RNA–Protein interactions for RNA: ENST00000506971.1

CALCOCO2-208, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 519 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-208ENST00000506971 LARP1Q6PKG0 1096 aaKnown RBP8.2□□□□□ -1.1
CALCOCO2-208ENST00000506971 SLC9A9Q8IVB4 645 aa8.2□□□□□ -1.1
CALCOCO2-208ENST00000506971 PLEKHM2Q8IWE5 1019 aa8.2□□□□□ -1.1
CALCOCO2-208ENST00000506971 CHMP7Q8WUX9 453 aaPredicted RBP8.2□□□□□ -1.1
CALCOCO2-208ENST00000506971 SLC4A9Q96Q91 983 aa8.2□□□□□ -1.1
CALCOCO2-208ENST00000506971 ENAMQ9NRM1 1142 aa8.2□□□□□ -1.1
CALCOCO2-208ENST00000506971 CHMP3Q9Y3E7 222 aa8.2□□□□□ -1.1
CALCOCO2-208ENST00000506971 A0A1W2PNR3 127 aa8.19□□□□□ -1.1
CALCOCO2-208ENST00000506971 DCDC2BA2VCK2 349 aa8.19□□□□□ -1.1
CALCOCO2-208ENST00000506971 CELA2BP08218 269 aaPredicted RBP8.19□□□□□ -1.1
CALCOCO2-208ENST00000506971 BMP4P12644 408 aa8.19□□□□□ -1.1
CALCOCO2-208ENST00000506971 RFX1P22670 979 aa8.19□□□□□ -1.1
CALCOCO2-208ENST00000506971 CDCA8Q53HL2 280 aa8.19□□□□□ -1.1
CALCOCO2-208ENST00000506971 HINFPQ9BQA5 517 aa8.19□□□□□ -1.1
CALCOCO2-208ENST00000506971 KHNYNO15037 678 aaKnown RBP8.18□□□□□ -1.1
CALCOCO2-208ENST00000506971 ZBTB7BO15156 539 aaPredicted RBP8.18□□□□□ -1.1
CALCOCO2-208ENST00000506971 TSEN2Q8NCE0 465 aaKnown RBP8.18□□□□□ -1.1
CALCOCO2-208ENST00000506971 L3MBTL2Q969R5 705 aa8.18□□□□□ -1.1
CALCOCO2-208ENST00000506971 PPP1R12CQ9BZL4 782 aa8.18□□□□□ -1.1
CALCOCO2-208ENST00000506971 ZCCHC2Q9C0B9 1178 aaKnown RBP8.18□□□□□ -1.1
CALCOCO2-208ENST00000506971 SCHIP1Q9P0W5 487 aaPredicted RBP8.18□□□□□ -1.1
CALCOCO2-208ENST00000506971 MAFBQ9Y5Q3 323 aaPredicted RBP8.18□□□□□ -1.1
CALCOCO2-208ENST00000506971 ATXN7O15265 892 aaPredicted RBP8.17□□□□□ -1.1
CALCOCO2-208ENST00000506971 THBS1P07996 1170 aa8.17□□□□□ -1.1
CALCOCO2-208ENST00000506971 TXLNAP40222 546 aa8.17□□□□□ -1.1
CALCOCO2-208ENST00000506971 MTFR1Q15390 333 aa8.17□□□□□ -1.1
CALCOCO2-208ENST00000506971 FIGNL1Q6PIW4 674 aa8.17□□□□□ -1.1
CALCOCO2-208ENST00000506971 LARGE2Q8N3Y3 721 aa8.17□□□□□ -1.1
CALCOCO2-208ENST00000506971 C1orf216Q8TAB5 229 aa8.17□□□□□ -1.1
CALCOCO2-208ENST00000506971 CFHR5Q9BXR6 569 aa8.17□□□□□ -1.1
CALCOCO2-208ENST00000506971 HCN4Q9Y3Q4 1203 aa8.17□□□□□ -1.1
CALCOCO2-208ENST00000506971 SERTM1A2A2V5 107 aa8.16□□□□□ -1.1
CALCOCO2-208ENST00000506971 BNIP3LO60238 219 aa8.16□□□□□ -1.1
CALCOCO2-208ENST00000506971 ATP4AP20648 1035 aa8.16□□□□□ -1.1
CALCOCO2-208ENST00000506971 FGFR3P22607 806 aa8.16□□□□□ -1.1
CALCOCO2-208ENST00000506971 NOS2P35228 1153 aa8.16□□□□□ -1.1
CALCOCO2-208ENST00000506971 LBRQ14739 615 aaKnown RBP8.16□□□□□ -1.1
CALCOCO2-208ENST00000506971 ACDQ96AP0 544 aa8.16□□□□□ -1.1
CALCOCO2-208ENST00000506971 TSPAN10Q9H1Z9 355 aaPredicted RBP8.16□□□□□ -1.1
CALCOCO2-208ENST00000506971 RRAGCQ9HB90 399 aa8.16□□□□□ -1.1
CALCOCO2-208ENST00000506971 ATXN7L1Q9ULK2 861 aaPredicted RBP8.16□□□□□ -1.1
CALCOCO2-208ENST00000506971 IQSEC3Q9UPP2 1182 aaPredicted RBP8.16□□□□□ -1.1
CALCOCO2-208ENST00000506971 PCDHGC4Q9Y5F7 938 aa8.16□□□□□ -1.1
CALCOCO2-208ENST00000506971 PPP1R12BO60237 982 aaPredicted RBP8.15□□□□□ -1.1
CALCOCO2-208ENST00000506971 BCRP11274 1271 aa8.15□□□□□ -1.1
CALCOCO2-208ENST00000506971 AMPD1P23109 780 aa8.15□□□□□ -1.1
CALCOCO2-208ENST00000506971 IRS1P35568 1242 aa8.15□□□□□ -1.1
CALCOCO2-208ENST00000506971 MAP2K3P46734 347 aa8.15□□□□□ -1.1
CALCOCO2-208ENST00000506971 CTBSQ01459 385 aa8.15□□□□□ -1.1
CALCOCO2-208ENST00000506971 LRRC69Q6ZNQ3 347 aa8.15□□□□□ -1.1
CALCOCO2-208ENST00000506971 NGLY1Q96IV0 654 aa8.15□□□□□ -1.1
CALCOCO2-208ENST00000506971 OXCT2Q9BYC2 517 aaPredicted RBP8.15□□□□□ -1.1
CALCOCO2-208ENST00000506971 CRISPLD1Q9H336 500 aa8.15□□□□□ -1.1
CALCOCO2-208ENST00000506971 VRTNQ9H8Y1 702 aa8.15□□□□□ -1.1
CALCOCO2-208ENST00000506971 SEC13P55735 322 aa8.14□□□□□ -1.11
CALCOCO2-208ENST00000506971 SH3PXD2AQ5TCZ1 1133 aa8.14□□□□□ -1.11
CALCOCO2-208ENST00000506971 RHPN1Q8TCX5 695 aa8.14□□□□□ -1.11
CALCOCO2-208ENST00000506971 ZDHHC1Q8WTX9 485 aa8.14□□□□□ -1.11
CALCOCO2-208ENST00000506971 KLRG1Q96E93 195 aa8.14□□□□□ -1.11
CALCOCO2-208ENST00000506971 ZIC5Q96T25 663 aa8.14□□□□□ -1.11
CALCOCO2-208ENST00000506971 RNF225M0QZC1 329 aaPredicted RBP8.13□□□□□ -1.11
CALCOCO2-208ENST00000506971 CD33P20138 364 aa8.13□□□□□ -1.11
CALCOCO2-208ENST00000506971 PODNQ7Z5L7 613 aa8.13□□□□□ -1.11
CALCOCO2-208ENST00000506971 NLRP8Q86W28 1048 aa8.13□□□□□ -1.11
CALCOCO2-208ENST00000506971 GALNT6Q8NCL4 622 aa8.13□□□□□ -1.11
CALCOCO2-208ENST00000506971 GAS2L2Q8NHY3 880 aa8.13□□□□□ -1.11
CALCOCO2-208ENST00000506971 SCG3Q8WXD2 468 aaKnown RBP8.13□□□□□ -1.11
CALCOCO2-208ENST00000506971 ZDHHC3Q9NYG2 299 aa8.13□□□□□ -1.11
CALCOCO2-208ENST00000506971 PRR12Q9ULL5 1215 aa8.13□□□□□ -1.11
CALCOCO2-208ENST00000506971 DNMT3AQ9Y6K1 912 aaPredicted RBP8.13□□□□□ -1.11
CALCOCO2-208ENST00000506971 ARHGEF15O94989 841 aa8.12□□□□□ -1.11
CALCOCO2-208ENST00000506971 DPYDQ12882 1025 aa8.12□□□□□ -1.11
CALCOCO2-208ENST00000506971 TEAD4Q15561 434 aa8.12□□□□□ -1.11
CALCOCO2-208ENST00000506971 CRTC2Q53ET0 693 aaPredicted RBP8.12□□□□□ -1.11
CALCOCO2-208ENST00000506971 SCARF2Q96GP6 870 aaPredicted RBP8.12□□□□□ -1.11
CALCOCO2-208ENST00000506971 MAPTP10636 758 aaKnown RBP8.11□□□□□ -1.11
CALCOCO2-208ENST00000506971 PSMA6P60900 246 aaKnown RBP8.11□□□□□ -1.11
CALCOCO2-208ENST00000506971 FOXK2Q01167 660 aa8.11□□□□□ -1.11
CALCOCO2-208ENST00000506971 CNTNAP5Q8WYK1 1306 aa8.1□□□□□ -1.11
CALCOCO2-208ENST00000506971 EPHA4P54764 986 aa8.1□□□□□ -1.11
CALCOCO2-208ENST00000506971 UBAP2LQ14157 1087 aaKnown RBP8.1□□□□□ -1.11
CALCOCO2-208ENST00000506971 SIX5Q8N196 739 aa8.1□□□□□ -1.11
CALCOCO2-208ENST00000506971 PHACTR1Q9C0D0 580 aa8.1□□□□□ -1.11
CALCOCO2-208ENST00000506971 GGA1Q9UJY5 639 aa8.1□□□□□ -1.11
CALCOCO2-208ENST00000506971 ATAD2Q6PL18 1390 aa8.1□□□□□ -1.11
CALCOCO2-208ENST00000506971 NEURL1BA8MQ27 555 aa8.09□□□□□ -1.11
CALCOCO2-208ENST00000506971 USP17L15C9J2P7 530 aa8.09□□□□□ -1.11
CALCOCO2-208ENST00000506971 USP17L10C9JJH3 530 aa8.09□□□□□ -1.11
CALCOCO2-208ENST00000506971 USP17L13C9JLJ4 530 aa8.09□□□□□ -1.11
CALCOCO2-208ENST00000506971 USP17L12C9JPN9 530 aa8.09□□□□□ -1.11
CALCOCO2-208ENST00000506971 USP17L11C9JVI0 530 aa8.09□□□□□ -1.11
CALCOCO2-208ENST00000506971 USP17L21D6R901 530 aa8.09□□□□□ -1.11
CALCOCO2-208ENST00000506971 USP17L18D6R9N7 530 aa8.09□□□□□ -1.11
CALCOCO2-208ENST00000506971 USP17L22D6RA61 530 aa8.09□□□□□ -1.11
CALCOCO2-208ENST00000506971 USP17L17D6RBQ6 530 aa8.09□□□□□ -1.11
CALCOCO2-208ENST00000506971 USP17L19D6RCP7 530 aa8.09□□□□□ -1.11
CALCOCO2-208ENST00000506971 USP17L20D6RJB6 530 aa8.09□□□□□ -1.11
CALCOCO2-208ENST00000506971 C2CD2LO14523 706 aa8.09□□□□□ -1.11
CALCOCO2-208ENST00000506971 GDF11O95390 407 aa8.09□□□□□ -1.11
CALCOCO2-208ENST00000506971 RASSF7Q02833 373 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms