RNA–Protein interactions for RNA: ENST00000508117.6

CAST-220, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-220ENST00000508117 WASHC2AQ641Q2 1341 aa12.77□□□□□ -0.37
CAST-220ENST00000508117 CD44P16070 742 aaKnown RBP12.76□□□□□ -0.37
CAST-220ENST00000508117 RFC4P35249 363 aa12.76□□□□□ -0.37
CAST-220ENST00000508117 SLC4A9Q96Q91 983 aa12.76□□□□□ -0.37
CAST-220ENST00000508117 MYH14Q7Z406 1995 aaKnown RBP12.76□□□□□ -0.37
CAST-220ENST00000508117 ERVV-2B6SEH9 535 aa12.75□□□□□ -0.37
CAST-220ENST00000508117 DALRD3Q5D0E6 543 aaKnown RBP12.75□□□□□ -0.37
CAST-220ENST00000508117 EYA1Q99502 592 aa12.75□□□□□ -0.37
CAST-220ENST00000508117 RRAGCQ9HB90 399 aa12.75□□□□□ -0.37
CAST-220ENST00000508117 CREBZFQ9NS37 354 aa12.75□□□□□ -0.37
CAST-220ENST00000508117 RNF181Q9P0P0 153 aa12.75□□□□□ -0.37
CAST-220ENST00000508117 EMILIN1Q9Y6C2 1016 aa12.75□□□□□ -0.37
CAST-220ENST00000508117 KDM6AO15550 1401 aaPredicted RBP12.74□□□□□ -0.37
CAST-220ENST00000508117 CDCA8Q53HL2 280 aa12.73□□□□□ -0.37
CAST-220ENST00000508117 HSP90AB1P08238 724 aaKnown RBP12.72□□□□□ -0.37
CAST-220ENST00000508117 HSPA1AP0DMV8 641 aaKnown RBP12.72□□□□□ -0.37
CAST-220ENST00000508117 HSPA1BP0DMV9 641 aaKnown RBP12.72□□□□□ -0.37
CAST-220ENST00000508117 USP42Q9H9J4 1324 aaKnown RBP12.71□□□□□ -0.37
CAST-220ENST00000508117 GABBR2O75899 941 aa12.71□□□□□ -0.37
CAST-220ENST00000508117 VEGFAP15692 232 aaPredicted RBP12.71□□□□□ -0.37
CAST-220ENST00000508117 GLTPD2A6NH11 291 aa12.7□□□□□ -0.38
CAST-220ENST00000508117 DDR1Q08345 913 aa12.7□□□□□ -0.38
CAST-220ENST00000508117 CARD14Q9BXL6 1004 aa12.7□□□□□ -0.38
CAST-220ENST00000508117 PPM1GO15355 546 aaPredicted RBP12.69□□□□□ -0.38
CAST-220ENST00000508117 TM4SF1P30408 202 aa12.69□□□□□ -0.38
CAST-220ENST00000508117 FKBP8Q14318 412 aa12.69□□□□□ -0.38
CAST-220ENST00000508117 ADAMTS7Q9UKP4 1686 aa12.68□□□□□ -0.38
CAST-220ENST00000508117 POLRMTO00411 1230 aaKnown RBP12.68□□□□□ -0.38
CAST-220ENST00000508117 LMNB1P20700 586 aa12.68□□□□□ -0.38
CAST-220ENST00000508117 CHRNA5P30532 468 aa12.68□□□□□ -0.38
CAST-220ENST00000508117 POLKQ9UBT6 870 aa12.68□□□□□ -0.38
CAST-220ENST00000508117 DLEC1Q9Y238 1755 aa12.68□□□□□ -0.38
CAST-220ENST00000508117 CRKLP46109 303 aaKnown RBP12.67□□□□□ -0.38
CAST-220ENST00000508117 NRXN2Q9P2S2 1712 aa12.67□□□□□ -0.38
CAST-220ENST00000508117 CCDC88AQ3V6T2 1871 aa12.66□□□□□ -0.38
CAST-220ENST00000508117 TJP1Q07157 1748 aa12.66□□□□□ -0.38
CAST-220ENST00000508117 CABP4P57796 275 aa12.66□□□□□ -0.38
CAST-220ENST00000508117 EIF4A2Q14240 407 aaKnown RBP12.66□□□□□ -0.38
CAST-220ENST00000508117 AMOTQ4VCS5 1084 aa12.66□□□□□ -0.38
CAST-220ENST00000508117 PLEKHO1Q53GL0 409 aaPredicted RBP12.66□□□□□ -0.38
CAST-220ENST00000508117 SRP68Q9UHB9 627 aaKnown RBP12.66□□□□□ -0.38
CAST-220ENST00000508117 TIAM2Q8IVF5 1701 aa12.65□□□□□ -0.38
CAST-220ENST00000508117 AFDNP55196 1824 aaKnown RBP12.65□□□□□ -0.38
CAST-220ENST00000508117 RASSF7Q02833 373 aa12.64□□□□□ -0.39
CAST-220ENST00000508117 INTS5Q6P9B9 1019 aaKnown RBP12.64□□□□□ -0.39
CAST-220ENST00000508117 DICER1Q9UPY3 1922 aaKnown RBP12.64□□□□□ -0.39
CAST-220ENST00000508117 POTECB2RU33 542 aa12.63□□□□□ -0.39
CAST-220ENST00000508117 PTCD1O75127 700 aaKnown RBP12.63□□□□□ -0.39
CAST-220ENST00000508117 ZPR1O75312 459 aa12.63□□□□□ -0.39
CAST-220ENST00000508117 SLC34A2O95436 690 aa12.63□□□□□ -0.39
CAST-220ENST00000508117 ZNF530Q6P9A1 599 aaPredicted RBP12.63□□□□□ -0.39
CAST-220ENST00000508117 TTLL6Q8N841 843 aa12.63□□□□□ -0.39
CAST-220ENST00000508117 MTHFSP49914 203 aa12.62□□□□□ -0.39
CAST-220ENST00000508117 DPY19L2Q6NUT2 758 aa12.62□□□□□ -0.39
CAST-220ENST00000508117 NFATC2IPQ8NCF5 419 aa12.62□□□□□ -0.39
CAST-220ENST00000508117 PRDM10Q9NQV6 1147 aa12.62□□□□□ -0.39
CAST-220ENST00000508117 SOS1Q07889 1333 aaPredicted RBP12.62□□□□□ -0.39
CAST-220ENST00000508117 SCN11AQ9UI33 1791 aa12.61□□□□□ -0.39
CAST-220ENST00000508117 USPL1Q5W0Q7 1092 aa12.61□□□□□ -0.39
CAST-220ENST00000508117 NARFQ9UHQ1 456 aa12.61□□□□□ -0.39
CAST-220ENST00000508117 NFKBIEO00221 500 aa12.6□□□□□ -0.39
CAST-220ENST00000508117 NFIXQ14938 502 aa12.6□□□□□ -0.39
CAST-220ENST00000508117 C1orf141Q5JVX7 400 aa12.6□□□□□ -0.39
CAST-220ENST00000508117 PDZRN3Q9UPQ7 1066 aa12.6□□□□□ -0.39
CAST-220ENST00000508117 FER1L6Q2WGJ9 1857 aa12.59□□□□□ -0.39
CAST-220ENST00000508117 CNTNAP1P78357 1384 aa12.58□□□□□ -0.4
CAST-220ENST00000508117 H0YIN7 160 aa12.58□□□□□ -0.4
CAST-220ENST00000508117 SERPINB2P05120 415 aa12.58□□□□□ -0.4
CAST-220ENST00000508117 LTBP3Q9NS15 1303 aa12.58□□□□□ -0.4
CAST-220ENST00000508117 COL15A1P39059 1388 aa12.57□□□□□ -0.4
CAST-220ENST00000508117 FOXN1O15353 648 aa12.57□□□□□ -0.4
CAST-220ENST00000508117 CYP19A1P11511 503 aaPredicted RBP12.57□□□□□ -0.4
CAST-220ENST00000508117 CLCN6P51797 869 aa12.57□□□□□ -0.4
CAST-220ENST00000508117 C2CD5Q86YS7 1000 aa12.57□□□□□ -0.4
CAST-220ENST00000508117 DNAJC10Q8IXB1 793 aa12.57□□□□□ -0.4
CAST-220ENST00000508117 BCL2L12Q9HB09 334 aa12.57□□□□□ -0.4
CAST-220ENST00000508117 PASKQ96RG2 1323 aa12.57□□□□□ -0.4
CAST-220ENST00000508117 CTCFP49711 727 aaPredicted RBP12.56□□□□□ -0.4
CAST-220ENST00000508117 ERFEQ4G0M1 354 aa12.56□□□□□ -0.4
CAST-220ENST00000508117 VSIG10Q8N0Z9 540 aa12.56□□□□□ -0.4
CAST-220ENST00000508117 MKRN1Q9UHC7 482 aaKnown RBP12.56□□□□□ -0.4
CAST-220ENST00000508117 MRC1P22897 1456 aa12.56□□□□□ -0.4
CAST-220ENST00000508117 SCN4AP35499 1836 aa12.55□□□□□ -0.4
CAST-220ENST00000508117 VIRMAQ69YN4 1812 aaKnown RBP12.55□□□□□ -0.4
CAST-220ENST00000508117 ANKRD31Q8N7Z5 1873 aa12.55□□□□□ -0.4
CAST-220ENST00000508117 SLC52A2Q9HAB3 445 aa12.55□□□□□ -0.4
CAST-220ENST00000508117 CARMIL3Q8ND23 1372 aa12.55□□□□□ -0.4
CAST-220ENST00000508117 TNNT2P45379 298 aaPredicted RBP12.54□□□□□ -0.4
CAST-220ENST00000508117 AKAP4Q5JQC9 854 aa12.54□□□□□ -0.4
CAST-220ENST00000508117 AEBP1Q8IUX7 1158 aa12.54□□□□□ -0.4
CAST-220ENST00000508117 AIDAQ96BJ3 306 aa12.54□□□□□ -0.4
CAST-220ENST00000508117 BRIP1Q9BX63 1249 aa12.54□□□□□ -0.4
CAST-220ENST00000508117 ZBTB1Q9Y2K1 713 aa12.54□□□□□ -0.4
CAST-220ENST00000508117 IQCA1LA6NCM1 817 aa12.53□□□□□ -0.4
CAST-220ENST00000508117 PDE6BP35913 854 aa12.53□□□□□ -0.4
CAST-220ENST00000508117 LDHDQ86WU2 507 aa12.53□□□□□ -0.4
CAST-220ENST00000508117 ZNF579Q8NAF0 562 aaKnown RBP12.53□□□□□ -0.4
CAST-220ENST00000508117 L3MBTL3Q96JM7 780 aaPredicted RBP12.53□□□□□ -0.4
CAST-220ENST00000508117 TAOK3Q9H2K8 898 aa12.53□□□□□ -0.4
CAST-220ENST00000508117 WBP1LQ9NX94 342 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms