RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 PCDHGC4Q9Y5F7 938 aa5.75□□□□□ -1.49
DEPDC1B-204ENST00000509006 SCO2A0A1W2PP80 73 aa5.74□□□□□ -1.49
DEPDC1B-204ENST00000509006 ATXN7O15265 892 aaPredicted RBP5.74□□□□□ -1.49
DEPDC1B-204ENST00000509006 SLC24A1O60721 1099 aa5.74□□□□□ -1.49
DEPDC1B-204ENST00000509006 BRPF1P55201 1214 aaPredicted RBP5.74□□□□□ -1.49
DEPDC1B-204ENST00000509006 NEUROD2Q15784 382 aa5.74□□□□□ -1.49
DEPDC1B-204ENST00000509006 RSPO4Q2I0M5 234 aaPredicted RBP5.74□□□□□ -1.49
DEPDC1B-204ENST00000509006 TSGA10IPQ3SY00 556 aa5.74□□□□□ -1.49
DEPDC1B-204ENST00000509006 MTMR14Q8NCE2 650 aa5.74□□□□□ -1.49
DEPDC1B-204ENST00000509006 IL27Q8NEV9 243 aa5.74□□□□□ -1.49
DEPDC1B-204ENST00000509006 PLVAPQ9BX97 442 aa5.74□□□□□ -1.49
DEPDC1B-204ENST00000509006 CEP126Q9P2H0 1117 aa5.74□□□□□ -1.49
DEPDC1B-204ENST00000509006 SOCS7O14512 581 aa5.73□□□□□ -1.49
DEPDC1B-204ENST00000509006 MAPTP10636 758 aaKnown RBP5.73□□□□□ -1.49
DEPDC1B-204ENST00000509006 NDUFB9Q9Y6M9 179 aa5.73□□□□□ -1.49
DEPDC1B-204ENST00000509006 KHNYNO15037 678 aaKnown RBP5.72□□□□□ -1.49
DEPDC1B-204ENST00000509006 SPATA31C1P0DKV0 1188 aa5.72□□□□□ -1.49
DEPDC1B-204ENST00000509006 PCBP4P57723 403 aaKnown RBP5.72□□□□□ -1.49
DEPDC1B-204ENST00000509006 TNP2Q05952 138 aa5.72□□□□□ -1.49
DEPDC1B-204ENST00000509006 NLRP8Q86W28 1048 aa5.72□□□□□ -1.49
DEPDC1B-204ENST00000509006 AIDAQ96BJ3 306 aa5.72□□□□□ -1.49
DEPDC1B-204ENST00000509006 TPSG1Q9NRR2 321 aa5.72□□□□□ -1.49
DEPDC1B-204ENST00000509006 DOLKQ9UPQ8 538 aa5.72□□□□□ -1.49
DEPDC1B-204ENST00000509006 A0A1W2PNR3 127 aa5.71□□□□□ -1.5
DEPDC1B-204ENST00000509006 SCNN1DP51172 638 aa5.71□□□□□ -1.5
DEPDC1B-204ENST00000509006 OXLD1Q5BKU9 147 aa5.71□□□□□ -1.5
DEPDC1B-204ENST00000509006 NKAPLQ5M9Q1 402 aa5.71□□□□□ -1.5
DEPDC1B-204ENST00000509006 FAM182BQ5T319 152 aa5.71□□□□□ -1.5
DEPDC1B-204ENST00000509006 USP4Q13107 963 aa5.7□□□□□ -1.5
DEPDC1B-204ENST00000509006 ZNF468Q5VIY5 522 aaPredicted RBP5.7□□□□□ -1.5
DEPDC1B-204ENST00000509006 BANK1Q8NDB2 785 aa5.7□□□□□ -1.5
DEPDC1B-204ENST00000509006 C1orf216Q8TAB5 229 aa5.7□□□□□ -1.5
DEPDC1B-204ENST00000509006 KRTAP4-12Q9BQ66 201 aa5.7□□□□□ -1.5
DEPDC1B-204ENST00000509006 NIFKQ9BYG3 293 aaKnown RBP5.7□□□□□ -1.5
DEPDC1B-204ENST00000509006 AVENQ9NQS1 362 aaPredicted RBP5.7□□□□□ -1.5
DEPDC1B-204ENST00000509006 STRN4Q9NRL3 753 aa5.7□□□□□ -1.5
DEPDC1B-204ENST00000509006 DYRK3O43781 588 aa5.69□□□□□ -1.5
DEPDC1B-204ENST00000509006 GDF10P55107 478 aa5.69□□□□□ -1.5
DEPDC1B-204ENST00000509006 ARSJQ5FYB0 599 aaPredicted RBP5.69□□□□□ -1.5
DEPDC1B-204ENST00000509006 PHTF2Q8N3S3 785 aa5.69□□□□□ -1.5
DEPDC1B-204ENST00000509006 PRR12Q9ULL5 1215 aa5.69□□□□□ -1.5
DEPDC1B-204ENST00000509006 FAM229AH3BQW9 127 aa5.68□□□□□ -1.5
DEPDC1B-204ENST00000509006 INHAP05111 366 aa5.68□□□□□ -1.5
DEPDC1B-204ENST00000509006 FAM157BP0CG42 384 aa5.68□□□□□ -1.5
DEPDC1B-204ENST00000509006 ZNF295-AS1Q8N0V1 137 aa5.68□□□□□ -1.5
DEPDC1B-204ENST00000509006 SNRKQ9NRH2 765 aa5.68□□□□□ -1.5
DEPDC1B-204ENST00000509006 USP3Q9Y6I4 520 aa5.68□□□□□ -1.5
DEPDC1B-204ENST00000509006 ELOA3CA0A087WX78 387 aaPredicted RBP5.67□□□□□ -1.5
DEPDC1B-204ENST00000509006 ELOA3DA6NLF2 546 aaPredicted RBP5.67□□□□□ -1.5
DEPDC1B-204ENST00000509006 NBPF1Q3BBV0 1214 aa5.67□□□□□ -1.5
DEPDC1B-204ENST00000509006 ELOA3BQ3SY89 546 aa5.67□□□□□ -1.5
DEPDC1B-204ENST00000509006 ARTNQ5T4W7 220 aa5.67□□□□□ -1.5
DEPDC1B-204ENST00000509006 ELOA3Q8NG57 546 aa5.67□□□□□ -1.5
DEPDC1B-204ENST00000509006 ZIC5Q96T25 663 aa5.67□□□□□ -1.5
DEPDC1B-204ENST00000509006 ZFP64Q9NPA5 681 aa5.67□□□□□ -1.5
DEPDC1B-204ENST00000509006 TATP17735 454 aaPredicted RBP5.66□□□□□ -1.5
DEPDC1B-204ENST00000509006 SMTNP53814 917 aa5.66□□□□□ -1.5
DEPDC1B-204ENST00000509006 SLFNL1Q499Z3 407 aa5.66□□□□□ -1.5
DEPDC1B-204ENST00000509006 PRRT3Q5FWE3 981 aa5.66□□□□□ -1.5
DEPDC1B-204ENST00000509006 MDFIQ99750 246 aa5.66□□□□□ -1.5
DEPDC1B-204ENST00000509006 KRTAP9-9Q9BYP9 154 aa5.66□□□□□ -1.5
DEPDC1B-204ENST00000509006 KRTAP9-4Q9BYQ2 154 aa5.66□□□□□ -1.5
DEPDC1B-204ENST00000509006 SERTAD1Q9UHV2 236 aa5.66□□□□□ -1.5
DEPDC1B-204ENST00000509006 IQSEC3Q9UPP2 1182 aaPredicted RBP5.66□□□□□ -1.5
DEPDC1B-204ENST00000509006 KRTAP4-8A0A0G2JLE6 195 aa5.65□□□□□ -1.5
DEPDC1B-204ENST00000509006 SPDYE3A6NKU9 549 aa5.65□□□□□ -1.5
DEPDC1B-204ENST00000509006 EFSO43281 561 aa5.65□□□□□ -1.5
DEPDC1B-204ENST00000509006 APBA3O96018 575 aa5.65□□□□□ -1.5
DEPDC1B-204ENST00000509006 COL9A3Q14050 684 aaPredicted RBP5.65□□□□□ -1.5
DEPDC1B-204ENST00000509006 PRSS36Q5K4E3 855 aa5.65□□□□□ -1.5
DEPDC1B-204ENST00000509006 SYT9Q86SS6 491 aa5.65□□□□□ -1.5
DEPDC1B-204ENST00000509006 ZDHHC3Q9NYG2 299 aa5.65□□□□□ -1.5
DEPDC1B-204ENST00000509006 MARK1Q9P0L2 795 aa5.65□□□□□ -1.5
DEPDC1B-204ENST00000509006 TBC1D2BQ9UPU7 963 aa5.65□□□□□ -1.5
DEPDC1B-204ENST00000509006 GJA3Q9Y6H8 435 aa5.65□□□□□ -1.5
DEPDC1B-204ENST00000509006 M0R082 166 aa5.64□□□□□ -1.51
DEPDC1B-204ENST00000509006 EIF4G2P78344 907 aaKnown RBP eCLIP5.64□□□□□ -1.51
DEPDC1B-204ENST00000509006 C8orf86Q6ZUL3 223 aa5.64□□□□□ -1.51
DEPDC1B-204ENST00000509006 ZNF417Q8TAU3 575 aa5.64□□□□□ -1.51
DEPDC1B-204ENST00000509006 ZNF587Q96SQ5 575 aaPredicted RBP5.64□□□□□ -1.51
DEPDC1B-204ENST00000509006 CABP1Q9NZU7 370 aa5.64□□□□□ -1.51
DEPDC1B-204ENST00000509006 CHIC2Q9UKJ5 165 aa5.64□□□□□ -1.51
DEPDC1B-204ENST00000509006 PARP3Q9Y6F1 533 aa5.64□□□□□ -1.51
DEPDC1B-204ENST00000509006 TMEM229AB2RXF0 380 aa5.63□□□□□ -1.51
DEPDC1B-204ENST00000509006 APBB1O00213 710 aa5.63□□□□□ -1.51
DEPDC1B-204ENST00000509006 ALAS2P22557 587 aa5.63□□□□□ -1.51
DEPDC1B-204ENST00000509006 TXLNAP40222 546 aa5.63□□□□□ -1.51
DEPDC1B-204ENST00000509006 GRIK4Q16099 956 aa5.63□□□□□ -1.51
DEPDC1B-204ENST00000509006 SAMD5Q5TGI4 173 aa5.63□□□□□ -1.51
DEPDC1B-204ENST00000509006 BICDL1Q6ZP65 573 aa5.63□□□□□ -1.51
DEPDC1B-204ENST00000509006 NBPF11Q86T75 865 aa5.63□□□□□ -1.51
DEPDC1B-204ENST00000509006 SIRT1Q96EB6 747 aa5.63□□□□□ -1.51
DEPDC1B-204ENST00000509006 A6NJY4 79 aa5.62□□□□□ -1.51
DEPDC1B-204ENST00000509006 ALBP02768 609 aa5.62□□□□□ -1.51
DEPDC1B-204ENST00000509006 IRF5Q13568 498 aa5.62□□□□□ -1.51
DEPDC1B-204ENST00000509006 LAMC2Q13753 1193 aa5.62□□□□□ -1.51
DEPDC1B-204ENST00000509006 MTFR1Q15390 333 aa5.62□□□□□ -1.51
DEPDC1B-204ENST00000509006 STARD13Q9Y3M8 1113 aa5.62□□□□□ -1.51
DEPDC1B-204ENST00000509006 CDK2AP1O14519 115 aa5.61□□□□□ -1.51
DEPDC1B-204ENST00000509006 SLC4A9Q96Q91 983 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms