RNA–Protein interactions for RNA: ENST00000507594.1

SMAD1-207, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 558 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-207ENST00000507594 ZNF496Q96IT1 587 aaPredicted RBP11.66□□□□□ -0.54
SMAD1-207ENST00000507594 UBR2Q8IWV8 1755 aa11.65□□□□□ -0.54
SMAD1-207ENST00000507594 LOC102724428A0A0B4J2F2 783 aa11.65□□□□□ -0.54
SMAD1-207ENST00000507594 ZNF853P0CG23 659 aa11.65□□□□□ -0.54
SMAD1-207ENST00000507594 EIF2S2P20042 333 aaKnown RBP11.65□□□□□ -0.54
SMAD1-207ENST00000507594 SIK1P57059 783 aa11.65□□□□□ -0.54
SMAD1-207ENST00000507594 NPM2Q86SE8 214 aaKnown RBP11.65□□□□□ -0.54
SMAD1-207ENST00000507594 POTEDQ86YR6 584 aa11.65□□□□□ -0.54
SMAD1-207ENST00000507594 NECTIN2Q92692 538 aa11.65□□□□□ -0.54
SMAD1-207ENST00000507594 ZNF330Q9Y3S2 320 aaPredicted RBP11.65□□□□□ -0.54
SMAD1-207ENST00000507594 HEG1Q9ULI3 1381 aa11.65□□□□□ -0.55
SMAD1-207ENST00000507594 KCPQ6ZWJ8 1503 aa11.65□□□□□ -0.55
SMAD1-207ENST00000507594 SNRPA1P09661 255 aaKnown RBP11.64□□□□□ -0.55
SMAD1-207ENST00000507594 EIF4A1P60842 406 aaKnown RBP11.64□□□□□ -0.55
SMAD1-207ENST00000507594 EN1Q05925 392 aaPredicted RBP11.64□□□□□ -0.55
SMAD1-207ENST00000507594 KRT24Q2M2I5 525 aa11.64□□□□□ -0.55
SMAD1-207ENST00000507594 TWISTNBQ3B726 338 aaPredicted RBP11.64□□□□□ -0.55
SMAD1-207ENST00000507594 DUSP27Q5VZP5 1158 aa11.64□□□□□ -0.55
SMAD1-207ENST00000507594 DEFB132Q7Z7B7 95 aa11.64□□□□□ -0.55
SMAD1-207ENST00000507594 CCDC125Q86Z20 511 aa11.64□□□□□ -0.55
SMAD1-207ENST00000507594 C5P01031 1676 aa11.64□□□□□ -0.55
SMAD1-207ENST00000507594 LAMB4A4D0S4 1761 aa11.64□□□□□ -0.55
SMAD1-207ENST00000507594 LY75O60449 1722 aa11.63□□□□□ -0.55
SMAD1-207ENST00000507594 STARD3NLO95772 234 aa11.63□□□□□ -0.55
SMAD1-207ENST00000507594 KCNQ4P56696 695 aa11.63□□□□□ -0.55
SMAD1-207ENST00000507594 TXNRD1Q16881 649 aa11.63□□□□□ -0.55
SMAD1-207ENST00000507594 HDGFL1Q5TGJ6 251 aa11.63□□□□□ -0.55
SMAD1-207ENST00000507594 DNAJC10Q8IXB1 793 aa11.63□□□□□ -0.55
SMAD1-207ENST00000507594 TEX13AQ9BXU3 409 aaPredicted RBP11.63□□□□□ -0.55
SMAD1-207ENST00000507594 EZH2Q15910 746 aaKnown RBP11.62□□□□□ -0.55
SMAD1-207ENST00000507594 C8orf58Q8NAV2 365 aa11.62□□□□□ -0.55
SMAD1-207ENST00000507594 UPF1Q92900 1129 aaKnown RBP eCLIP11.62□□□□□ -0.55
SMAD1-207ENST00000507594 AK7Q96M32 723 aa11.62□□□□□ -0.55
SMAD1-207ENST00000507594 ARXQ96QS3 562 aa11.62□□□□□ -0.55
SMAD1-207ENST00000507594 STK31Q9BXU1 1019 aa11.62□□□□□ -0.55
SMAD1-207ENST00000507594 CHMP4AQ9BY43 222 aa11.62□□□□□ -0.55
SMAD1-207ENST00000507594 TJP1Q07157 1748 aa11.62□□□□□ -0.55
SMAD1-207ENST00000507594 EP400Q96L91 3159 aa11.62□□□□□ -0.55
SMAD1-207ENST00000507594 RGPD3A6NKT7 1758 aaPredicted RBP11.62□□□□□ -0.55
SMAD1-207ENST00000507594 RGPD4Q7Z3J3 1758 aa11.62□□□□□ -0.55
SMAD1-207ENST00000507594 PRAMEF22A3QJZ6 481 aa11.61□□□□□ -0.55
SMAD1-207ENST00000507594 TCERG1O14776 1098 aaKnown RBP11.61□□□□□ -0.55
SMAD1-207ENST00000507594 PLSCR1O15162 318 aa11.61□□□□□ -0.55
SMAD1-207ENST00000507594 CENPBP07199 599 aaPredicted RBP11.61□□□□□ -0.55
SMAD1-207ENST00000507594 HMGB2P26583 209 aaKnown RBP11.61□□□□□ -0.55
SMAD1-207ENST00000507594 CANXP27824 592 aaKnown RBP11.61□□□□□ -0.55
SMAD1-207ENST00000507594 SLC27A3Q5K4L6 730 aa11.61□□□□□ -0.55
SMAD1-207ENST00000507594 GIGYF1O75420 1035 aaPredicted RBP11.6□□□□□ -0.55
SMAD1-207ENST00000507594 CCDC30Q5VVM6 783 aa11.6□□□□□ -0.55
SMAD1-207ENST00000507594 TSPYL6Q8N831 410 aa11.6□□□□□ -0.55
SMAD1-207ENST00000507594 CIZ1Q9ULV3 898 aaPredicted RBP11.6□□□□□ -0.55
SMAD1-207ENST00000507594 HOXB7P09629 217 aa11.59□□□□□ -0.55
SMAD1-207ENST00000507594 MYL6BP14649 208 aa11.59□□□□□ -0.55
SMAD1-207ENST00000507594 PIP4K2AP48426 406 aaPredicted RBP11.59□□□□□ -0.55
SMAD1-207ENST00000507594 ITPK1Q13572 414 aa11.59□□□□□ -0.55
SMAD1-207ENST00000507594 LINC00116Q8NCU8 138 aa11.59□□□□□ -0.55
SMAD1-207ENST00000507594 SMC4Q9NTJ3 1288 aa11.59□□□□□ -0.55
SMAD1-207ENST00000507594 STK32BQ9NY57 414 aa11.59□□□□□ -0.55
SMAD1-207ENST00000507594 TAOK2Q9UL54 1235 aa11.59□□□□□ -0.55
SMAD1-207ENST00000507594 SOS1Q07889 1333 aaPredicted RBP11.59□□□□□ -0.55
SMAD1-207ENST00000507594 TAF1LQ8IZX4 1826 aa11.58□□□□□ -0.56
SMAD1-207ENST00000507594 C4BP0C0L5 1744 aa11.58□□□□□ -0.56
SMAD1-207ENST00000507594 COL5A3P25940 1745 aaPredicted RBP11.58□□□□□ -0.56
SMAD1-207ENST00000507594 GNPATO15228 680 aa11.58□□□□□ -0.56
SMAD1-207ENST00000507594 PHF14O94880 888 aa11.58□□□□□ -0.56
SMAD1-207ENST00000507594 CRKLP46109 303 aaKnown RBP11.58□□□□□ -0.56
SMAD1-207ENST00000507594 NBPF14Q5TI25 921 aa11.58□□□□□ -0.56
SMAD1-207ENST00000507594 SLC4A9Q96Q91 983 aa11.58□□□□□ -0.56
SMAD1-207ENST00000507594 BCL2L13Q9BXK5 485 aa11.58□□□□□ -0.56
SMAD1-207ENST00000507594 CCDC87Q9NVE4 849 aa11.58□□□□□ -0.56
SMAD1-207ENST00000507594 USP16Q9Y5T5 823 aa11.58□□□□□ -0.56
SMAD1-207ENST00000507594 ZNF831Q5JPB2 1677 aa11.57□□□□□ -0.56
SMAD1-207ENST00000507594 RREB1Q92766 1687 aa11.57□□□□□ -0.56
SMAD1-207ENST00000507594 ANXA1P04083 346 aa11.57□□□□□ -0.56
SMAD1-207ENST00000507594 A1BGP04217 495 aa11.57□□□□□ -0.56
SMAD1-207ENST00000507594 CAMKK2Q96RR4 588 aa11.57□□□□□ -0.56
SMAD1-207ENST00000507594 TFCP2L1Q9NZI6 479 aa11.57□□□□□ -0.56
SMAD1-207ENST00000507594 CHPF2Q9P2E5 772 aa11.57□□□□□ -0.56
SMAD1-207ENST00000507594 NUP188Q5SRE5 1749 aa11.57□□□□□ -0.56
SMAD1-207ENST00000507594 VAMP4O75379 141 aa11.56□□□□□ -0.56
SMAD1-207ENST00000507594 CT47B1P0C2W7 299 aaPredicted RBP11.56□□□□□ -0.56
SMAD1-207ENST00000507594 CYP19A1P11511 503 aaPredicted RBP11.56□□□□□ -0.56
SMAD1-207ENST00000507594 AIMP1Q12904 312 aaKnown RBP11.56□□□□□ -0.56
SMAD1-207ENST00000507594 GSE1Q14687 1217 aa11.56□□□□□ -0.56
SMAD1-207ENST00000507594 KIF6Q6ZMV9 814 aa11.56□□□□□ -0.56
SMAD1-207ENST00000507594 TRMT2AQ8IZ69 625 aaKnown RBP11.56□□□□□ -0.56
SMAD1-207ENST00000507594 LRRC4BQ9NT99 713 aa11.56□□□□□ -0.56
SMAD1-207ENST00000507594 DBF4Q9UBU7 674 aaPredicted RBP11.56□□□□□ -0.56
SMAD1-207ENST00000507594 ZBTB1Q9Y2K1 713 aa11.56□□□□□ -0.56
SMAD1-207ENST00000507594 RTCBQ9Y3I0 505 aaKnown RBP11.56□□□□□ -0.56
SMAD1-207ENST00000507594 CICQ96RK0 1608 aaPredicted RBP11.56□□□□□ -0.56
SMAD1-207ENST00000507594 CNTNAP4Q9C0A0 1308 aa11.56□□□□□ -0.56
SMAD1-207ENST00000507594 FRAT1Q92837 279 aaPredicted RBP11.55□□□□□ -0.56
SMAD1-207ENST00000507594 ERBB4Q15303 1308 aa11.55□□□□□ -0.56
SMAD1-207ENST00000507594 ZNF428Q96B54 188 aa11.54□□□□□ -0.56
SMAD1-207ENST00000507594 DDX21Q9NR30 783 aaKnown RBP eCLIP11.54□□□□□ -0.56
SMAD1-207ENST00000507594 HYPKQ9NX55 129 aa11.54□□□□□ -0.56
SMAD1-207ENST00000507594 RCAN3Q9UKA8 241 aa11.54□□□□□ -0.56
SMAD1-207ENST00000507594 COL15A1P39059 1388 aa11.54□□□□□ -0.56
SMAD1-207ENST00000507594 A0A087WZG4 1122 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms