RNA–Protein interactions for RNA: ENST00000506312.3

RACK1-213, Transcript of receptor for activated C kinase 1, humanhuman

TSL 5

Gene RACK1, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-213ENST00000506312 SLC4A9Q96Q91 983 aa11.38□□□□□ -0.59
RACK1-213ENST00000506312 ATG3Q9NT62 314 aa11.38□□□□□ -0.59
RACK1-213ENST00000506312 USP42Q9H9J4 1324 aaKnown RBP11.37□□□□□ -0.59
RACK1-213ENST00000506312 EPHX2P34913 555 aa11.37□□□□□ -0.59
RACK1-213ENST00000506312 TAOK3Q9H2K8 898 aa11.37□□□□□ -0.59
RACK1-213ENST00000506312 DDX21Q9NR30 783 aaKnown RBP eCLIP11.37□□□□□ -0.59
RACK1-213ENST00000506312 HACL1Q9UJ83 578 aa11.37□□□□□ -0.59
RACK1-213ENST00000506312 SMG6Q86US8 1419 aaKnown RBP11.36□□□□□ -0.59
RACK1-213ENST00000506312 CA12O43570 354 aa11.36□□□□□ -0.59
RACK1-213ENST00000506312 RRS1Q15050 365 aaKnown RBP11.36□□□□□ -0.59
RACK1-213ENST00000506312 ZNF622Q969S3 477 aaKnown RBP eCLIP11.36□□□□□ -0.59
RACK1-213ENST00000506312 KDRP35968 1356 aa11.36□□□□□ -0.59
RACK1-213ENST00000506312 RNF123Q5XPI4 1314 aa11.35□□□□□ -0.59
RACK1-213ENST00000506312 CNTNAP4Q9C0A0 1308 aa11.35□□□□□ -0.59
RACK1-213ENST00000506312 H0YIN7 160 aa11.35□□□□□ -0.59
RACK1-213ENST00000506312 FXR1P51114 621 aaKnown RBP eCLIP11.35□□□□□ -0.59
RACK1-213ENST00000506312 CIAPIN1Q6FI81 312 aa11.35□□□□□ -0.59
RACK1-213ENST00000506312 HDGFL2Q7Z4V5 671 aaPredicted RBP11.35□□□□□ -0.59
RACK1-213ENST00000506312 L3MBTL3Q96JM7 780 aaPredicted RBP11.35□□□□□ -0.59
RACK1-213ENST00000506312 CUL9Q8IWT3 2517 aa11.35□□□□□ -0.59
RACK1-213ENST00000506312 ZNF541Q9H0D2 1346 aa11.35□□□□□ -0.59
RACK1-213ENST00000506312 CARMIL3Q8ND23 1372 aa11.34□□□□□ -0.59
RACK1-213ENST00000506312 TRAF5O00463 557 aa11.34□□□□□ -0.59
RACK1-213ENST00000506312 MAP2K2P36507 400 aa11.34□□□□□ -0.59
RACK1-213ENST00000506312 RC3H1Q5TC82 1133 aaKnown RBP11.34□□□□□ -0.59
RACK1-213ENST00000506312 SCN4AP35499 1836 aa11.33□□□□□ -0.6
RACK1-213ENST00000506312 USPL1Q5W0Q7 1092 aa11.33□□□□□ -0.6
RACK1-213ENST00000506312 SLC17A8Q8NDX2 589 aa11.33□□□□□ -0.6
RACK1-213ENST00000506312 COG3Q96JB2 828 aa11.33□□□□□ -0.6
RACK1-213ENST00000506312 DLEC1Q9Y238 1755 aa11.33□□□□□ -0.6
RACK1-213ENST00000506312 EDC4Q6P2E9 1401 aaKnown RBP11.33□□□□□ -0.6
RACK1-213ENST00000506312 DICER1Q9UPY3 1922 aaKnown RBP11.33□□□□□ -0.6
RACK1-213ENST00000506312 ADAMTSL1Q8N6G6 1762 aa11.32□□□□□ -0.6
RACK1-213ENST00000506312 TM4SF1P30408 202 aa11.32□□□□□ -0.6
RACK1-213ENST00000506312 CRKLP46109 303 aaKnown RBP11.32□□□□□ -0.6
RACK1-213ENST00000506312 PNMA8AQ86V59 439 aaPredicted RBP11.32□□□□□ -0.6
RACK1-213ENST00000506312 COL5A3P25940 1745 aaPredicted RBP11.32□□□□□ -0.6
RACK1-213ENST00000506312 ZPR1O75312 459 aa11.31□□□□□ -0.6
RACK1-213ENST00000506312 BRPF1P55201 1214 aaPredicted RBP11.31□□□□□ -0.6
RACK1-213ENST00000506312 NFIXQ14938 502 aa11.31□□□□□ -0.6
RACK1-213ENST00000506312 CCDC24Q8N4L8 307 aa11.31□□□□□ -0.6
RACK1-213ENST00000506312 SLC12A5Q9H2X9 1139 aa11.31□□□□□ -0.6
RACK1-213ENST00000506312 TLL2Q9Y6L7 1015 aa11.31□□□□□ -0.6
RACK1-213ENST00000506312 A0A1W2PP64 1363 aa11.3□□□□□ -0.6
RACK1-213ENST00000506312 PTCD1O75127 700 aaKnown RBP11.3□□□□□ -0.6
RACK1-213ENST00000506312 SERPINB2P05120 415 aa11.3□□□□□ -0.6
RACK1-213ENST00000506312 NKX1-1Q15270 411 aaPredicted RBP11.3□□□□□ -0.6
RACK1-213ENST00000506312 CST9Q5W186 159 aa11.3□□□□□ -0.6
RACK1-213ENST00000506312 BICDL1Q6ZP65 573 aa11.3□□□□□ -0.6
RACK1-213ENST00000506312 SPG7Q9UQ90 795 aa11.3□□□□□ -0.6
RACK1-213ENST00000506312 MYH14Q7Z406 1995 aaKnown RBP11.3□□□□□ -0.6
RACK1-213ENST00000506312 RTL1A6NKG5 1358 aa11.29□□□□□ -0.6
RACK1-213ENST00000506312 HSP90AB2PQ58FF8 381 aa11.29□□□□□ -0.6
RACK1-213ENST00000506312 ZIC5Q96T25 663 aa11.29□□□□□ -0.6
RACK1-213ENST00000506312 AFDNP55196 1824 aaKnown RBP11.29□□□□□ -0.6
RACK1-213ENST00000506312 FER1L6Q2WGJ9 1857 aa11.29□□□□□ -0.6
RACK1-213ENST00000506312 ZNF408Q9H9D4 720 aa11.28□□□□□ -0.6
RACK1-213ENST00000506312 HPS5Q9UPZ3 1129 aa11.28□□□□□ -0.6
RACK1-213ENST00000506312 LTBP3Q9NS15 1303 aa11.28□□□□□ -0.6
RACK1-213ENST00000506312 ZNF277Q9NRM2 450 aaPredicted RBP11.27□□□□□ -0.61
RACK1-213ENST00000506312 TERF2IPQ9NYB0 399 aa11.27□□□□□ -0.61
RACK1-213ENST00000506312 CELF2O95319 508 aaKnown RBP11.26□□□□□ -0.61
RACK1-213ENST00000506312 PHKG2P15735 406 aa11.26□□□□□ -0.61
RACK1-213ENST00000506312 SAPCD2Q86UD0 394 aa11.26□□□□□ -0.61
RACK1-213ENST00000506312 GJA3Q9Y6H8 435 aa11.26□□□□□ -0.61
RACK1-213ENST00000506312 PRPF40BQ6NWY9 871 aaKnown RBP11.25□□□□□ -0.61
RACK1-213ENST00000506312 CTU1Q7Z7A3 348 aaKnown RBP11.25□□□□□ -0.61
RACK1-213ENST00000506312 IFNL2Q8IZJ0 200 aa11.25□□□□□ -0.61
RACK1-213ENST00000506312 COL11A2P13942 1736 aaPredicted RBP11.25□□□□□ -0.61
RACK1-213ENST00000506312 TRPA1O75762 1119 aa11.24□□□□□ -0.61
RACK1-213ENST00000506312 LMOD1P29536 600 aaPredicted RBP11.24□□□□□ -0.61
RACK1-213ENST00000506312 CACNA1SQ13698 1873 aa11.23□□□□□ -0.61
RACK1-213ENST00000506312 INTS5Q6P9B9 1019 aaKnown RBP11.23□□□□□ -0.61
RACK1-213ENST00000506312 INSRP06213 1382 aa11.23□□□□□ -0.61
RACK1-213ENST00000506312 RAB3GAP2Q9H2M9 1393 aa11.23□□□□□ -0.61
RACK1-213ENST00000506312 ADAMTS7Q9UKP4 1686 aa11.23□□□□□ -0.61
RACK1-213ENST00000506312 NRXN2Q9P2S2 1712 aa11.23□□□□□ -0.61
RACK1-213ENST00000506312 PDE6BP35913 854 aa11.22□□□□□ -0.61
RACK1-213ENST00000506312 EPS15P42566 896 aa11.22□□□□□ -0.61
RACK1-213ENST00000506312 NOGQ13253 232 aa11.22□□□□□ -0.61
RACK1-213ENST00000506312 ZNF831Q5JPB2 1677 aa11.22□□□□□ -0.61
RACK1-213ENST00000506312 OLFM4Q6UX06 510 aa11.22□□□□□ -0.61
RACK1-213ENST00000506312 SYNE4Q8N205 404 aa11.22□□□□□ -0.61
RACK1-213ENST00000506312 GGNBP2Q9H3C7 697 aa11.22□□□□□ -0.61
RACK1-213ENST00000506312 COLQQ9Y215 455 aaPredicted RBP11.22□□□□□ -0.61
RACK1-213ENST00000506312 TRIOBPQ9H2D6 2365 aa11.21□□□□□ -0.61
RACK1-213ENST00000506312 TRPM7Q96QT4 1865 aa11.21□□□□□ -0.61
RACK1-213ENST00000506312 SLX4Q8IY92 1834 aa11.21□□□□□ -0.61
RACK1-213ENST00000506312 FLT4P35916 1363 aa11.21□□□□□ -0.61
RACK1-213ENST00000506312 NPHP1O15259 732 aa11.21□□□□□ -0.61
RACK1-213ENST00000506312 CABP4P57796 275 aa11.21□□□□□ -0.61
RACK1-213ENST00000506312 AKAP4Q5JQC9 854 aa11.21□□□□□ -0.61
RACK1-213ENST00000506312 SOGA3Q5TF21 947 aa11.21□□□□□ -0.61
RACK1-213ENST00000506312 BCL2L12Q9HB09 334 aa11.21□□□□□ -0.61
RACK1-213ENST00000506312 ANKRD31Q8N7Z5 1873 aa11.21□□□□□ -0.62
RACK1-213ENST00000506312 COL15A1P39059 1388 aa11.2□□□□□ -0.62
RACK1-213ENST00000506312 SOS1Q07889 1333 aaPredicted RBP11.2□□□□□ -0.62
RACK1-213ENST00000506312 PPM1GO15355 546 aaPredicted RBP11.2□□□□□ -0.62
RACK1-213ENST00000506312 CCDC93Q567U6 631 aa11.2□□□□□ -0.62
RACK1-213ENST00000506312 GPC2Q8N158 579 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms