RNA–Protein interactions for RNA: ENST00000506687.5

CPNE4-207, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-207ENST00000506687 PLCH1Q4KWH8 1693 aa6.79□□□□□ -1.32
CPNE4-207ENST00000506687 ARHGEF10O15013 1369 aa6.79□□□□□ -1.32
CPNE4-207ENST00000506687 EIF3AQ14152 1382 aaKnown RBP6.79□□□□□ -1.32
CPNE4-207ENST00000506687 USP47Q96K76 1375 aa6.79□□□□□ -1.32
CPNE4-207ENST00000506687 QRICH2Q9H0J4 1663 aa6.78□□□□□ -1.32
CPNE4-207ENST00000506687 ANKARQ7Z5J8 1434 aa6.78□□□□□ -1.32
CPNE4-207ENST00000506687 RGPD8O14715 1765 aaPredicted RBP6.78□□□□□ -1.32
CPNE4-207ENST00000506687 TULP4Q9NRJ4 1543 aa6.78□□□□□ -1.32
CPNE4-207ENST00000506687 PALM3A6NDB9 673 aaPredicted RBP6.78□□□□□ -1.32
CPNE4-207ENST00000506687 TMEM88BA6NKF7 163 aa6.78□□□□□ -1.32
CPNE4-207ENST00000506687 MAP3K7O43318 606 aa6.78□□□□□ -1.32
CPNE4-207ENST00000506687 YBX3P16989 372 aaKnown RBP eCLIP6.78□□□□□ -1.32
CPNE4-207ENST00000506687 ZNF710Q8N1W2 664 aa6.78□□□□□ -1.32
CPNE4-207ENST00000506687 NUDT16Q96DE0 195 aaKnown RBP6.78□□□□□ -1.32
CPNE4-207ENST00000506687 PHF12Q96QT6 1004 aa6.78□□□□□ -1.32
CPNE4-207ENST00000506687 KIAA1522Q9P206 1035 aaPredicted RBP6.78□□□□□ -1.32
CPNE4-207ENST00000506687 TNS2Q63HR2 1409 aa6.77□□□□□ -1.33
CPNE4-207ENST00000506687 OATP04181 439 aa6.77□□□□□ -1.33
CPNE4-207ENST00000506687 HSPA5P11021 654 aaKnown RBP6.77□□□□□ -1.33
CPNE4-207ENST00000506687 GNEQ9Y223 722 aaKnown RBP6.77□□□□□ -1.33
CPNE4-207ENST00000506687 SBNO1A3KN83 1393 aa6.77□□□□□ -1.33
CPNE4-207ENST00000506687 ATP7BP35670 1465 aa6.77□□□□□ -1.33
CPNE4-207ENST00000506687 EVC2Q86UK5 1308 aa6.76□□□□□ -1.33
CPNE4-207ENST00000506687 HSPA1AP0DMV8 641 aaKnown RBP6.76□□□□□ -1.33
CPNE4-207ENST00000506687 HSPA1BP0DMV9 641 aaKnown RBP6.76□□□□□ -1.33
CPNE4-207ENST00000506687 POLD1P28340 1107 aa6.76□□□□□ -1.33
CPNE4-207ENST00000506687 EIF4G2P78344 907 aaKnown RBP eCLIP6.76□□□□□ -1.33
CPNE4-207ENST00000506687 WASHC4Q2M389 1173 aa6.76□□□□□ -1.33
CPNE4-207ENST00000506687 SPIRE2Q8WWL2 714 aa6.76□□□□□ -1.33
CPNE4-207ENST00000506687 TFIP11Q9UBB9 837 aaKnown RBP6.76□□□□□ -1.33
CPNE4-207ENST00000506687 POLR3AO14802 1390 aaPredicted RBP6.75□□□□□ -1.33
CPNE4-207ENST00000506687 ATG7O95352 703 aa6.75□□□□□ -1.33
CPNE4-207ENST00000506687 USP17L8P0C7I0 530 aa6.75□□□□□ -1.33
CPNE4-207ENST00000506687 VAC14Q08AM6 782 aa6.75□□□□□ -1.33
CPNE4-207ENST00000506687 QPCTQ16769 361 aa6.75□□□□□ -1.33
CPNE4-207ENST00000506687 NLGN2Q8NFZ4 835 aa6.75□□□□□ -1.33
CPNE4-207ENST00000506687 NDUFB9Q9Y6M9 179 aa6.75□□□□□ -1.33
CPNE4-207ENST00000506687 NRAPQ86VF7 1730 aa6.75□□□□□ -1.33
CPNE4-207ENST00000506687 TOPAZ1Q8N9V7 1692 aa6.74□□□□□ -1.33
CPNE4-207ENST00000506687 SPTLC1O15269 473 aa6.74□□□□□ -1.33
CPNE4-207ENST00000506687 PPM1GO15355 546 aaPredicted RBP6.74□□□□□ -1.33
CPNE4-207ENST00000506687 ZEB1P37275 1124 aaPredicted RBP6.74□□□□□ -1.33
CPNE4-207ENST00000506687 HTRA3P83110 453 aa6.74□□□□□ -1.33
CPNE4-207ENST00000506687 MLLT1Q03111 559 aaPredicted RBP6.74□□□□□ -1.33
CPNE4-207ENST00000506687 TXNRD1Q16881 649 aa6.74□□□□□ -1.33
CPNE4-207ENST00000506687 PMFBP1Q8TBY8 1022 aa6.74□□□□□ -1.33
CPNE4-207ENST00000506687 PXYLP1Q8TE99 480 aa6.74□□□□□ -1.33
CPNE4-207ENST00000506687 CABP1Q9NZU7 370 aa6.74□□□□□ -1.33
CPNE4-207ENST00000506687 TMF1P82094 1093 aa6.73□□□□□ -1.33
CPNE4-207ENST00000506687 TSR1Q2NL82 804 aaKnown RBP6.73□□□□□ -1.33
CPNE4-207ENST00000506687 TUSC1Q2TAM9 212 aa6.73□□□□□ -1.33
CPNE4-207ENST00000506687 RTL5Q5HYW3 569 aaPredicted RBP6.73□□□□□ -1.33
CPNE4-207ENST00000506687 B4GALNT3Q6L9W6 998 aa6.73□□□□□ -1.33
CPNE4-207ENST00000506687 SLC16A10Q8TF71 515 aa6.73□□□□□ -1.33
CPNE4-207ENST00000506687 SLC12A5Q9H2X9 1139 aa6.73□□□□□ -1.33
CPNE4-207ENST00000506687 PRDM11Q9NQV5 511 aa6.73□□□□□ -1.33
CPNE4-207ENST00000506687 STRN4Q9NRL3 753 aa6.73□□□□□ -1.33
CPNE4-207ENST00000506687 KIF1AQ12756 1690 aa6.73□□□□□ -1.33
CPNE4-207ENST00000506687 CPSF1Q10570 1443 aaKnown RBP6.73□□□□□ -1.33
CPNE4-207ENST00000506687 SSH2Q76I76 1423 aa6.73□□□□□ -1.33
CPNE4-207ENST00000506687 ACEP12821 1306 aa6.73□□□□□ -1.33
CPNE4-207ENST00000506687 CD163L1Q9NR16 1453 aa6.73□□□□□ -1.33
CPNE4-207ENST00000506687 FSTL1Q12841 308 aa6.72□□□□□ -1.33
CPNE4-207ENST00000506687 RSBN1LQ6PCB5 846 aaPredicted RBP6.72□□□□□ -1.33
CPNE4-207ENST00000506687 TCP11L2Q8N4U5 519 aa6.72□□□□□ -1.33
CPNE4-207ENST00000506687 RBM46Q8TBY0 533 aaKnown RBP6.72□□□□□ -1.33
CPNE4-207ENST00000506687 ADGRG1Q9Y653 693 aa6.72□□□□□ -1.33
CPNE4-207ENST00000506687 OVOS2A0A0G2JMS6 1433 aa6.72□□□□□ -1.33
CPNE4-207ENST00000506687 OVOS2A0A0J9YW53 1432 aa6.72□□□□□ -1.33
CPNE4-207ENST00000506687 OVOS2Q6IE36 1432 aa6.72□□□□□ -1.33
CPNE4-207ENST00000506687 PPIP5K1Q6PFW1 1433 aa6.72□□□□□ -1.33
CPNE4-207ENST00000506687 COL14A1Q05707 1796 aaKnown RBP6.72□□□□□ -1.33
CPNE4-207ENST00000506687 GOLGB1Q14789 3259 aaKnown RBP6.72□□□□□ -1.33
CPNE4-207ENST00000506687 ITSN1Q15811 1721 aa6.71□□□□□ -1.34
CPNE4-207ENST00000506687 TRPM3Q9HCF6 1732 aaPredicted RBP6.71□□□□□ -1.34
CPNE4-207ENST00000506687 LILRB3O75022 631 aa6.71□□□□□ -1.34
CPNE4-207ENST00000506687 MS4A3Q96HJ5 214 aa6.71□□□□□ -1.34
CPNE4-207ENST00000506687 EPAS1Q99814 870 aa6.71□□□□□ -1.34
CPNE4-207ENST00000506687 ALG2Q9H553 416 aa6.71□□□□□ -1.34
CPNE4-207ENST00000506687 THRAP3Q9Y2W1 955 aaKnown RBP6.71□□□□□ -1.34
CPNE4-207ENST00000506687 RGPD3A6NKT7 1758 aaPredicted RBP6.71□□□□□ -1.34
CPNE4-207ENST00000506687 RGPD4Q7Z3J3 1758 aa6.71□□□□□ -1.34
CPNE4-207ENST00000506687 USP19O94966 1318 aa6.71□□□□□ -1.34
CPNE4-207ENST00000506687 BRD4O60885 1362 aaPredicted RBP6.7□□□□□ -1.34
CPNE4-207ENST00000506687 MOXD2PA6NHM9 499 aa6.7□□□□□ -1.34
CPNE4-207ENST00000506687 TTLL13PA6NNM8 815 aa6.7□□□□□ -1.34
CPNE4-207ENST00000506687 ZNF16P17020 682 aaPredicted RBP6.7□□□□□ -1.34
CPNE4-207ENST00000506687 RGS19P49795 217 aa6.7□□□□□ -1.34
CPNE4-207ENST00000506687 EVA1CP58658 441 aa6.7□□□□□ -1.34
CPNE4-207ENST00000506687 PADI6Q6TGC4 694 aa6.7□□□□□ -1.34
CPNE4-207ENST00000506687 DNAJC14Q6Y2X3 702 aaPredicted RBP6.7□□□□□ -1.34
CPNE4-207ENST00000506687 NUTM1Q86Y26 1132 aa6.7□□□□□ -1.34
CPNE4-207ENST00000506687 NGDNQ8NEJ9 315 aaKnown RBP6.7□□□□□ -1.34
CPNE4-207ENST00000506687 DRC1Q96MC2 740 aa6.7□□□□□ -1.34
CPNE4-207ENST00000506687 UCN2Q96RP3 112 aa6.7□□□□□ -1.34
CPNE4-207ENST00000506687 BCL2L13Q9BXK5 485 aa6.7□□□□□ -1.34
CPNE4-207ENST00000506687 BOLA1Q9Y3E2 137 aa6.7□□□□□ -1.34
CPNE4-207ENST00000506687 PCDHB15Q9Y5E8 787 aa6.7□□□□□ -1.34
CPNE4-207ENST00000506687 AKAP12Q02952 1782 aa6.69□□□□□ -1.34
CPNE4-207ENST00000506687 USP6P35125 1406 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms