RNA–Protein interactions for RNA: ENST00000508708.1

CSNK1G3-204, Transcript of casein kinase 1 gamma 3, humanhuman

TSL 2

Gene CSNK1G3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-204ENST00000508708 DCAF8L1A6NGE4 600 aa31.02■■■□□ 2.56
CSNK1G3-204ENST00000508708 KDM3BQ7LBC6 1761 aa31.02■■■□□ 2.56
CSNK1G3-204ENST00000508708 ZNF316A6NFI3 1004 aaPredicted RBP31.01■■■□□ 2.55
CSNK1G3-204ENST00000508708 STARD3NLO95772 234 aa31.01■■■□□ 2.55
CSNK1G3-204ENST00000508708 KIF13BQ9NQT8 1826 aa31■■■□□ 2.55
CSNK1G3-204ENST00000508708 TAF7Q15545 349 aaPredicted RBP30.99■■■□□ 2.55
CSNK1G3-204ENST00000508708 TEX13AQ9BXU3 409 aaPredicted RBP30.99■■■□□ 2.55
CSNK1G3-204ENST00000508708 THUMPD2Q9BTF0 503 aaKnown RBP30.98■■■□□ 2.55
CSNK1G3-204ENST00000508708 C10orf71Q711Q0 1435 aa30.98■■■□□ 2.55
CSNK1G3-204ENST00000508708 EIF5P55010 431 aaKnown RBP30.97■■■□□ 2.55
CSNK1G3-204ENST00000508708 FKBP8Q14318 412 aa30.97■■■□□ 2.55
CSNK1G3-204ENST00000508708 KIAA1551Q9HCM1 1747 aa30.96■■■□□ 2.55
CSNK1G3-204ENST00000508708 CANXP27824 592 aaKnown RBP30.95■■■□□ 2.55
CSNK1G3-204ENST00000508708 NARFQ9UHQ1 456 aa30.95■■■□□ 2.55
CSNK1G3-204ENST00000508708 PRAMEF22A3QJZ6 481 aa30.94■■■□□ 2.54
CSNK1G3-204ENST00000508708 TMPOP42166 694 aaKnown RBP30.94■■■□□ 2.54
CSNK1G3-204ENST00000508708 WDR43Q15061 677 aaKnown RBP eCLIP30.94■■■□□ 2.54
CSNK1G3-204ENST00000508708 SCN7AQ01118 1682 aa30.93■■■□□ 2.54
CSNK1G3-204ENST00000508708 DDR1Q08345 913 aa30.93■■■□□ 2.54
CSNK1G3-204ENST00000508708 USPL1Q5W0Q7 1092 aa30.93■■■□□ 2.54
CSNK1G3-204ENST00000508708 CCDC146Q8IYE0 955 aa30.93■■■□□ 2.54
CSNK1G3-204ENST00000508708 MIS18AQ9NYP9 233 aa30.93■■■□□ 2.54
CSNK1G3-204ENST00000508708 ADAMTS8Q9UP79 889 aa30.93■■■□□ 2.54
CSNK1G3-204ENST00000508708 LAMB4A4D0S4 1761 aa30.92■■■□□ 2.54
CSNK1G3-204ENST00000508708 BCL2L12Q9HB09 334 aa30.92■■■□□ 2.54
CSNK1G3-204ENST00000508708 USP16Q9Y5T5 823 aa30.92■■■□□ 2.54
CSNK1G3-204ENST00000508708 PXDNLA1KZ92 1463 aa30.91■■■□□ 2.54
CSNK1G3-204ENST00000508708 ZPR1O75312 459 aa30.91■■■□□ 2.54
CSNK1G3-204ENST00000508708 SNRPA1P09661 255 aaKnown RBP30.91■■■□□ 2.54
CSNK1G3-204ENST00000508708 RIPK4P57078 832 aa30.91■■■□□ 2.54
CSNK1G3-204ENST00000508708 A1BGP04217 495 aa30.9■■■□□ 2.54
CSNK1G3-204ENST00000508708 YBX3P16989 372 aaKnown RBP eCLIP30.9■■■□□ 2.54
CSNK1G3-204ENST00000508708 IL6STP40189 918 aaPredicted RBP30.9■■■□□ 2.54
CSNK1G3-204ENST00000508708 GPR162Q16538 588 aa30.9■■■□□ 2.54
CSNK1G3-204ENST00000508708 PNISRQ8TF01 805 aaKnown RBP30.9■■■□□ 2.54
CSNK1G3-204ENST00000508708 TM4SF1P30408 202 aa30.89■■■□□ 2.54
CSNK1G3-204ENST00000508708 RUNDC1Q96C34 613 aa30.89■■■□□ 2.54
CSNK1G3-204ENST00000508708 PARP3Q9Y6F1 533 aa30.89■■■□□ 2.54
CSNK1G3-204ENST00000508708 POLRMTO00411 1230 aaKnown RBP30.87■■■□□ 2.53
CSNK1G3-204ENST00000508708 RRP7AQ9Y3A4 280 aaKnown RBP30.87■■■□□ 2.53
CSNK1G3-204ENST00000508708 NRXN2Q9P2S2 1712 aa30.87■■■□□ 2.53
CSNK1G3-204ENST00000508708 PELP1Q8IZL8 1130 aaKnown RBP30.86■■■□□ 2.53
CSNK1G3-204ENST00000508708 BCORQ6W2J9 1755 aa30.86■■■□□ 2.53
CSNK1G3-204ENST00000508708 CHD4Q14839 1912 aa30.86■■■□□ 2.53
CSNK1G3-204ENST00000508708 A0A087WZG4 1122 aa30.85■■■□□ 2.53
CSNK1G3-204ENST00000508708 YY1P25490 414 aa30.85■■■□□ 2.53
CSNK1G3-204ENST00000508708 EIF4A1P60842 406 aaKnown RBP30.85■■■□□ 2.53
CSNK1G3-204ENST00000508708 LMOD3Q0VAK6 560 aa30.85■■■□□ 2.53
CSNK1G3-204ENST00000508708 NFIXQ14938 502 aa30.84■■■□□ 2.53
CSNK1G3-204ENST00000508708 AFDNP55196 1824 aaKnown RBP30.83■■■□□ 2.53
CSNK1G3-204ENST00000508708 PIP4K2AP48426 406 aaPredicted RBP30.83■■■□□ 2.53
CSNK1G3-204ENST00000508708 CCDC184Q52MB2 194 aa30.83■■■□□ 2.53
CSNK1G3-204ENST00000508708 N4BP2Q86UW6 1770 aaPredicted RBP30.83■■■□□ 2.53
CSNK1G3-204ENST00000508708 GIGYF1O75420 1035 aaPredicted RBP30.82■■■□□ 2.52
CSNK1G3-204ENST00000508708 TRIM35Q9UPQ4 493 aa30.82■■■□□ 2.52
CSNK1G3-204ENST00000508708 NBPF26B4DH59 902 aa30.81■■■□□ 2.52
CSNK1G3-204ENST00000508708 TGFB2P61812 414 aa30.81■■■□□ 2.52
CSNK1G3-204ENST00000508708 NBPF10Q6P3W6 841 aaKnown RBP30.81■■■□□ 2.52
CSNK1G3-204ENST00000508708 NBPF15Q8N660 670 aa30.81■■■□□ 2.52
CSNK1G3-204ENST00000508708 ZNF330Q9Y3S2 320 aaPredicted RBP30.81■■■□□ 2.52
CSNK1G3-204ENST00000508708 BRCA1P38398 1863 aaKnown RBP30.8■■■□□ 2.52
CSNK1G3-204ENST00000508708 TBC1D2BQ9UPU7 963 aa30.8■■■□□ 2.52
CSNK1G3-204ENST00000508708 CAMTA2O94983 1202 aa30.79■■■□□ 2.52
CSNK1G3-204ENST00000508708 NEUROD2Q15784 382 aa30.79■■■□□ 2.52
CSNK1G3-204ENST00000508708 BABAM1Q9NWV8 329 aa30.79■■■□□ 2.52
CSNK1G3-204ENST00000508708 TSPYL4Q9UJ04 414 aa30.79■■■□□ 2.52
CSNK1G3-204ENST00000508708 GRIN3BO60391 1043 aa30.78■■■□□ 2.52
CSNK1G3-204ENST00000508708 WWC3Q9ULE0 1092 aa30.76■■■□□ 2.51
CSNK1G3-204ENST00000508708 DPEP1P16444 411 aa30.75■■■□□ 2.51
CSNK1G3-204ENST00000508708 TBC1D9BQ66K14 1250 aa30.75■■■□□ 2.51
CSNK1G3-204ENST00000508708 DZIP3Q86Y13 1208 aaKnown RBP30.75■■■□□ 2.51
CSNK1G3-204ENST00000508708 A0A0G2JLW4 131 aa30.74■■■□□ 2.51
CSNK1G3-204ENST00000508708 SERPINB2P05120 415 aa30.73■■■□□ 2.51
CSNK1G3-204ENST00000508708 KCNA3P22001 575 aa30.73■■■□□ 2.51
CSNK1G3-204ENST00000508708 CARMIL3Q8ND23 1372 aa30.72■■■□□ 2.51
CSNK1G3-204ENST00000508708 ANP32CO43423 234 aa30.72■■■□□ 2.51
CSNK1G3-204ENST00000508708 NPM2Q86SE8 214 aaKnown RBP30.72■■■□□ 2.51
CSNK1G3-204ENST00000508708 APAF1O14727 1248 aa30.71■■■□□ 2.51
CSNK1G3-204ENST00000508708 CHL1O00533 1208 aa30.7■■■□□ 2.51
CSNK1G3-204ENST00000508708 BICDL1Q6ZP65 573 aa30.7■■■□□ 2.51
CSNK1G3-204ENST00000508708 RGL2O15211 777 aa30.68■■■□□ 2.5
CSNK1G3-204ENST00000508708 CLEC4GQ6UXB4 293 aa30.67■■■□□ 2.5
CSNK1G3-204ENST00000508708 ANKRD31Q8N7Z5 1873 aa30.67■■■□□ 2.5
CSNK1G3-204ENST00000508708 ERBB4Q15303 1308 aa30.67■■■□□ 2.5
CSNK1G3-204ENST00000508708 DLEC1Q9Y238 1755 aa30.66■■■□□ 2.5
CSNK1G3-204ENST00000508708 CHRNA5P30532 468 aa30.66■■■□□ 2.5
CSNK1G3-204ENST00000508708 ARFGEF1Q9Y6D6 1849 aa30.65■■■□□ 2.5
CSNK1G3-204ENST00000508708 LRP10Q7Z4F1 713 aa30.64■■■□□ 2.5
CSNK1G3-204ENST00000508708 MRS2Q9HD23 443 aa30.64■■■□□ 2.5
CSNK1G3-204ENST00000508708 BCS1LQ9Y276 419 aa30.64■■■□□ 2.5
CSNK1G3-204ENST00000508708 PRR5LQ6MZQ0 368 aa30.63■■■□□ 2.49
CSNK1G3-204ENST00000508708 ZNF652Q9Y2D9 606 aa30.63■■■□□ 2.49
CSNK1G3-204ENST00000508708 PDIA6Q15084 440 aa30.62■■■□□ 2.49
CSNK1G3-204ENST00000508708 KRT24Q2M2I5 525 aa30.62■■■□□ 2.49
CSNK1G3-204ENST00000508708 ZNF784Q8NCA9 323 aaPredicted RBP30.62■■■□□ 2.49
CSNK1G3-204ENST00000508708 CFAP44Q96MT7 982 aa30.62■■■□□ 2.49
CSNK1G3-204ENST00000508708 SETDB2Q96T68 719 aa30.62■■■□□ 2.49
CSNK1G3-204ENST00000508708 ZNF853P0CG23 659 aa30.61■■■□□ 2.49
CSNK1G3-204ENST00000508708 HLFQ16534 295 aa30.61■■■□□ 2.49
CSNK1G3-204ENST00000508708 PIM2Q9P1W9 311 aa30.61■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms