RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 PI4KAP1Q8N8J0 262 aa11.42□□□□□ -0.58
HTT-205ENST00000509043 NECTIN2Q92692 538 aa11.42□□□□□ -0.58
HTT-205ENST00000509043 CARD10Q9BWT7 1032 aa11.42□□□□□ -0.58
HTT-205ENST00000509043 COL5A2P05997 1499 aaPredicted RBP11.42□□□□□ -0.58
HTT-205ENST00000509043 ADCY9O60503 1353 aa11.41□□□□□ -0.58
HTT-205ENST00000509043 ABCA3Q99758 1704 aa11.41□□□□□ -0.58
HTT-205ENST00000509043 ERVV-2B6SEH9 535 aa11.41□□□□□ -0.58
HTT-205ENST00000509043 KCNQ3O43525 872 aa11.41□□□□□ -0.58
HTT-205ENST00000509043 SNRPA1P09661 255 aaKnown RBP11.41□□□□□ -0.58
HTT-205ENST00000509043 NKX1-1Q15270 411 aaPredicted RBP11.41□□□□□ -0.58
HTT-205ENST00000509043 TBC1D9Q6ZT07 1266 aa11.41□□□□□ -0.58
HTT-205ENST00000509043 PIAS4Q8N2W9 510 aaPredicted RBP11.41□□□□□ -0.58
HTT-205ENST00000509043 LINS1Q8NG48 757 aa11.41□□□□□ -0.58
HTT-205ENST00000509043 CABLES1Q8TDN4 633 aa11.41□□□□□ -0.58
HTT-205ENST00000509043 SNX21Q969T3 373 aa11.41□□□□□ -0.58
HTT-205ENST00000509043 FMNL2Q96PY5 1086 aa11.41□□□□□ -0.58
HTT-205ENST00000509043 STAP2Q9UGK3 403 aa11.41□□□□□ -0.58
HTT-205ENST00000509043 LRRFIP2Q9Y608 721 aaKnown RBP11.41□□□□□ -0.58
HTT-205ENST00000509043 UTYO14607 1347 aa11.4□□□□□ -0.58
HTT-205ENST00000509043 CYP27B1O15528 508 aa11.4□□□□□ -0.58
HTT-205ENST00000509043 PLEKHG5O94827 1062 aa11.4□□□□□ -0.58
HTT-205ENST00000509043 GSPT1P15170 499 aaKnown RBP11.4□□□□□ -0.58
HTT-205ENST00000509043 CHRNA2Q15822 529 aa11.4□□□□□ -0.58
HTT-205ENST00000509043 EPB41L2O43491 1005 aaKnown RBP11.39□□□□□ -0.59
HTT-205ENST00000509043 REC8O95072 547 aa11.39□□□□□ -0.59
HTT-205ENST00000509043 IL2RBP14784 551 aa11.39□□□□□ -0.59
HTT-205ENST00000509043 CABP4P57796 275 aa11.39□□□□□ -0.59
HTT-205ENST00000509043 NEXNQ0ZGT2 675 aa11.39□□□□□ -0.59
HTT-205ENST00000509043 LARP1Q6PKG0 1096 aaKnown RBP11.39□□□□□ -0.59
HTT-205ENST00000509043 TOM1L2Q6ZVM7 507 aa11.39□□□□□ -0.59
HTT-205ENST00000509043 ERC1Q8IUD2 1116 aa11.39□□□□□ -0.59
HTT-205ENST00000509043 NFATC2IPQ8NCF5 419 aa11.39□□□□□ -0.59
HTT-205ENST00000509043 ZCRB1Q8TBF4 217 aaKnown RBP11.39□□□□□ -0.59
HTT-205ENST00000509043 SALL3Q9BXA9 1300 aa11.38□□□□□ -0.59
HTT-205ENST00000509043 PDE1AP54750 535 aa11.38□□□□□ -0.59
HTT-205ENST00000509043 HSCBQ8IWL3 235 aa11.38□□□□□ -0.59
HTT-205ENST00000509043 KIF1BPQ96EK5 621 aa11.38□□□□□ -0.59
HTT-205ENST00000509043 MAP3K2Q9Y2U5 619 aa11.38□□□□□ -0.59
HTT-205ENST00000509043 COL15A1P39059 1388 aa11.38□□□□□ -0.59
HTT-205ENST00000509043 PNMA6EA0A0J9YXQ4 647 aa11.37□□□□□ -0.59
HTT-205ENST00000509043 SDSP20132 328 aa11.37□□□□□ -0.59
HTT-205ENST00000509043 MX1P20591 662 aa11.37□□□□□ -0.59
HTT-205ENST00000509043 PDIA6Q15084 440 aa11.37□□□□□ -0.59
HTT-205ENST00000509043 PPP1R42Q7Z4L9 355 aa11.37□□□□□ -0.59
HTT-205ENST00000509043 TBC1D2Q9BYX2 928 aa11.37□□□□□ -0.59
HTT-205ENST00000509043 C9orf78Q9NZ63 289 aaPredicted RBP11.37□□□□□ -0.59
HTT-205ENST00000509043 LAMB4A4D0S4 1761 aa11.36□□□□□ -0.59
HTT-205ENST00000509043 AHDC1Q5TGY3 1603 aaPredicted RBP11.36□□□□□ -0.59
HTT-205ENST00000509043 SRGAP3O43295 1099 aa11.36□□□□□ -0.59
HTT-205ENST00000509043 ZNF496Q96IT1 587 aaPredicted RBP11.36□□□□□ -0.59
HTT-205ENST00000509043 EXOC6BQ9Y2D4 811 aa11.36□□□□□ -0.59
HTT-205ENST00000509043 COL22A1Q8NFW1 1626 aaPredicted RBP11.35□□□□□ -0.59
HTT-205ENST00000509043 GRM8O00222 908 aa11.35□□□□□ -0.59
HTT-205ENST00000509043 SMARCA5O60264 1052 aaPredicted RBP11.35□□□□□ -0.59
HTT-205ENST00000509043 SURF6O75683 361 aaKnown RBP11.35□□□□□ -0.59
HTT-205ENST00000509043 NBPF7P0C2Y1 421 aaPredicted RBP11.35□□□□□ -0.59
HTT-205ENST00000509043 SLC4A3P48751 1232 aa11.35□□□□□ -0.59
HTT-205ENST00000509043 EVA1CP58658 441 aa11.35□□□□□ -0.59
HTT-205ENST00000509043 RABEP1Q15276 862 aa11.35□□□□□ -0.59
HTT-205ENST00000509043 RIC3Q7Z5B4 369 aa11.35□□□□□ -0.59
HTT-205ENST00000509043 C16orf71Q8IYS4 520 aaPredicted RBP11.35□□□□□ -0.59
HTT-205ENST00000509043 METTL22Q9BUU2 404 aaPredicted RBP11.35□□□□□ -0.59
HTT-205ENST00000509043 COL14A1Q05707 1796 aaKnown RBP11.35□□□□□ -0.59
HTT-205ENST00000509043 TTC41PQ6P2S7 1318 aa11.35□□□□□ -0.59
HTT-205ENST00000509043 USP42Q9H9J4 1324 aaKnown RBP11.35□□□□□ -0.59
HTT-205ENST00000509043 C5P01031 1676 aa11.34□□□□□ -0.59
HTT-205ENST00000509043 ERC2O15083 957 aa11.34□□□□□ -0.59
HTT-205ENST00000509043 NBR1Q14596 966 aa11.34□□□□□ -0.59
HTT-205ENST00000509043 PROSER3Q2NL68 480 aa11.34□□□□□ -0.59
HTT-205ENST00000509043 RHPN1Q8TCX5 695 aa11.34□□□□□ -0.59
HTT-205ENST00000509043 GPATCH3Q96I76 525 aa11.34□□□□□ -0.59
HTT-205ENST00000509043 PAPPAQ13219 1627 aa11.34□□□□□ -0.59
HTT-205ENST00000509043 TNS2Q63HR2 1409 aa11.34□□□□□ -0.59
HTT-205ENST00000509043 APBB1O00213 710 aa11.33□□□□□ -0.6
HTT-205ENST00000509043 SLC39A6Q13433 755 aa11.33□□□□□ -0.6
HTT-205ENST00000509043 ANKRD13DQ6ZTN6 518 aa11.33□□□□□ -0.6
HTT-205ENST00000509043 OTUD7AQ8TE49 926 aaPredicted RBP11.33□□□□□ -0.6
HTT-205ENST00000509043 TEX13AQ9BXU3 409 aaPredicted RBP11.33□□□□□ -0.6
HTT-205ENST00000509043 USP26Q9BXU7 913 aa11.33□□□□□ -0.6
HTT-205ENST00000509043 ANTXR1Q9H6X2 564 aa11.33□□□□□ -0.6
HTT-205ENST00000509043 CIZ1Q9ULV3 898 aaPredicted RBP11.33□□□□□ -0.6
HTT-205ENST00000509043 UBR2Q8IWV8 1755 aa11.33□□□□□ -0.6
HTT-205ENST00000509043 ANXA1P04083 346 aa11.32□□□□□ -0.6
HTT-205ENST00000509043 MCCP23508 829 aa11.32□□□□□ -0.6
HTT-205ENST00000509043 NFKBIBQ15653 356 aa11.32□□□□□ -0.6
HTT-205ENST00000509043 COPS6Q7L5N1 327 aa11.32□□□□□ -0.6
HTT-205ENST00000509043 LRP10Q7Z4F1 713 aa11.32□□□□□ -0.6
HTT-205ENST00000509043 VSIG10Q8N0Z9 540 aa11.32□□□□□ -0.6
HTT-205ENST00000509043 CLASRPQ8N2M8 674 aaKnown RBP11.32□□□□□ -0.6
HTT-205ENST00000509043 PLBD2Q8NHP8 589 aa11.32□□□□□ -0.6
HTT-205ENST00000509043 XAGE3Q8WTP9 111 aa11.32□□□□□ -0.6
HTT-205ENST00000509043 CDCA7Q9BWT1 371 aaPredicted RBP11.32□□□□□ -0.6
HTT-205ENST00000509043 CHMP5Q9NZZ3 219 aa11.32□□□□□ -0.6
HTT-205ENST00000509043 GLI3P10071 1580 aa11.32□□□□□ -0.6
HTT-205ENST00000509043 LRP6O75581 1613 aa11.31□□□□□ -0.6
HTT-205ENST00000509043 PRAMEF22A3QJZ6 481 aa11.31□□□□□ -0.6
HTT-205ENST00000509043 NEURL1BA8MQ27 555 aa11.31□□□□□ -0.6
HTT-205ENST00000509043 GCKRQ14397 625 aa11.31□□□□□ -0.6
HTT-205ENST00000509043 TUBGCP6Q96RT7 1819 aa11.3□□□□□ -0.6
HTT-205ENST00000509043 PLCH1Q4KWH8 1693 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms