RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 LZTS3O60299 673 aaPredicted RBP8.6□□□□□ -1.03
PDLIM5-211ENST00000508531 GPAT2Q6NUI2 795 aa8.6□□□□□ -1.03
PDLIM5-211ENST00000508531 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.6□□□□□ -1.03
PDLIM5-211ENST00000508531 GALNT6Q8NCL4 622 aa8.6□□□□□ -1.03
PDLIM5-211ENST00000508531 ADAMTS19Q8TE59 1207 aa8.6□□□□□ -1.03
PDLIM5-211ENST00000508531 PARP3Q9Y6F1 533 aa8.6□□□□□ -1.03
PDLIM5-211ENST00000508531 A0A1W2PNR3 127 aa8.59□□□□□ -1.03
PDLIM5-211ENST00000508531 BACH1O14867 736 aa8.59□□□□□ -1.03
PDLIM5-211ENST00000508531 NBPF1Q3BBV0 1214 aa8.59□□□□□ -1.03
PDLIM5-211ENST00000508531 ARSJQ5FYB0 599 aaPredicted RBP8.59□□□□□ -1.03
PDLIM5-211ENST00000508531 FIGNL1Q6PIW4 674 aa8.59□□□□□ -1.03
PDLIM5-211ENST00000508531 NLRP8Q86W28 1048 aa8.59□□□□□ -1.03
PDLIM5-211ENST00000508531 ZNF358Q9NW07 568 aa8.59□□□□□ -1.03
PDLIM5-211ENST00000508531 GDF2Q9UK05 429 aaPredicted RBP8.59□□□□□ -1.03
PDLIM5-211ENST00000508531 ATXN7O15265 892 aaPredicted RBP8.58□□□□□ -1.04
PDLIM5-211ENST00000508531 SNRPNP63162 240 aaKnown RBP8.58□□□□□ -1.04
PDLIM5-211ENST00000508531 EDARADDQ8WWZ3 215 aa8.58□□□□□ -1.04
PDLIM5-211ENST00000508531 PCDHGC4Q9Y5F7 938 aa8.58□□□□□ -1.04
PDLIM5-211ENST00000508531 DCDC2BA2VCK2 349 aa8.57□□□□□ -1.04
PDLIM5-211ENST00000508531 TATP17735 454 aaPredicted RBP8.57□□□□□ -1.04
PDLIM5-211ENST00000508531 GOLGA6L1Q8N7Z2 621 aa8.57□□□□□ -1.04
PDLIM5-211ENST00000508531 GGA1Q9UJY5 639 aa8.57□□□□□ -1.04
PDLIM5-211ENST00000508531 HDGFL1Q5TGJ6 251 aa8.56□□□□□ -1.04
PDLIM5-211ENST00000508531 DCAF5Q96JK2 942 aa8.56□□□□□ -1.04
PDLIM5-211ENST00000508531 ZIC5Q96T25 663 aa8.56□□□□□ -1.04
PDLIM5-211ENST00000508531 ZDHHC3Q9NYG2 299 aa8.56□□□□□ -1.04
PDLIM5-211ENST00000508531 SCHIP1Q9P0W5 487 aaPredicted RBP8.56□□□□□ -1.04
PDLIM5-211ENST00000508531 MAPTP10636 758 aaKnown RBP8.55□□□□□ -1.04
PDLIM5-211ENST00000508531 TXLNAP40222 546 aa8.55□□□□□ -1.04
PDLIM5-211ENST00000508531 TBCELQ5QJ74 424 aa8.55□□□□□ -1.04
PDLIM5-211ENST00000508531 ZDHHC1Q8WTX9 485 aa8.55□□□□□ -1.04
PDLIM5-211ENST00000508531 UCN2Q96RP3 112 aa8.55□□□□□ -1.04
PDLIM5-211ENST00000508531 RRAGCQ9HB90 399 aa8.55□□□□□ -1.04
PDLIM5-211ENST00000508531 HCN2Q9UL51 889 aa8.55□□□□□ -1.04
PDLIM5-211ENST00000508531 KIAA1024Q9UPX6 916 aa8.55□□□□□ -1.04
PDLIM5-211ENST00000508531 GJA3Q9Y6H8 435 aa8.55□□□□□ -1.04
PDLIM5-211ENST00000508531 USP17L3A6NCW0 530 aa8.54□□□□□ -1.04
PDLIM5-211ENST00000508531 USP17L4A6NCW7 530 aa8.54□□□□□ -1.04
PDLIM5-211ENST00000508531 KHNYNO15037 678 aaKnown RBP8.54□□□□□ -1.04
PDLIM5-211ENST00000508531 CD33P20138 364 aa8.54□□□□□ -1.04
PDLIM5-211ENST00000508531 AMPD1P23109 780 aa8.54□□□□□ -1.04
PDLIM5-211ENST00000508531 FOXK2Q01167 660 aa8.54□□□□□ -1.04
PDLIM5-211ENST00000508531 TNP2Q05952 138 aa8.54□□□□□ -1.04
PDLIM5-211ENST00000508531 SUZ12Q15022 739 aaKnown RBP8.54□□□□□ -1.04
PDLIM5-211ENST00000508531 USP17L2Q6R6M4 530 aa8.54□□□□□ -1.04
PDLIM5-211ENST00000508531 BICDL1Q6ZP65 573 aa8.54□□□□□ -1.04
PDLIM5-211ENST00000508531 SLCO4C1Q6ZQN7 724 aa8.54□□□□□ -1.04
PDLIM5-211ENST00000508531 USP17L1Q7RTZ2 530 aa8.54□□□□□ -1.04
PDLIM5-211ENST00000508531 TRIM50Q86XT4 487 aa8.54□□□□□ -1.04
PDLIM5-211ENST00000508531 TNS4Q8IZW8 715 aa8.54□□□□□ -1.04
PDLIM5-211ENST00000508531 NEURL1BA8MQ27 555 aa8.53□□□□□ -1.04
PDLIM5-211ENST00000508531 IGHA1P01876 353 aa8.53□□□□□ -1.04
PDLIM5-211ENST00000508531 ARAFP10398 606 aa8.53□□□□□ -1.04
PDLIM5-211ENST00000508531 EPHA4P54764 986 aa8.53□□□□□ -1.04
PDLIM5-211ENST00000508531 PLA2G4EQ3MJ16 856 aa8.53□□□□□ -1.04
PDLIM5-211ENST00000508531 SLC9A9Q8IVB4 645 aa8.53□□□□□ -1.04
PDLIM5-211ENST00000508531 PLEKHM2Q8IWE5 1019 aa8.53□□□□□ -1.04
PDLIM5-211ENST00000508531 TPCN2Q8NHX9 752 aa8.53□□□□□ -1.04
PDLIM5-211ENST00000508531 L3MBTL2Q969R5 705 aa8.53□□□□□ -1.04
PDLIM5-211ENST00000508531 CLUAP1Q96AJ1 413 aa8.53□□□□□ -1.04
PDLIM5-211ENST00000508531 MKL2Q9ULH7 1088 aa8.53□□□□□ -1.04
PDLIM5-211ENST00000508531 ZBTB7BO15156 539 aaPredicted RBP8.52□□□□□ -1.05
PDLIM5-211ENST00000508531 ATP9BO43861 1147 aa8.52□□□□□ -1.05
PDLIM5-211ENST00000508531 NOS2P35228 1153 aa8.52□□□□□ -1.05
PDLIM5-211ENST00000508531 CLDN10P78369 228 aa8.52□□□□□ -1.05
PDLIM5-211ENST00000508531 TEAD4Q15561 434 aa8.52□□□□□ -1.05
PDLIM5-211ENST00000508531 CCDC102BQ68D86 513 aa8.52□□□□□ -1.05
PDLIM5-211ENST00000508531 ATP1A2P50993 1020 aa8.51□□□□□ -1.05
PDLIM5-211ENST00000508531 SH3PXD2AQ5TCZ1 1133 aa8.51□□□□□ -1.05
PDLIM5-211ENST00000508531 ZNF232Q9UNY5 417 aa8.51□□□□□ -1.05
PDLIM5-211ENST00000508531 ITGB2P05107 769 aa8.5□□□□□ -1.05
PDLIM5-211ENST00000508531 FAM157BP0CG42 384 aa8.5□□□□□ -1.05
PDLIM5-211ENST00000508531 EPXP11678 715 aa8.5□□□□□ -1.05
PDLIM5-211ENST00000508531 FAM182BQ5T319 152 aa8.5□□□□□ -1.05
PDLIM5-211ENST00000508531 STRN4Q9NRL3 753 aa8.5□□□□□ -1.05
PDLIM5-211ENST00000508531 HOXB4P17483 251 aaPredicted RBP8.49□□□□□ -1.05
PDLIM5-211ENST00000508531 SAMD5Q5TGI4 173 aa8.49□□□□□ -1.05
PDLIM5-211ENST00000508531 OGFOD1Q8N543 542 aa8.49□□□□□ -1.05
PDLIM5-211ENST00000508531 BTBD6Q96KE9 485 aa8.49□□□□□ -1.05
PDLIM5-211ENST00000508531 MKRN1Q9UHC7 482 aaKnown RBP8.49□□□□□ -1.05
PDLIM5-211ENST00000508531 KLF15Q9UIH9 416 aa8.49□□□□□ -1.05
PDLIM5-211ENST00000508531 SERTM1A2A2V5 107 aa8.48□□□□□ -1.05
PDLIM5-211ENST00000508531 EML1O00423 815 aa8.48□□□□□ -1.05
PDLIM5-211ENST00000508531 ADH6P28332 368 aa8.48□□□□□ -1.05
PDLIM5-211ENST00000508531 TMEM132AQ24JP5 1023 aa8.48□□□□□ -1.05
PDLIM5-211ENST00000508531 LRRC69Q6ZNQ3 347 aa8.48□□□□□ -1.05
PDLIM5-211ENST00000508531 PROSER2Q86WR7 435 aaPredicted RBP8.48□□□□□ -1.05
PDLIM5-211ENST00000508531 TSPAN10Q9H1Z9 355 aaPredicted RBP8.48□□□□□ -1.05
PDLIM5-211ENST00000508531 MARK1Q9P0L2 795 aa8.48□□□□□ -1.05
PDLIM5-211ENST00000508531 MSTNO14793 375 aa8.47□□□□□ -1.05
PDLIM5-211ENST00000508531 COL8A1P27658 744 aa8.47□□□□□ -1.05
PDLIM5-211ENST00000508531 PCBP4P57723 403 aaKnown RBP8.47□□□□□ -1.05
PDLIM5-211ENST00000508531 LINC00114Q6XXX2 140 aa8.47□□□□□ -1.05
PDLIM5-211ENST00000508531 FCHSD1Q86WN1 690 aa8.47□□□□□ -1.05
PDLIM5-211ENST00000508531 FNBP4Q8N3X1 1017 aaPredicted RBP8.47□□□□□ -1.05
PDLIM5-211ENST00000508531 GLMNQ92990 594 aa8.47□□□□□ -1.05
PDLIM5-211ENST00000508531 ZNF594Q96JF6 807 aaPredicted RBP8.47□□□□□ -1.05
PDLIM5-211ENST00000508531 SPOCK3Q9BQ16 436 aa8.47□□□□□ -1.05
PDLIM5-211ENST00000508531 SUV39H2Q9H5I1 410 aa8.47□□□□□ -1.05
PDLIM5-211ENST00000508531 PRR12Q9ULL5 1215 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms