RNA–Protein interactions for RNA: ENST00000506827.1

ITGA3-209, Transcript of integrin subunit alpha 3, humanhuman

TSL 3

Gene ITGA3, Length 827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-209ENST00000506827 CCDC87Q9NVE4 849 aa18.98■□□□□ 0.63
ITGA3-209ENST00000506827 ZNF831Q5JPB2 1677 aa18.98■□□□□ 0.63
ITGA3-209ENST00000506827 CRKLP46109 303 aaKnown RBP18.97■□□□□ 0.63
ITGA3-209ENST00000506827 DEFB132Q7Z7B7 95 aa18.97■□□□□ 0.63
ITGA3-209ENST00000506827 LINC00116Q8NCU8 138 aa18.97■□□□□ 0.63
ITGA3-209ENST00000506827 DDX21Q9NR30 783 aaKnown RBP eCLIP18.97■□□□□ 0.63
ITGA3-209ENST00000506827 HYPKQ9NX55 129 aa18.97■□□□□ 0.63
ITGA3-209ENST00000506827 TNS1Q9HBL0 1735 aaKnown RBP18.97■□□□□ 0.63
ITGA3-209ENST00000506827 CENPBP07199 599 aaPredicted RBP18.96■□□□□ 0.63
ITGA3-209ENST00000506827 EP400Q96L91 3159 aa18.95■□□□□ 0.62
ITGA3-209ENST00000506827 IL6STP40189 918 aaPredicted RBP18.95■□□□□ 0.62
ITGA3-209ENST00000506827 RARSP54136 660 aaKnown RBP18.95■□□□□ 0.62
ITGA3-209ENST00000506827 KCNQ4P56696 695 aa18.95■□□□□ 0.62
ITGA3-209ENST00000506827 AK7Q96M32 723 aa18.95■□□□□ 0.62
ITGA3-209ENST00000506827 RGPD3A6NKT7 1758 aaPredicted RBP18.95■□□□□ 0.62
ITGA3-209ENST00000506827 RGPD4Q7Z3J3 1758 aa18.95■□□□□ 0.62
ITGA3-209ENST00000506827 CICQ96RK0 1608 aaPredicted RBP18.94■□□□□ 0.62
ITGA3-209ENST00000506827 RPS6KA4O75676 772 aa18.94■□□□□ 0.62
ITGA3-209ENST00000506827 A1BGP04217 495 aa18.94■□□□□ 0.62
ITGA3-209ENST00000506827 SLC4A2P04920 1241 aa18.94■□□□□ 0.62
ITGA3-209ENST00000506827 BRPF1P55201 1214 aaPredicted RBP18.94■□□□□ 0.62
ITGA3-209ENST00000506827 NBPF14Q5TI25 921 aa18.94■□□□□ 0.62
ITGA3-209ENST00000506827 INTS5Q6P9B9 1019 aaKnown RBP18.94■□□□□ 0.62
ITGA3-209ENST00000506827 NECTIN2Q92692 538 aa18.94■□□□□ 0.62
ITGA3-209ENST00000506827 CHPF2Q9P2E5 772 aa18.94■□□□□ 0.62
ITGA3-209ENST00000506827 RCAN3Q9UKA8 241 aa18.94■□□□□ 0.62
ITGA3-209ENST00000506827 RTCBQ9Y3I0 505 aaKnown RBP18.94■□□□□ 0.62
ITGA3-209ENST00000506827 LY75O60449 1722 aa18.94■□□□□ 0.62
ITGA3-209ENST00000506827 A0A087WZG4 1122 aa18.93■□□□□ 0.62
ITGA3-209ENST00000506827 SSH1Q8WYL5 1049 aa18.93■□□□□ 0.62
ITGA3-209ENST00000506827 SMC4Q9NTJ3 1288 aa18.93■□□□□ 0.62
ITGA3-209ENST00000506827 ADRA2BP18089 450 aa18.92■□□□□ 0.62
ITGA3-209ENST00000506827 CANXP27824 592 aaKnown RBP18.92■□□□□ 0.62
ITGA3-209ENST00000506827 PDIA6Q15084 440 aa18.92■□□□□ 0.62
ITGA3-209ENST00000506827 FLAD1Q8NFF5 587 aa18.92■□□□□ 0.62
ITGA3-209ENST00000506827 STK32BQ9NY57 414 aa18.92■□□□□ 0.62
ITGA3-209ENST00000506827 ZBTB1Q9Y2K1 713 aa18.92■□□□□ 0.62
ITGA3-209ENST00000506827 NBPF26B4DH59 902 aa18.91■□□□□ 0.62
ITGA3-209ENST00000506827 GNPATO15228 680 aa18.91■□□□□ 0.62
ITGA3-209ENST00000506827 EIF5P55010 431 aaKnown RBP18.91■□□□□ 0.62
ITGA3-209ENST00000506827 NBPF10Q6P3W6 841 aaKnown RBP18.91■□□□□ 0.62
ITGA3-209ENST00000506827 NBPF15Q8N660 670 aa18.91■□□□□ 0.62
ITGA3-209ENST00000506827 AKT1S1Q96B36 256 aa18.91■□□□□ 0.62
ITGA3-209ENST00000506827 IPO8O15397 1037 aaKnown RBP18.9■□□□□ 0.62
ITGA3-209ENST00000506827 DDX58O95786 925 aaKnown RBP18.9■□□□□ 0.62
ITGA3-209ENST00000506827 MYL6BP14649 208 aa18.9■□□□□ 0.62
ITGA3-209ENST00000506827 SSFA2P28290 1259 aa18.9■□□□□ 0.62
ITGA3-209ENST00000506827 TRAPPC3LQ5T215 181 aa18.9■□□□□ 0.62
ITGA3-209ENST00000506827 MRPL50Q8N5N7 158 aaKnown RBP18.9■□□□□ 0.62
ITGA3-209ENST00000506827 TFCP2L1Q9NZI6 479 aa18.9■□□□□ 0.62
ITGA3-209ENST00000506827 KIF16BQ96L93 1317 aa18.9■□□□□ 0.62
ITGA3-209ENST00000506827 C5P01031 1676 aa18.89■□□□□ 0.61
ITGA3-209ENST00000506827 SLC15A2Q16348 729 aa18.89■□□□□ 0.61
ITGA3-209ENST00000506827 TCERG1O14776 1098 aaKnown RBP18.88■□□□□ 0.61
ITGA3-209ENST00000506827 RGL2O15211 777 aa18.88■□□□□ 0.61
ITGA3-209ENST00000506827 ARHGAP45Q92619 1136 aa18.88■□□□□ 0.61
ITGA3-209ENST00000506827 PTPRCP08575 1304 aa18.88■□□□□ 0.61
ITGA3-209ENST00000506827 TJP1Q07157 1748 aa18.88■□□□□ 0.61
ITGA3-209ENST00000506827 PROSER3Q2NL68 480 aa18.87■□□□□ 0.61
ITGA3-209ENST00000506827 KIF6Q6ZMV9 814 aa18.87■□□□□ 0.61
ITGA3-209ENST00000506827 COPS6Q7L5N1 327 aa18.87■□□□□ 0.61
ITGA3-209ENST00000506827 LRP10Q7Z4F1 713 aa18.87■□□□□ 0.61
ITGA3-209ENST00000506827 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.87■□□□□ 0.61
ITGA3-209ENST00000506827 ZNF330Q9Y3S2 320 aaPredicted RBP18.87■□□□□ 0.61
ITGA3-209ENST00000506827 FLIIQ13045 1269 aa18.86■□□□□ 0.61
ITGA3-209ENST00000506827 XAGE3Q8WTP9 111 aa18.86■□□□□ 0.61
ITGA3-209ENST00000506827 LAMB4A4D0S4 1761 aa18.86■□□□□ 0.61
ITGA3-209ENST00000506827 ERVV-1B6SEH8 477 aa18.85■□□□□ 0.61
ITGA3-209ENST00000506827 BCAR3O75815 825 aa18.85■□□□□ 0.61
ITGA3-209ENST00000506827 ANXA1P04083 346 aa18.85■□□□□ 0.61
ITGA3-209ENST00000506827 RFC4P35249 363 aa18.85■□□□□ 0.61
ITGA3-209ENST00000506827 PIP4K2AP48426 406 aaPredicted RBP18.85■□□□□ 0.61
ITGA3-209ENST00000506827 ZNF827Q17R98 1081 aa18.85■□□□□ 0.61
ITGA3-209ENST00000506827 ANKRD13DQ6ZTN6 518 aa18.85■□□□□ 0.61
ITGA3-209ENST00000506827 ARXQ96QS3 562 aa18.85■□□□□ 0.61
ITGA3-209ENST00000506827 BCL2L13Q9BXK5 485 aa18.85■□□□□ 0.61
ITGA3-209ENST00000506827 C4BP0C0L5 1744 aa18.85■□□□□ 0.61
ITGA3-209ENST00000506827 COL15A1P39059 1388 aa18.84■□□□□ 0.61
ITGA3-209ENST00000506827 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.84■□□□□ 0.61
ITGA3-209ENST00000506827 SOCS7O14512 581 aa18.84■□□□□ 0.61
ITGA3-209ENST00000506827 MS4A1P11836 297 aa18.84■□□□□ 0.61
ITGA3-209ENST00000506827 AIMP1Q12904 312 aaKnown RBP18.84■□□□□ 0.61
ITGA3-209ENST00000506827 FKBP5Q13451 457 aaPredicted RBP18.84■□□□□ 0.61
ITGA3-209ENST00000506827 DZIP3Q86Y13 1208 aaKnown RBP18.84■□□□□ 0.61
ITGA3-209ENST00000506827 PLBD2Q8NHP8 589 aa18.84■□□□□ 0.61
ITGA3-209ENST00000506827 API5Q9BZZ5 524 aaKnown RBP18.84■□□□□ 0.61
ITGA3-209ENST00000506827 PHAXQ9H814 394 aaKnown RBP18.84■□□□□ 0.61
ITGA3-209ENST00000506827 COL5A3P25940 1745 aaPredicted RBP18.83■□□□□ 0.61
ITGA3-209ENST00000506827 ZPR1O75312 459 aa18.83■□□□□ 0.6
ITGA3-209ENST00000506827 ZKSCAN2Q63HK3 967 aa18.83■□□□□ 0.6
ITGA3-209ENST00000506827 KSR2Q6VAB6 950 aa18.83■□□□□ 0.6
ITGA3-209ENST00000506827 ARHGEF1Q92888 912 aaKnown RBP18.83■□□□□ 0.6
ITGA3-209ENST00000506827 NARFQ9UHQ1 456 aa18.83■□□□□ 0.6
ITGA3-209ENST00000506827 NOB1Q9ULX3 412 aaKnown RBP18.83■□□□□ 0.6
ITGA3-209ENST00000506827 ZNF652Q9Y2D9 606 aa18.83■□□□□ 0.6
ITGA3-209ENST00000506827 CLEC4GQ6UXB4 293 aa18.82■□□□□ 0.6
ITGA3-209ENST00000506827 G2E3Q7L622 706 aa18.82■□□□□ 0.6
ITGA3-209ENST00000506827 RIC3Q7Z5B4 369 aa18.82■□□□□ 0.6
ITGA3-209ENST00000506827 FRAT1Q92837 279 aaPredicted RBP18.82■□□□□ 0.6
ITGA3-209ENST00000506827 ANO8Q9HCE9 1232 aaPredicted RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms