RNA–Protein interactions for RNA: ENST00000506960.5

SSBP2-206, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-206ENST00000506960 BNIP3LO60238 219 aa8.05□□□□□ -1.12
SSBP2-206ENST00000506960 GIGYF1O75420 1035 aaPredicted RBP8.05□□□□□ -1.12
SSBP2-206ENST00000506960 ARID1BQ8NFD5 2236 aaPredicted RBP8.05□□□□□ -1.12
SSBP2-206ENST00000506960 ERVK-9P63128 1117 aa8.04□□□□□ -1.12
SSBP2-206ENST00000506960 ESF1Q9H501 851 aaKnown RBP8.04□□□□□ -1.12
SSBP2-206ENST00000506960 GNASQ5JWF2 1037 aa8.03□□□□□ -1.12
SSBP2-206ENST00000506960 TBC1D2BQ9UPU7 963 aa8.03□□□□□ -1.12
SSBP2-206ENST00000506960 APBB1O00213 710 aa8.02□□□□□ -1.13
SSBP2-206ENST00000506960 RUBCNLQ9H714 662 aa8.02□□□□□ -1.13
SSBP2-206ENST00000506960 TRIM28Q13263 835 aaKnown RBP8.01□□□□□ -1.13
SSBP2-206ENST00000506960 FAM182BQ5T319 152 aa8.01□□□□□ -1.13
SSBP2-206ENST00000506960 RNF20Q5VTR2 975 aa8.01□□□□□ -1.13
SSBP2-206ENST00000506960 C9orf172C9J069 976 aa8□□□□□ -1.13
SSBP2-206ENST00000506960 ALAS2P22557 587 aa8□□□□□ -1.13
SSBP2-206ENST00000506960 CRISPLD1Q9H336 500 aa8□□□□□ -1.13
SSBP2-206ENST00000506960 PCDHGC4Q9Y5F7 938 aa8□□□□□ -1.13
SSBP2-206ENST00000506960 MSX1P28360 303 aa7.99□□□□□ -1.13
SSBP2-206ENST00000506960 PHKA2P46019 1235 aa7.99□□□□□ -1.13
SSBP2-206ENST00000506960 IRF5Q13568 498 aa7.99□□□□□ -1.13
SSBP2-206ENST00000506960 ZSCAN10Q96SZ4 725 aaPredicted RBP7.99□□□□□ -1.13
SSBP2-206ENST00000506960 KRTAP4-2Q9BYR5 136 aa7.99□□□□□ -1.13
SSBP2-206ENST00000506960 RNF112Q9ULX5 631 aa7.99□□□□□ -1.13
SSBP2-206ENST00000506960 FCHSD1Q86WN1 690 aa7.98□□□□□ -1.13
SSBP2-206ENST00000506960 ESYT1Q9BSJ8 1104 aa7.98□□□□□ -1.13
SSBP2-206ENST00000506960 ARHGEF10LQ9HCE6 1279 aa7.98□□□□□ -1.13
SSBP2-206ENST00000506960 GNRH1P01148 92 aa7.97□□□□□ -1.13
SSBP2-206ENST00000506960 SCTRP47872 440 aa7.97□□□□□ -1.13
SSBP2-206ENST00000506960 MCCD1P59942 119 aaPredicted RBP7.97□□□□□ -1.13
SSBP2-206ENST00000506960 CENPCQ03188 943 aa7.97□□□□□ -1.13
SSBP2-206ENST00000506960 ZNF330Q9Y3S2 320 aaPredicted RBP7.97□□□□□ -1.13
SSBP2-206ENST00000506960 IRAK1P51617 712 aa7.96□□□□□ -1.14
SSBP2-206ENST00000506960 TMEM214Q6NUQ4 689 aaKnown RBP7.96□□□□□ -1.14
SSBP2-206ENST00000506960 PCDHB11Q9Y5F2 797 aa7.96□□□□□ -1.14
SSBP2-206ENST00000506960 MCM6Q14566 821 aa7.95□□□□□ -1.14
SSBP2-206ENST00000506960 NLRP8Q86W28 1048 aa7.95□□□□□ -1.14
SSBP2-206ENST00000506960 ZNF592Q92610 1267 aa7.95□□□□□ -1.14
SSBP2-206ENST00000506960 CNKSR1Q969H4 720 aa7.95□□□□□ -1.14
SSBP2-206ENST00000506960 GDPD2Q9HCC8 539 aa7.95□□□□□ -1.14
SSBP2-206ENST00000506960 KLF15Q9UIH9 416 aa7.95□□□□□ -1.14
SSBP2-206ENST00000506960 ELOA3CA0A087WX78 387 aaPredicted RBP7.94□□□□□ -1.14
SSBP2-206ENST00000506960 ELOA3DA6NLF2 546 aaPredicted RBP7.94□□□□□ -1.14
SSBP2-206ENST00000506960 LAMC2Q13753 1193 aa7.94□□□□□ -1.14
SSBP2-206ENST00000506960 ELOA3BQ3SY89 546 aa7.94□□□□□ -1.14
SSBP2-206ENST00000506960 ELOA3Q8NG57 546 aa7.94□□□□□ -1.14
SSBP2-206ENST00000506960 CEP126Q9P2H0 1117 aa7.94□□□□□ -1.14
SSBP2-206ENST00000506960 PRR12Q9ULL5 1215 aa7.94□□□□□ -1.14
SSBP2-206ENST00000506960 NRG1Q02297 640 aaPredicted RBP7.93□□□□□ -1.14
SSBP2-206ENST00000506960 ADGRE1Q14246 886 aa7.93□□□□□ -1.14
SSBP2-206ENST00000506960 ZNF468Q5VIY5 522 aaPredicted RBP7.93□□□□□ -1.14
SSBP2-206ENST00000506960 TXNRD3Q86VQ6 643 aa7.93□□□□□ -1.14
SSBP2-206ENST00000506960 C1orf216Q8TAB5 229 aa7.93□□□□□ -1.14
SSBP2-206ENST00000506960 CCDC85AQ96PX6 553 aaPredicted RBP7.93□□□□□ -1.14
SSBP2-206ENST00000506960 ZCCHC2Q9C0B9 1178 aaKnown RBP7.93□□□□□ -1.14
SSBP2-206ENST00000506960 OSBPL3Q9H4L5 887 aa7.93□□□□□ -1.14
SSBP2-206ENST00000506960 PRDM6Q9NQX0 595 aa7.93□□□□□ -1.14
SSBP2-206ENST00000506960 PCMTD2Q9NV79 361 aa7.93□□□□□ -1.14
SSBP2-206ENST00000506960 ATXN7O15265 892 aaPredicted RBP7.92□□□□□ -1.14
SSBP2-206ENST00000506960 TRAK2O60296 914 aa7.92□□□□□ -1.14
SSBP2-206ENST00000506960 ABL2P42684 1182 aa7.92□□□□□ -1.14
SSBP2-206ENST00000506960 VAC14Q08AM6 782 aa7.92□□□□□ -1.14
SSBP2-206ENST00000506960 C4orf17Q53FE4 359 aa7.92□□□□□ -1.14
SSBP2-206ENST00000506960 PRM3Q9NNZ6 103 aa7.92□□□□□ -1.14
SSBP2-206ENST00000506960 RNF114Q9Y508 228 aa7.92□□□□□ -1.14
SSBP2-206ENST00000506960 TP53INP1Q96A56 240 aa7.91□□□□□ -1.14
SSBP2-206ENST00000506960 CDCA7Q9BWT1 371 aaPredicted RBP7.91□□□□□ -1.14
SSBP2-206ENST00000506960 EIF4G2P78344 907 aaKnown RBP eCLIP7.9□□□□□ -1.14
SSBP2-206ENST00000506960 MAPTP10636 758 aaKnown RBP7.89□□□□□ -1.15
SSBP2-206ENST00000506960 PCBP4P57723 403 aaKnown RBP7.89□□□□□ -1.15
SSBP2-206ENST00000506960 MBTPS1Q14703 1052 aa7.89□□□□□ -1.15
SSBP2-206ENST00000506960 GRIK4Q16099 956 aa7.89□□□□□ -1.15
SSBP2-206ENST00000506960 TSGA10IPQ3SY00 556 aa7.89□□□□□ -1.15
SSBP2-206ENST00000506960 TBC1D9Q6ZT07 1266 aa7.89□□□□□ -1.15
SSBP2-206ENST00000506960 SLC51AQ86UW1 340 aa7.89□□□□□ -1.15
SSBP2-206ENST00000506960 PHTF2Q8N3S3 785 aa7.89□□□□□ -1.15
SSBP2-206ENST00000506960 RHBDD1Q8TEB9 315 aa7.89□□□□□ -1.15
SSBP2-206ENST00000506960 FAM229AH3BQW9 127 aa7.88□□□□□ -1.15
SSBP2-206ENST00000506960 IL2RAP01589 272 aa7.88□□□□□ -1.15
SSBP2-206ENST00000506960 TNP2Q05952 138 aa7.88□□□□□ -1.15
SSBP2-206ENST00000506960 XAGE2Q96GT9 111 aa7.88□□□□□ -1.15
SSBP2-206ENST00000506960 RAB6BQ9NRW1 208 aa7.88□□□□□ -1.15
SSBP2-206ENST00000506960 DNAAF2Q9NVR5 837 aaKnown RBP7.88□□□□□ -1.15
SSBP2-206ENST00000506960 CD33P20138 364 aa7.87□□□□□ -1.15
SSBP2-206ENST00000506960 ESCO1Q5FWF5 840 aa7.87□□□□□ -1.15
SSBP2-206ENST00000506960 COG6Q9Y2V7 657 aa7.87□□□□□ -1.15
SSBP2-206ENST00000506960 HRH3Q9Y5N1 445 aa7.87□□□□□ -1.15
SSBP2-206ENST00000506960 M0R082 166 aa7.86□□□□□ -1.15
SSBP2-206ENST00000506960 TAL1P17542 331 aaPredicted RBP7.86□□□□□ -1.15
SSBP2-206ENST00000506960 ZNF417Q8TAU3 575 aa7.86□□□□□ -1.15
SSBP2-206ENST00000506960 LENG1Q96BZ8 264 aaPredicted RBP7.86□□□□□ -1.15
SSBP2-206ENST00000506960 ZNF587Q96SQ5 575 aaPredicted RBP7.86□□□□□ -1.15
SSBP2-206ENST00000506960 FHDC1Q9C0D6 1143 aaPredicted RBP7.86□□□□□ -1.15
SSBP2-206ENST00000506960 DOLKQ9UPQ8 538 aa7.86□□□□□ -1.15
SSBP2-206ENST00000506960 MYCP01106 439 aaPredicted RBP7.85□□□□□ -1.15
SSBP2-206ENST00000506960 WASHC4Q2M389 1173 aa7.85□□□□□ -1.15
SSBP2-206ENST00000506960 SLFNL1Q499Z3 407 aa7.85□□□□□ -1.15
SSBP2-206ENST00000506960 POM121Q96HA1 1249 aa7.85□□□□□ -1.15
SSBP2-206ENST00000506960 CHIC2Q9UKJ5 165 aa7.85□□□□□ -1.15
SSBP2-206ENST00000506960 DCDC2BA2VCK2 349 aa7.84□□□□□ -1.15
SSBP2-206ENST00000506960 KHNYNO15037 678 aaKnown RBP7.84□□□□□ -1.15
SSBP2-206ENST00000506960 PPARGC1BQ86YN6 1023 aaKnown RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms