RNA–Protein interactions for RNA: ENST00000507559.1

GNPDA1-209, Transcript of glucosamine-6-phosphate deaminase 1, humanhuman

TSL 3

Gene GNPDA1, Length 413 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPDA1-209ENST00000507559 KRT28Q7Z3Y7 464 aa12.02□□□□□ -0.49
GNPDA1-209ENST00000507559 GJD4Q96KN9 370 aaPredicted RBP12.02□□□□□ -0.49
GNPDA1-209ENST00000507559 LRRCC1Q9C099 1032 aa12.02□□□□□ -0.49
GNPDA1-209ENST00000507559 HSP90AA1P07900 732 aaKnown RBP12.01□□□□□ -0.49
GNPDA1-209ENST00000507559 TEFQ10587 303 aa12.01□□□□□ -0.49
GNPDA1-209ENST00000507559 SKOR2Q2VWA4 1001 aaPredicted RBP12.01□□□□□ -0.49
GNPDA1-209ENST00000507559 ARHGEF25Q86VW2 580 aa12.01□□□□□ -0.49
GNPDA1-209ENST00000507559 KIF2CQ99661 725 aa12.01□□□□□ -0.49
GNPDA1-209ENST00000507559 IBTKQ9P2D0 1353 aaPredicted RBP12.01□□□□□ -0.49
GNPDA1-209ENST00000507559 THSD7AQ9UPZ6 1657 aa12□□□□□ -0.49
GNPDA1-209ENST00000507559 TNS1Q9HBL0 1735 aaKnown RBP12□□□□□ -0.49
GNPDA1-209ENST00000507559 ERC2O15083 957 aa12□□□□□ -0.49
GNPDA1-209ENST00000507559 UBTFL1P0CB47 393 aaPredicted RBP12□□□□□ -0.49
GNPDA1-209ENST00000507559 SDSP20132 328 aa12□□□□□ -0.49
GNPDA1-209ENST00000507559 PDE1AP54750 535 aa12□□□□□ -0.49
GNPDA1-209ENST00000507559 HSP90AB4PQ58FF6 505 aa12□□□□□ -0.49
GNPDA1-209ENST00000507559 C1orf141Q5JVX7 400 aa12□□□□□ -0.49
GNPDA1-209ENST00000507559 NUTM2GQ5VZR2 741 aa12□□□□□ -0.49
GNPDA1-209ENST00000507559 UNC5CLQ8IV45 518 aa12□□□□□ -0.49
GNPDA1-209ENST00000507559 CABLES1Q8TDN4 633 aa12□□□□□ -0.49
GNPDA1-209ENST00000507559 LTV1Q96GA3 475 aaPredicted RBP12□□□□□ -0.49
GNPDA1-209ENST00000507559 USP26Q9BXU7 913 aa12□□□□□ -0.49
GNPDA1-209ENST00000507559 STAP2Q9UGK3 403 aa12□□□□□ -0.49
GNPDA1-209ENST00000507559 SRCAPQ6ZRS2 3230 aa12□□□□□ -0.49
GNPDA1-209ENST00000507559 F6X3S4 739 aa11.99□□□□□ -0.49
GNPDA1-209ENST00000507559 ST18O60284 1047 aa11.99□□□□□ -0.49
GNPDA1-209ENST00000507559 GCP02774 474 aa11.99□□□□□ -0.49
GNPDA1-209ENST00000507559 MCCP23508 829 aa11.99□□□□□ -0.49
GNPDA1-209ENST00000507559 MCM2P49736 904 aa11.99□□□□□ -0.49
GNPDA1-209ENST00000507559 EIF4A1P60842 406 aaKnown RBP11.99□□□□□ -0.49
GNPDA1-209ENST00000507559 NBPF6Q5VWK0 638 aa11.99□□□□□ -0.49
GNPDA1-209ENST00000507559 NBPF4Q96M43 638 aa11.99□□□□□ -0.49
GNPDA1-209ENST00000507559 ADAMTS7Q9UKP4 1686 aa11.98□□□□□ -0.49
GNPDA1-209ENST00000507559 SALL3Q9BXA9 1300 aa11.98□□□□□ -0.49
GNPDA1-209ENST00000507559 GOLGA6L22H0YM25 854 aa11.98□□□□□ -0.49
GNPDA1-209ENST00000507559 ZNF530Q6P9A1 599 aaPredicted RBP11.98□□□□□ -0.49
GNPDA1-209ENST00000507559 SSH3Q8TE77 659 aa11.98□□□□□ -0.49
GNPDA1-209ENST00000507559 CWC22Q9HCG8 908 aaKnown RBP11.98□□□□□ -0.49
GNPDA1-209ENST00000507559 ALDH1L1O75891 902 aa11.97□□□□□ -0.49
GNPDA1-209ENST00000507559 MX1P20591 662 aa11.97□□□□□ -0.49
GNPDA1-209ENST00000507559 ANAPC15P60006 121 aa11.97□□□□□ -0.49
GNPDA1-209ENST00000507559 NUCB2P80303 420 aa11.97□□□□□ -0.49
GNPDA1-209ENST00000507559 RAB3GAP1Q15042 981 aa11.97□□□□□ -0.49
GNPDA1-209ENST00000507559 CLEC17AQ6ZS10 378 aa11.97□□□□□ -0.49
GNPDA1-209ENST00000507559 BTBD11A6QL63 1104 aa11.96□□□□□ -0.49
GNPDA1-209ENST00000507559 PLEKHG5O94827 1062 aa11.96□□□□□ -0.49
GNPDA1-209ENST00000507559 C16orf71Q8IYS4 520 aaPredicted RBP11.96□□□□□ -0.49
GNPDA1-209ENST00000507559 DNAAF4Q8WXU2 420 aa11.96□□□□□ -0.49
GNPDA1-209ENST00000507559 USP44Q9H0E7 712 aa11.96□□□□□ -0.49
GNPDA1-209ENST00000507559 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.96□□□□□ -0.49
GNPDA1-209ENST00000507559 DBF4Q9UBU7 674 aaPredicted RBP11.96□□□□□ -0.49
GNPDA1-209ENST00000507559 TUBGCP6Q96RT7 1819 aa11.95□□□□□ -0.5
GNPDA1-209ENST00000507559 RNMTO43148 476 aaKnown RBP11.95□□□□□ -0.5
GNPDA1-209ENST00000507559 SMARCA5O60264 1052 aaPredicted RBP11.95□□□□□ -0.5
GNPDA1-209ENST00000507559 POLA2Q14181 598 aa11.95□□□□□ -0.5
GNPDA1-209ENST00000507559 VPS72Q15906 364 aa11.95□□□□□ -0.5
GNPDA1-209ENST00000507559 ANKRD24Q8TF21 1146 aa11.95□□□□□ -0.5
GNPDA1-209ENST00000507559 IL17RAQ96F46 866 aa11.95□□□□□ -0.5
GNPDA1-209ENST00000507559 LRRFIP2Q9Y608 721 aaKnown RBP11.95□□□□□ -0.5
GNPDA1-209ENST00000507559 LRP5O75197 1615 aa11.95□□□□□ -0.5
GNPDA1-209ENST00000507559 HEG1Q9ULI3 1381 aa11.94□□□□□ -0.5
GNPDA1-209ENST00000507559 TRAK2O60296 914 aa11.94□□□□□ -0.5
GNPDA1-209ENST00000507559 DDX58O95786 925 aaKnown RBP11.94□□□□□ -0.5
GNPDA1-209ENST00000507559 MTX1Q13505 466 aa11.94□□□□□ -0.5
GNPDA1-209ENST00000507559 USHBP1Q8N6Y0 703 aa11.94□□□□□ -0.5
GNPDA1-209ENST00000507559 OTUD7AQ8TE49 926 aaPredicted RBP11.94□□□□□ -0.5
GNPDA1-209ENST00000507559 KIF1BPQ96EK5 621 aa11.94□□□□□ -0.5
GNPDA1-209ENST00000507559 HYPKQ9NX55 129 aa11.94□□□□□ -0.5
GNPDA1-209ENST00000507559 SIPA1L3O60292 1781 aaPredicted RBP11.94□□□□□ -0.5
GNPDA1-209ENST00000507559 GOLGA6L3A6NEY3 463 aa11.93□□□□□ -0.5
GNPDA1-209ENST00000507559 BEND3Q5T5X7 828 aa11.93□□□□□ -0.5
GNPDA1-209ENST00000507559 LMOD2Q6P5Q4 547 aa11.93□□□□□ -0.5
GNPDA1-209ENST00000507559 ERC1Q8IUD2 1116 aa11.93□□□□□ -0.5
GNPDA1-209ENST00000507559 SEPT12Q8IYM1 358 aa11.93□□□□□ -0.5
GNPDA1-209ENST00000507559 SPRYD3Q8NCJ5 442 aa11.93□□□□□ -0.5
GNPDA1-209ENST00000507559 TNPO1Q92973 898 aaKnown RBP11.93□□□□□ -0.5
GNPDA1-209ENST00000507559 ESYT1Q9BSJ8 1104 aa11.93□□□□□ -0.5
GNPDA1-209ENST00000507559 EXOC6BQ9Y2D4 811 aa11.93□□□□□ -0.5
GNPDA1-209ENST00000507559 RGPD2P0DJD1 1756 aa11.92□□□□□ -0.5
GNPDA1-209ENST00000507559 USP42Q9H9J4 1324 aaKnown RBP11.92□□□□□ -0.5
GNPDA1-209ENST00000507559 PNMA6EA0A0J9YXQ4 647 aa11.92□□□□□ -0.5
GNPDA1-209ENST00000507559 APBB1O00213 710 aa11.92□□□□□ -0.5
GNPDA1-209ENST00000507559 WNK3Q9BYP7 1800 aa11.92□□□□□ -0.5
GNPDA1-209ENST00000507559 TTC41PQ6P2S7 1318 aa11.91□□□□□ -0.5
GNPDA1-209ENST00000507559 FSD2A1L4K1 749 aa11.91□□□□□ -0.5
GNPDA1-209ENST00000507559 ONECUT3O60422 494 aaPredicted RBP11.91□□□□□ -0.5
GNPDA1-209ENST00000507559 DEFB132Q7Z7B7 95 aa11.91□□□□□ -0.5
GNPDA1-209ENST00000507559 RAPGEF4Q8WZA2 1011 aa11.91□□□□□ -0.5
GNPDA1-209ENST00000507559 GPATCH3Q96I76 525 aa11.91□□□□□ -0.5
GNPDA1-209ENST00000507559 LGR6Q9HBX8 967 aa11.91□□□□□ -0.5
GNPDA1-209ENST00000507559 CHPF2Q9P2E5 772 aa11.91□□□□□ -0.5
GNPDA1-209ENST00000507559 SPG7Q9UQ90 795 aa11.91□□□□□ -0.5
GNPDA1-209ENST00000507559 RREB1Q92766 1687 aa11.91□□□□□ -0.5
GNPDA1-209ENST00000507559 ERBB3P21860 1342 aa11.9□□□□□ -0.5
GNPDA1-209ENST00000507559 GIGYF1O75420 1035 aaPredicted RBP11.9□□□□□ -0.5
GNPDA1-209ENST00000507559 EIF2S2P20042 333 aaKnown RBP11.9□□□□□ -0.5
GNPDA1-209ENST00000507559 CHMLP26374 656 aa11.9□□□□□ -0.5
GNPDA1-209ENST00000507559 KSR2Q6VAB6 950 aa11.9□□□□□ -0.5
GNPDA1-209ENST00000507559 PPP1R42Q7Z4L9 355 aa11.9□□□□□ -0.5
GNPDA1-209ENST00000507559 CCDC125Q86Z20 511 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms