RNA–Protein interactions for RNA: ENST00000508514.5

SKP2-204, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 3 BASIC

Gene SKP2, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-204ENST00000508514 ZPR1O75312 459 aa24.13■■□□□ 1.45
SKP2-204ENST00000508514 FCHSD2O94868 740 aa24.13■■□□□ 1.45
SKP2-204ENST00000508514 NFIXQ14938 502 aa24.13■■□□□ 1.45
SKP2-204ENST00000508514 ARHGAP27Q6ZUM4 889 aa24.13■■□□□ 1.45
SKP2-204ENST00000508514 ZNF496Q96IT1 587 aaPredicted RBP24.13■■□□□ 1.45
SKP2-204ENST00000508514 CHRNA5P30532 468 aa24.12■■□□□ 1.45
SKP2-204ENST00000508514 RSPH6AQ9H0K4 717 aa24.12■■□□□ 1.45
SKP2-204ENST00000508514 COL15A1P39059 1388 aa24.12■■□□□ 1.45
SKP2-204ENST00000508514 CEP350Q5VT06 3117 aa24.12■■□□□ 1.45
SKP2-204ENST00000508514 KIF3CO14782 793 aa24.11■■□□□ 1.45
SKP2-204ENST00000508514 GAS2L2Q8NHY3 880 aa24.11■■□□□ 1.45
SKP2-204ENST00000508514 CANXP27824 592 aaKnown RBP24.1■■□□□ 1.45
SKP2-204ENST00000508514 PRKAR2BP31323 418 aa24.1■■□□□ 1.45
SKP2-204ENST00000508514 ZNF790Q6PG37 636 aa24.1■■□□□ 1.45
SKP2-204ENST00000508514 PIM2Q9P1W9 311 aa24.1■■□□□ 1.45
SKP2-204ENST00000508514 CEMIPQ8WUJ3 1361 aa24.1■■□□□ 1.45
SKP2-204ENST00000508514 KCNQ3O43525 872 aa24.09■■□□□ 1.45
SKP2-204ENST00000508514 PPP2R1AP30153 589 aa24.09■■□□□ 1.45
SKP2-204ENST00000508514 EIF5P55010 431 aaKnown RBP24.09■■□□□ 1.45
SKP2-204ENST00000508514 HEG1Q9ULI3 1381 aa24.07■■□□□ 1.44
SKP2-204ENST00000508514 SIPA1L3O60292 1781 aaPredicted RBP24.07■■□□□ 1.44
SKP2-204ENST00000508514 TEFQ10587 303 aa24.07■■□□□ 1.44
SKP2-204ENST00000508514 TTC5Q8N0Z6 440 aa24.07■■□□□ 1.44
SKP2-204ENST00000508514 DALRD3Q5D0E6 543 aaKnown RBP24.06■■□□□ 1.44
SKP2-204ENST00000508514 STARD3NLO95772 234 aa24.05■■□□□ 1.44
SKP2-204ENST00000508514 NRXN2Q9P2S2 1712 aa24.04■■□□□ 1.44
SKP2-204ENST00000508514 SERPINB2P05120 415 aa24.04■■□□□ 1.44
SKP2-204ENST00000508514 CFAP53Q96M91 514 aa24.04■■□□□ 1.44
SKP2-204ENST00000508514 ARFGEF1Q9Y6D6 1849 aa24.04■■□□□ 1.44
SKP2-204ENST00000508514 AFDNP55196 1824 aaKnown RBP24.03■■□□□ 1.44
SKP2-204ENST00000508514 C9orf131Q5VYM1 1079 aa24.03■■□□□ 1.44
SKP2-204ENST00000508514 A1BGP04217 495 aa24.02■■□□□ 1.44
SKP2-204ENST00000508514 CARMIL3Q8ND23 1372 aa24.02■■□□□ 1.44
SKP2-204ENST00000508514 U2AF1L5P0DN76 240 aaPredicted RBP24.01■■□□□ 1.43
SKP2-204ENST00000508514 U2AF1Q01081 240 aaKnown RBP eCLIP24.01■■□□□ 1.43
SKP2-204ENST00000508514 TBC1D9BQ66K14 1250 aa24.01■■□□□ 1.43
SKP2-204ENST00000508514 BTBD11A6QL63 1104 aa24■■□□□ 1.43
SKP2-204ENST00000508514 HSPA6P17066 643 aa24■■□□□ 1.43
SKP2-204ENST00000508514 BICDL1Q6ZP65 573 aa24■■□□□ 1.43
SKP2-204ENST00000508514 FMNL2Q96PY5 1086 aa24■■□□□ 1.43
SKP2-204ENST00000508514 TEX13AQ9BXU3 409 aaPredicted RBP24■■□□□ 1.43
SKP2-204ENST00000508514 NMRK2Q9NPI5 230 aa24■■□□□ 1.43
SKP2-204ENST00000508514 TBC1D2BQ9UPU7 963 aa24■■□□□ 1.43
SKP2-204ENST00000508514 PRAMEF22A3QJZ6 481 aa23.99■■□□□ 1.43
SKP2-204ENST00000508514 MCM10Q7L590 875 aa23.99■■□□□ 1.43
SKP2-204ENST00000508514 NUDCQ9Y266 331 aa23.99■■□□□ 1.43
SKP2-204ENST00000508514 USP16Q9Y5T5 823 aa23.99■■□□□ 1.43
SKP2-204ENST00000508514 A0A087WZG4 1122 aa23.98■■□□□ 1.43
SKP2-204ENST00000508514 IL6STP40189 918 aaPredicted RBP23.98■■□□□ 1.43
SKP2-204ENST00000508514 DCTN1Q14203 1278 aa23.98■■□□□ 1.43
SKP2-204ENST00000508514 PRELPP51888 382 aa23.97■■□□□ 1.43
SKP2-204ENST00000508514 CAMTA2O94983 1202 aa23.95■■□□□ 1.42
SKP2-204ENST00000508514 PIP4K2AP48426 406 aaPredicted RBP23.95■■□□□ 1.42
SKP2-204ENST00000508514 CCDC24Q8N4L8 307 aa23.95■■□□□ 1.42
SKP2-204ENST00000508514 RNF181Q9P0P0 153 aa23.95■■□□□ 1.42
SKP2-204ENST00000508514 ZNF330Q9Y3S2 320 aaPredicted RBP23.95■■□□□ 1.42
SKP2-204ENST00000508514 RASSF7Q02833 373 aa23.94■■□□□ 1.42
SKP2-204ENST00000508514 C2CD5Q86YS7 1000 aa23.94■■□□□ 1.42
SKP2-204ENST00000508514 TOMM70O94826 608 aa23.92■■□□□ 1.42
SKP2-204ENST00000508514 PRR5LQ6MZQ0 368 aa23.92■■□□□ 1.42
SKP2-204ENST00000508514 TTLL6Q8N841 843 aa23.92■■□□□ 1.42
SKP2-204ENST00000508514 SCN7AQ01118 1682 aa23.92■■□□□ 1.42
SKP2-204ENST00000508514 SBF1O95248 1867 aa23.92■■□□□ 1.42
SKP2-204ENST00000508514 DLEC1Q9Y238 1755 aa23.91■■□□□ 1.42
SKP2-204ENST00000508514 ANKRD31Q8N7Z5 1873 aa23.9■■□□□ 1.42
SKP2-204ENST00000508514 NBPF26B4DH59 902 aa23.9■■□□□ 1.42
SKP2-204ENST00000508514 H0YIN7 160 aa23.9■■□□□ 1.42
SKP2-204ENST00000508514 HTATSF1O43719 755 aaKnown RBP23.9■■□□□ 1.42
SKP2-204ENST00000508514 NBPF10Q6P3W6 841 aaKnown RBP23.9■■□□□ 1.42
SKP2-204ENST00000508514 NBPF15Q8N660 670 aa23.9■■□□□ 1.42
SKP2-204ENST00000508514 RTF1Q92541 710 aaKnown RBP23.9■■□□□ 1.42
SKP2-204ENST00000508514 BRIP1Q9BX63 1249 aa23.9■■□□□ 1.42
SKP2-204ENST00000508514 SNRPA1P09661 255 aaKnown RBP23.89■■□□□ 1.41
SKP2-204ENST00000508514 DZIP3Q86Y13 1208 aaKnown RBP23.89■■□□□ 1.41
SKP2-204ENST00000508514 PLEKHF1Q96S99 279 aa23.89■■□□□ 1.41
SKP2-204ENST00000508514 MIS18AQ9NYP9 233 aa23.89■■□□□ 1.41
SKP2-204ENST00000508514 NFKBIEO00221 500 aa23.88■■□□□ 1.41
SKP2-204ENST00000508514 SETDB2Q96T68 719 aa23.87■■□□□ 1.41
SKP2-204ENST00000508514 TAF7Q15545 349 aaPredicted RBP23.86■■□□□ 1.41
SKP2-204ENST00000508514 RRAGCQ9HB90 399 aa23.86■■□□□ 1.41
SKP2-204ENST00000508514 LMNB1P20700 586 aa23.84■■□□□ 1.41
SKP2-204ENST00000508514 PDE6BP35913 854 aa23.84■■□□□ 1.41
SKP2-204ENST00000508514 ZNF622Q969S3 477 aaKnown RBP eCLIP23.84■■□□□ 1.41
SKP2-204ENST00000508514 COL11A2P13942 1736 aaPredicted RBP23.84■■□□□ 1.41
SKP2-204ENST00000508514 KDM2BQ8NHM5 1336 aa23.84■■□□□ 1.41
SKP2-204ENST00000508514 BCORQ6W2J9 1755 aa23.83■■□□□ 1.41
SKP2-204ENST00000508514 DNAJC5GQ8N7S2 189 aa23.83■■□□□ 1.41
SKP2-204ENST00000508514 RBM46Q8TBY0 533 aaKnown RBP23.83■■□□□ 1.41
SKP2-204ENST00000508514 C21orf2O43822 256 aa23.82■■□□□ 1.4
SKP2-204ENST00000508514 CLEC4GQ6UXB4 293 aa23.82■■□□□ 1.4
SKP2-204ENST00000508514 CNBD1Q8NA66 436 aa23.82■■□□□ 1.4
SKP2-204ENST00000508514 THUMPD2Q9BTF0 503 aaKnown RBP23.82■■□□□ 1.4
SKP2-204ENST00000508514 SRGNP10124 158 aa23.81■■□□□ 1.4
SKP2-204ENST00000508514 NPM2Q86SE8 214 aaKnown RBP23.81■■□□□ 1.4
SKP2-204ENST00000508514 ZNF219Q9P2Y4 722 aaPredicted RBP23.81■■□□□ 1.4
SKP2-204ENST00000508514 PDZRN3Q9UPQ7 1066 aa23.81■■□□□ 1.4
SKP2-204ENST00000508514 APLP1P51693 650 aa23.8■■□□□ 1.4
SKP2-204ENST00000508514 ZC3H4Q9UPT8 1303 aaKnown RBP23.8■■□□□ 1.4
SKP2-204ENST00000508514 GLTPD2A6NH11 291 aa23.79■■□□□ 1.4
SKP2-204ENST00000508514 HLFQ16534 295 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms