-207ENST00000509092 USP27XA6NNY8 438 aa11.86□□□□□ -0.51
PDGFRA-207ENST00000509092 SATB1Q01826 763 aa11.86□□□□□ -0.51
PDGFRA-207ENST00000509092 TRIM5Q9C035 493 aa11.86□□□□□ -0.51
PDGFRA-207ENST00000509092 CXorf56Q9H5V9 222 aa11.86□□□□□ -0.51
PDGFRA-207ENST00000509092 KCND1Q9NSA2 647 aa11.86□□□□□ -0.51
PDGFRA-207ENST00000509092 EXOC6BQ9Y2D4 811 aa11.86□□□□□ -0.51
PDGFRA-207ENST00000509092 INO80Q9ULG1 1556 aaPredicted RBP11.86□□□□□ -0.51
PDGFRA-207ENST00000509092 ZSCAN22P10073 491 aaPredicted RBP11.86□□□□□ -0.51
PDGFRA-207ENST00000509092 GSCP56915 257 aaPredicted RBP11.86□□□□□ -0.51
PDGFRA-207ENST00000509092 SWT1Q5T5J6 900 aaKnown RBP11.86□□□□□ -0.51
PDGFRA-207ENST00000509092 SUGP1Q8IWZ8 645 aaKnown RBP11.86□□□□□ -0.51
PDGFRA-207ENST00000509092 CLIP2Q9UDT6 1046 aa11.86□□□□□ -0.51
PDGFRA-207ENST00000509092 MRVI1Q9Y6F6 885 aa11.86□□□□□ -0.51
PDGFRA-207ENST00000509092 ATP7AQ04656 1500 aa11.85□□□□□ -0.51
PDGFRA-207ENST00000509092 NPHP1O15259 732 aa11.85□□□□□ -0.51
PDGFRA-207ENST00000509092 TYRO3Q06418 890 aa11.85□□□□□ -0.51
PDGFRA-207ENST00000509092 LUZP1Q86V48 1076 aa11.85□□□□□ -0.51
PDGFRA-207ENST00000509092 LRRC8AQ8IWT6 810 aa11.85□□□□□ -0.51
PDGFRA-207ENST00000509092 EXOC4Q96A65 974 aa11.85□□□□□ -0.51
PDGFRA-207ENST00000509092 ATP6V1DQ9Y5K8 247 aa11.85□□□□□ -0.51
PDGFRA-207ENST00000509092 ABCA6Q8N139 1617 aa11.85□□□□□ -0.51
PDGFRA-207ENST00000509092 KIDINS220Q9ULH0 1771 aa11.85□□□□□ -0.51
PDGFRA-207ENST00000509092 IVLP07476 585 aa11.85□□□□□ -0.51
PDGFRA-207ENST00000509092 OAS2P29728 719 aaKnown RBP11.85□□□□□ -0.51
PDGFRA-207ENST00000509092 ANAPC15P60006 121 aa11.85□□□□□ -0.51
PDGFRA-207ENST00000509092 MNS1Q8NEH6 495 aa11.85□□□□□ -0.51
PDGFRA-207ENST00000509092 TDRD7Q8NHU6 1098 aaKnown RBP11.85□□□□□ -0.51
PDGFRA-207ENST00000509092 NSD3Q9BZ95 1437 aa11.85□□□□□ -0.51
PDGFRA-207ENST00000509092 PATL2C9JE40 543 aaKnown RBP11.84□□□□□ -0.51
PDGFRA-207ENST00000509092 FIBPO43427 364 aa11.84□□□□□ -0.51
PDGFRA-207ENST00000509092 MCCP23508 829 aa11.84□□□□□ -0.51
PDGFRA-207ENST00000509092 SART3Q15020 963 aaKnown RBP11.84□□□□□ -0.51
PDGFRA-207ENST00000509092 CCDC144BQ3MJ40 725 aa11.84□□□□□ -0.51
PDGFRA-207ENST00000509092 TPRNQ4KMQ1 711 aa11.84□□□□□ -0.51
PDGFRA-207ENST00000509092 ARHGAP29Q52LW3 1261 aa11.84□□□□□ -0.51
PDGFRA-207ENST00000509092 CCDC144CPQ8IYA2 1237 aa11.84□□□□□ -0.51
PDGFRA-207ENST00000509092 ARHGAP45Q92619 1136 aa11.84□□□□□ -0.51
PDGFRA-207ENST00000509092 ZNF428Q96B54 188 aa11.84□□□□□ -0.51
PDGFRA-207ENST00000509092 DCTPP1Q9H773 170 aa11.84□□□□□ -0.51
PDGFRA-207ENST00000509092 CBX8Q9HC52 389 aa11.84□□□□□ -0.51
PDGFRA-207ENST00000509092 TRIM35Q9UPQ4 493 aa11.84□□□□□ -0.51
PDGFRA-207ENST00000509092 FRMPD1Q5SYB0 1578 aa11.84□□□□□ -0.51
PDGFRA-207ENST00000509092 ACTN2P35609 894 aa11.84□□□□□ -0.51
PDGFRA-207ENST00000509092 MAP3K11Q16584 847 aa11.84□□□□□ -0.51
PDGFRA-207ENST00000509092 REXO1L1PQ8IX06 675 aa11.84□□□□□ -0.51
PDGFRA-207ENST00000509092 MED4Q9NPJ6 270 aa11.84□□□□□ -0.51
PDGFRA-207ENST00000509092 U2AF1L5P0DN76 240 aaPredicted RBP11.83□□□□□ -0.52
PDGFRA-207ENST00000509092 MTHFSP49914 203 aa11.83□□□□□ -0.52
PDGFRA-207ENST00000509092 U2AF1Q01081 240 aaKnown RBP eCLIP11.83□□□□□ -0.52
PDGFRA-207ENST00000509092 CCDC93Q567U6 631 aa11.83□□□□□ -0.52
PDGFRA-207ENST00000509092 MCTP2Q6DN12 878 aa11.83□□□□□ -0.52
PDGFRA-207ENST00000509092 EGFL6Q8IUX8 553 aa11.83□□□□□ -0.52
PDGFRA-207ENST00000509092 CCAR2Q8N163 923 aaKnown RBP11.83□□□□□ -0.52
PDGFRA-207ENST00000509092 PPM1EQ8WY54 764 aa11.83□□□□□ -0.52
PDGFRA-207ENST00000509092 HECW2Q9P2P5 1572 aa11.83□□□□□ -0.52
PDGFRA-207ENST00000509092 TUBGCP6Q96RT7 1819 aa11.83□□□□□ -0.52
PDGFRA-207ENST00000509092 TMPOP42166 694 aaKnown RBP11.82□□□□□ -0.52
PDGFRA-207ENST00000509092 GRIPAP1Q4V328 841 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms