RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 ELOA3BQ3SY89 546 aa6.7□□□□□ -1.34
TOPBP1-205ENST00000506779 ELOA3Q8NG57 546 aa6.7□□□□□ -1.34
TOPBP1-205ENST00000506779 PRDM6Q9NQX0 595 aa6.7□□□□□ -1.34
TOPBP1-205ENST00000506779 M0R082 166 aa6.69□□□□□ -1.34
TOPBP1-205ENST00000506779 TRIM66O15016 1216 aa6.69□□□□□ -1.34
TOPBP1-205ENST00000506779 NR6A1Q15406 480 aa6.69□□□□□ -1.34
TOPBP1-205ENST00000506779 C4orf17Q53FE4 359 aa6.69□□□□□ -1.34
TOPBP1-205ENST00000506779 ZNF417Q8TAU3 575 aa6.69□□□□□ -1.34
TOPBP1-205ENST00000506779 LRRN4Q8WUT4 740 aa6.69□□□□□ -1.34
TOPBP1-205ENST00000506779 LENG1Q96BZ8 264 aaPredicted RBP6.69□□□□□ -1.34
TOPBP1-205ENST00000506779 AK7Q96M32 723 aa6.69□□□□□ -1.34
TOPBP1-205ENST00000506779 ZNF587Q96SQ5 575 aaPredicted RBP6.69□□□□□ -1.34
TOPBP1-205ENST00000506779 ZSCAN10Q96SZ4 725 aaPredicted RBP6.69□□□□□ -1.34
TOPBP1-205ENST00000506779 CD97P48960 835 aa6.68□□□□□ -1.34
TOPBP1-205ENST00000506779 GP2P55259 537 aaKnown RBP6.68□□□□□ -1.34
TOPBP1-205ENST00000506779 NRG1Q02297 640 aaPredicted RBP6.68□□□□□ -1.34
TOPBP1-205ENST00000506779 GNASQ5JWF2 1037 aa6.68□□□□□ -1.34
TOPBP1-205ENST00000506779 CNKSR1Q969H4 720 aa6.68□□□□□ -1.34
TOPBP1-205ENST00000506779 ESYT1Q9BSJ8 1104 aa6.68□□□□□ -1.34
TOPBP1-205ENST00000506779 ATXN7O15265 892 aaPredicted RBP6.67□□□□□ -1.34
TOPBP1-205ENST00000506779 GIGYF1O75420 1035 aaPredicted RBP6.67□□□□□ -1.34
TOPBP1-205ENST00000506779 MAPTP10636 758 aaKnown RBP6.67□□□□□ -1.34
TOPBP1-205ENST00000506779 TNP2Q05952 138 aa6.67□□□□□ -1.34
TOPBP1-205ENST00000506779 MDFIQ99750 246 aa6.67□□□□□ -1.34
TOPBP1-205ENST00000506779 KRTAP9-8Q9BYQ0 159 aa6.67□□□□□ -1.34
TOPBP1-205ENST00000506779 RAB6BQ9NRW1 208 aa6.67□□□□□ -1.34
TOPBP1-205ENST00000506779 PRR12Q9ULL5 1215 aa6.67□□□□□ -1.34
TOPBP1-205ENST00000506779 NID1P14543 1247 aa6.66□□□□□ -1.34
TOPBP1-205ENST00000506779 C8orf86Q6ZUL3 223 aa6.66□□□□□ -1.34
TOPBP1-205ENST00000506779 DCDC2BA2VCK2 349 aa6.65□□□□□ -1.34
TOPBP1-205ENST00000506779 IL2RAP01589 272 aa6.65□□□□□ -1.34
TOPBP1-205ENST00000506779 SCTRP47872 440 aa6.65□□□□□ -1.34
TOPBP1-205ENST00000506779 MYSM1Q5VVJ2 828 aa6.65□□□□□ -1.34
TOPBP1-205ENST00000506779 TMEM214Q6NUQ4 689 aaKnown RBP6.65□□□□□ -1.34
TOPBP1-205ENST00000506779 TRAK2O60296 914 aa6.64□□□□□ -1.35
TOPBP1-205ENST00000506779 GTF2E1P29083 439 aaPredicted RBP6.64□□□□□ -1.35
TOPBP1-205ENST00000506779 LCE5AQ5TCM9 118 aa6.64□□□□□ -1.35
TOPBP1-205ENST00000506779 SHISA2Q6UWI4 295 aa6.64□□□□□ -1.35
TOPBP1-205ENST00000506779 NLRP8Q86W28 1048 aa6.64□□□□□ -1.35
TOPBP1-205ENST00000506779 MICALL1Q8N3F8 863 aa6.64□□□□□ -1.35
TOPBP1-205ENST00000506779 OSBPL3Q9H4L5 887 aa6.64□□□□□ -1.35
TOPBP1-205ENST00000506779 STARD13Q9Y3M8 1113 aa6.64□□□□□ -1.35
TOPBP1-205ENST00000506779 HRH3Q9Y5N1 445 aa6.64□□□□□ -1.35
TOPBP1-205ENST00000506779 PDE4DQ08499 809 aa6.63□□□□□ -1.35
TOPBP1-205ENST00000506779 TRAPPC3LQ5T215 181 aa6.63□□□□□ -1.35
TOPBP1-205ENST00000506779 CCDC125Q86Z20 511 aa6.63□□□□□ -1.35
TOPBP1-205ENST00000506779 FHDC1Q9C0D6 1143 aaPredicted RBP6.63□□□□□ -1.35
TOPBP1-205ENST00000506779 KHNYNO15037 678 aaKnown RBP6.62□□□□□ -1.35
TOPBP1-205ENST00000506779 ALBP02768 609 aa6.62□□□□□ -1.35
TOPBP1-205ENST00000506779 MED26O95402 600 aa6.61□□□□□ -1.35
TOPBP1-205ENST00000506779 GNRH1P01148 92 aa6.61□□□□□ -1.35
TOPBP1-205ENST00000506779 C8AP07357 584 aa6.61□□□□□ -1.35
TOPBP1-205ENST00000506779 SLC51AQ86UW1 340 aa6.61□□□□□ -1.35
TOPBP1-205ENST00000506779 A0A0A0MRY4 1105 aa6.6□□□□□ -1.35
TOPBP1-205ENST00000506779 ADARB2-AS1A8MUL3 147 aa6.6□□□□□ -1.35
TOPBP1-205ENST00000506779 OGFOD2Q6N063 350 aa6.6□□□□□ -1.35
TOPBP1-205ENST00000506779 SLC24A3Q9HC58 644 aa6.6□□□□□ -1.35
TOPBP1-205ENST00000506779 USP21Q9UK80 565 aa6.6□□□□□ -1.35
TOPBP1-205ENST00000506779 SYT9Q86SS6 491 aa6.59□□□□□ -1.35
TOPBP1-205ENST00000506779 XAGE2Q96GT9 111 aa6.59□□□□□ -1.35
TOPBP1-205ENST00000506779 KIAA1324LA8MWY0 1029 aaPredicted RBP6.58□□□□□ -1.36
TOPBP1-205ENST00000506779 CLK2P49760 499 aaKnown RBP6.58□□□□□ -1.36
TOPBP1-205ENST00000506779 PRR23CQ6ZRP0 262 aa6.58□□□□□ -1.36
TOPBP1-205ENST00000506779 TBC1D9Q6ZT07 1266 aa6.58□□□□□ -1.36
TOPBP1-205ENST00000506779 KRTAP9-7A8MTY7 169 aa6.57□□□□□ -1.36
TOPBP1-205ENST00000506779 FSTP19883 344 aa6.57□□□□□ -1.36
TOPBP1-205ENST00000506779 ATP4AP20648 1035 aa6.57□□□□□ -1.36
TOPBP1-205ENST00000506779 FBLN7Q53RD9 439 aa6.57□□□□□ -1.36
TOPBP1-205ENST00000506779 RHBDD1Q8TEB9 315 aa6.57□□□□□ -1.36
TOPBP1-205ENST00000506779 ESF1Q9H501 851 aaKnown RBP6.57□□□□□ -1.36
TOPBP1-205ENST00000506779 STRN4Q9NRL3 753 aa6.57□□□□□ -1.36
TOPBP1-205ENST00000506779 ADAMTS4O75173 837 aa6.56□□□□□ -1.36
TOPBP1-205ENST00000506779 SIN3BO75182 1162 aa6.56□□□□□ -1.36
TOPBP1-205ENST00000506779 RAC1P63000 192 aa6.56□□□□□ -1.36
TOPBP1-205ENST00000506779 C1orf216Q8TAB5 229 aa6.56□□□□□ -1.36
TOPBP1-205ENST00000506779 EPS8L1Q8TE68 723 aa6.56□□□□□ -1.36
TOPBP1-205ENST00000506779 MARK1Q9P0L2 795 aa6.56□□□□□ -1.36
TOPBP1-205ENST00000506779 A0A1W2PNR3 127 aa6.55□□□□□ -1.36
TOPBP1-205ENST00000506779 FAM157BP0CG42 384 aa6.55□□□□□ -1.36
TOPBP1-205ENST00000506779 RNF20Q5VTR2 975 aa6.55□□□□□ -1.36
TOPBP1-205ENST00000506779 C20orf204Q6ZNR8 217 aa6.55□□□□□ -1.36
TOPBP1-205ENST00000506779 PPARGC1BQ86YN6 1023 aaKnown RBP6.55□□□□□ -1.36
TOPBP1-205ENST00000506779 PNMA1Q8ND90 353 aa6.55□□□□□ -1.36
TOPBP1-205ENST00000506779 WFDC12Q8WWY7 111 aa6.55□□□□□ -1.36
TOPBP1-205ENST00000506779 RSPH6AQ9H0K4 717 aa6.55□□□□□ -1.36
TOPBP1-205ENST00000506779 PLA2G4AP47712 749 aa6.54□□□□□ -1.36
TOPBP1-205ENST00000506779 POLR3EQ9NVU0 708 aa6.54□□□□□ -1.36
TOPBP1-205ENST00000506779 ATP1B4Q9UN42 357 aaPredicted RBP6.54□□□□□ -1.36
TOPBP1-205ENST00000506779 PCDHB9Q9Y5E1 797 aa6.54□□□□□ -1.36
TOPBP1-205ENST00000506779 PCDHB11Q9Y5F2 797 aa6.54□□□□□ -1.36
TOPBP1-205ENST00000506779 IREB2P48200 963 aaKnown RBP6.53□□□□□ -1.36
TOPBP1-205ENST00000506779 POU5F2Q8N7G0 328 aa6.53□□□□□ -1.36
TOPBP1-205ENST00000506779 ZIC5Q96T25 663 aa6.53□□□□□ -1.36
TOPBP1-205ENST00000506779 TNFRSF25Q93038 417 aa6.52□□□□□ -1.37
TOPBP1-205ENST00000506779 ADGRE2Q9UHX3 823 aa6.52□□□□□ -1.37
TOPBP1-205ENST00000506779 EFSO43281 561 aa6.51□□□□□ -1.37
TOPBP1-205ENST00000506779 LILRB5O75023 590 aa6.51□□□□□ -1.37
TOPBP1-205ENST00000506779 NOS3P29474 1203 aa6.51□□□□□ -1.37
TOPBP1-205ENST00000506779 ARSJQ5FYB0 599 aaPredicted RBP6.51□□□□□ -1.37
TOPBP1-205ENST00000506779 ADH7P40394 386 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms