RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 ZBTB1Q9Y2K1 713 aa19.72■□□□□ 0.75
UBE2D3-228ENST00000508974 USP42Q9H9J4 1324 aaKnown RBP19.72■□□□□ 0.75
UBE2D3-228ENST00000508974 KIAA1551Q9HCM1 1747 aa19.71■□□□□ 0.75
UBE2D3-228ENST00000508974 SOS1Q07889 1333 aaPredicted RBP19.71■□□□□ 0.75
UBE2D3-228ENST00000508974 BTBD11A6QL63 1104 aa19.7■□□□□ 0.74
UBE2D3-228ENST00000508974 KCNQ3O43525 872 aa19.7■□□□□ 0.74
UBE2D3-228ENST00000508974 CANXP27824 592 aaKnown RBP19.7■□□□□ 0.74
UBE2D3-228ENST00000508974 FKBP8Q14318 412 aa19.7■□□□□ 0.74
UBE2D3-228ENST00000508974 PARP3Q9Y6F1 533 aa19.7■□□□□ 0.74
UBE2D3-228ENST00000508974 COL15A1P39059 1388 aa19.7■□□□□ 0.74
UBE2D3-228ENST00000508974 USPL1Q5W0Q7 1092 aa19.69■□□□□ 0.74
UBE2D3-228ENST00000508974 VSIG10Q8N0Z9 540 aa19.69■□□□□ 0.74
UBE2D3-228ENST00000508974 HEG1Q9ULI3 1381 aa19.69■□□□□ 0.74
UBE2D3-228ENST00000508974 ZPR1O75312 459 aa19.68■□□□□ 0.74
UBE2D3-228ENST00000508974 NEFMP07197 916 aa19.68■□□□□ 0.74
UBE2D3-228ENST00000508974 ZNF330Q9Y3S2 320 aaPredicted RBP19.68■□□□□ 0.74
UBE2D3-228ENST00000508974 RALBP1Q15311 655 aa19.67■□□□□ 0.74
UBE2D3-228ENST00000508974 FMNL2Q96PY5 1086 aa19.67■□□□□ 0.74
UBE2D3-228ENST00000508974 C10orf71Q711Q0 1435 aa19.67■□□□□ 0.74
UBE2D3-228ENST00000508974 PXDNLA1KZ92 1463 aa19.67■□□□□ 0.74
UBE2D3-228ENST00000508974 STARD3NLO95772 234 aa19.66■□□□□ 0.74
UBE2D3-228ENST00000508974 AFDNP55196 1824 aaKnown RBP19.65■□□□□ 0.74
UBE2D3-228ENST00000508974 GRIN3BO60391 1043 aa19.65■□□□□ 0.74
UBE2D3-228ENST00000508974 DDR1Q08345 913 aa19.65■□□□□ 0.74
UBE2D3-228ENST00000508974 A0A0G2JLW4 131 aa19.64■□□□□ 0.73
UBE2D3-228ENST00000508974 ZNF784Q8NCA9 323 aaPredicted RBP19.64■□□□□ 0.73
UBE2D3-228ENST00000508974 PLEKHF1Q96S99 279 aa19.64■□□□□ 0.73
UBE2D3-228ENST00000508974 MAPK8IP3Q9UPT6 1336 aa19.64■□□□□ 0.73
UBE2D3-228ENST00000508974 SCN7AQ01118 1682 aa19.63■□□□□ 0.73
UBE2D3-228ENST00000508974 PRAMEF22A3QJZ6 481 aa19.63■□□□□ 0.73
UBE2D3-228ENST00000508974 MIS18AQ9NYP9 233 aa19.63■□□□□ 0.73
UBE2D3-228ENST00000508974 NARFQ9UHQ1 456 aa19.63■□□□□ 0.73
UBE2D3-228ENST00000508974 BRCA1P38398 1863 aaKnown RBP19.62■□□□□ 0.73
UBE2D3-228ENST00000508974 MYBBP1AQ9BQG0 1328 aaKnown RBP19.62■□□□□ 0.73
UBE2D3-228ENST00000508974 A1BGP04217 495 aa19.62■□□□□ 0.73
UBE2D3-228ENST00000508974 PIP4K2AP48426 406 aaPredicted RBP19.62■□□□□ 0.73
UBE2D3-228ENST00000508974 THUMPD2Q9BTF0 503 aaKnown RBP19.62■□□□□ 0.73
UBE2D3-228ENST00000508974 TEX13AQ9BXU3 409 aaPredicted RBP19.62■□□□□ 0.73
UBE2D3-228ENST00000508974 KDM3BQ7LBC6 1761 aa19.62■□□□□ 0.73
UBE2D3-228ENST00000508974 POLRMTO00411 1230 aaKnown RBP19.61■□□□□ 0.73
UBE2D3-228ENST00000508974 HTATSF1O43719 755 aaKnown RBP19.61■□□□□ 0.73
UBE2D3-228ENST00000508974 NFE2L2Q16236 605 aa19.61■□□□□ 0.73
UBE2D3-228ENST00000508974 DPEP1P16444 411 aa19.6■□□□□ 0.73
UBE2D3-228ENST00000508974 EIF5P55010 431 aaKnown RBP19.6■□□□□ 0.73
UBE2D3-228ENST00000508974 BICDL1Q6ZP65 573 aa19.6■□□□□ 0.73
UBE2D3-228ENST00000508974 BCL2L12Q9HB09 334 aa19.6■□□□□ 0.73
UBE2D3-228ENST00000508974 TBC1D2BQ9UPU7 963 aa19.6■□□□□ 0.73
UBE2D3-228ENST00000508974 USP16Q9Y5T5 823 aa19.6■□□□□ 0.73
UBE2D3-228ENST00000508974 LAMB4A4D0S4 1761 aa19.6■□□□□ 0.73
UBE2D3-228ENST00000508974 TM4SF1P30408 202 aa19.59■□□□□ 0.73
UBE2D3-228ENST00000508974 TGFB2P61812 414 aa19.59■□□□□ 0.73
UBE2D3-228ENST00000508974 NFIXQ14938 502 aa19.59■□□□□ 0.73
UBE2D3-228ENST00000508974 TAF7Q15545 349 aaPredicted RBP19.59■□□□□ 0.73
UBE2D3-228ENST00000508974 PNNQ9H307 717 aaKnown RBP19.59■□□□□ 0.73
UBE2D3-228ENST00000508974 BCS1LQ9Y276 419 aa19.59■□□□□ 0.73
UBE2D3-228ENST00000508974 BCORQ6W2J9 1755 aa19.59■□□□□ 0.73
UBE2D3-228ENST00000508974 NRXN2Q9P2S2 1712 aa19.58■□□□□ 0.72
UBE2D3-228ENST00000508974 A0A087WZG4 1122 aa19.57■□□□□ 0.72
UBE2D3-228ENST00000508974 NPM2Q86SE8 214 aaKnown RBP19.57■□□□□ 0.72
UBE2D3-228ENST00000508974 CCDC146Q8IYE0 955 aa19.57■□□□□ 0.72
UBE2D3-228ENST00000508974 SNRPA1P09661 255 aaKnown RBP19.56■□□□□ 0.72
UBE2D3-228ENST00000508974 CHRNA5P30532 468 aa19.56■□□□□ 0.72
UBE2D3-228ENST00000508974 IL6STP40189 918 aaPredicted RBP19.56■□□□□ 0.72
UBE2D3-228ENST00000508974 RRP7AQ9Y3A4 280 aaKnown RBP19.55■□□□□ 0.72
UBE2D3-228ENST00000508974 ARFGEF1Q9Y6D6 1849 aa19.55■□□□□ 0.72
UBE2D3-228ENST00000508974 SERPINB2P05120 415 aa19.54■□□□□ 0.72
UBE2D3-228ENST00000508974 RIPK4P57078 832 aa19.54■□□□□ 0.72
UBE2D3-228ENST00000508974 WDR43Q15061 677 aaKnown RBP eCLIP19.54■□□□□ 0.72
UBE2D3-228ENST00000508974 TBC1D9BQ66K14 1250 aa19.54■□□□□ 0.72
UBE2D3-228ENST00000508974 KCNA3P22001 575 aa19.53■□□□□ 0.72
UBE2D3-228ENST00000508974 ZEB1P37275 1124 aaPredicted RBP19.53■□□□□ 0.72
UBE2D3-228ENST00000508974 NEUROD2Q15784 382 aa19.53■□□□□ 0.72
UBE2D3-228ENST00000508974 DZIP3Q86Y13 1208 aaKnown RBP19.53■□□□□ 0.72
UBE2D3-228ENST00000508974 PRKRIP1Q9H875 184 aaPredicted RBP19.53■□□□□ 0.72
UBE2D3-228ENST00000508974 CARMIL3Q8ND23 1372 aa19.53■□□□□ 0.72
UBE2D3-228ENST00000508974 DLEC1Q9Y238 1755 aa19.52■□□□□ 0.72
UBE2D3-228ENST00000508974 ANKRD31Q8N7Z5 1873 aa19.52■□□□□ 0.72
UBE2D3-228ENST00000508974 CCDC24Q8N4L8 307 aa19.52■□□□□ 0.72
UBE2D3-228ENST00000508974 ATP10DQ9P241 1426 aa19.51■□□□□ 0.71
UBE2D3-228ENST00000508974 ARHGAP27Q6ZUM4 889 aa19.51■□□□□ 0.71
UBE2D3-228ENST00000508974 PNISRQ8TF01 805 aaKnown RBP19.51■□□□□ 0.71
UBE2D3-228ENST00000508974 ZNF526Q8TF50 670 aaPredicted RBP19.51■□□□□ 0.71
UBE2D3-228ENST00000508974 PIM2Q9P1W9 311 aa19.51■□□□□ 0.71
UBE2D3-228ENST00000508974 NBPF26B4DH59 902 aa19.5■□□□□ 0.71
UBE2D3-228ENST00000508974 CAMTA2O94983 1202 aa19.5■□□□□ 0.71
UBE2D3-228ENST00000508974 TMPOP42166 694 aaKnown RBP19.5■□□□□ 0.71
UBE2D3-228ENST00000508974 NBPF10Q6P3W6 841 aaKnown RBP19.5■□□□□ 0.71
UBE2D3-228ENST00000508974 NBPF15Q8N660 670 aa19.5■□□□□ 0.71
UBE2D3-228ENST00000508974 EIF4A1P60842 406 aaKnown RBP19.49■□□□□ 0.71
UBE2D3-228ENST00000508974 DALRD3Q5D0E6 543 aaKnown RBP19.49■□□□□ 0.71
UBE2D3-228ENST00000508974 NGEFQ8N5V2 710 aa19.49■□□□□ 0.71
UBE2D3-228ENST00000508974 TSPYL4Q9UJ04 414 aa19.49■□□□□ 0.71
UBE2D3-228ENST00000508974 CACNA1SQ13698 1873 aa19.49■□□□□ 0.71
UBE2D3-228ENST00000508974 COL11A2P13942 1736 aaPredicted RBP19.48■□□□□ 0.71
UBE2D3-228ENST00000508974 NPHP1O15259 732 aa19.48■□□□□ 0.71
UBE2D3-228ENST00000508974 ADAMTS8Q9UP79 889 aa19.48■□□□□ 0.71
UBE2D3-228ENST00000508974 ADCY9O60503 1353 aa19.47■□□□□ 0.71
UBE2D3-228ENST00000508974 GIGYF1O75420 1035 aaPredicted RBP19.47■□□□□ 0.71
UBE2D3-228ENST00000508974 SETDB2Q96T68 719 aa19.47■□□□□ 0.71
UBE2D3-228ENST00000508974 LMOD3Q0VAK6 560 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms