RNA–Protein interactions for RNA: ENST00000506223.1

SMAD5-201, Transcript of SMAD family member 5, humanhuman

TSL 4

Gene SMAD5, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-201ENST00000506223 SF3B2Q13435 895 aaKnown RBP9.56□□□□□ -0.88
SMAD5-201ENST00000506223 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.56□□□□□ -0.88
SMAD5-201ENST00000506223 ADGRL3Q9HAR2 1447 aa9.56□□□□□ -0.88
SMAD5-201ENST00000506223 COPS2P61201 443 aa9.55□□□□□ -0.88
SMAD5-201ENST00000506223 NYAP1Q6ZVC0 841 aa9.55□□□□□ -0.88
SMAD5-201ENST00000506223 RPRD2Q5VT52 1461 aaKnown RBP9.54□□□□□ -0.88
SMAD5-201ENST00000506223 LYPD8Q6UX82 237 aa9.54□□□□□ -0.88
SMAD5-201ENST00000506223 CCDC82Q8N4S0 544 aa9.54□□□□□ -0.88
SMAD5-201ENST00000506223 EPS8L1Q8TE68 723 aa9.54□□□□□ -0.88
SMAD5-201ENST00000506223 GPR37L1O60883 481 aa9.53□□□□□ -0.88
SMAD5-201ENST00000506223 NR6A1Q15406 480 aa9.53□□□□□ -0.88
SMAD5-201ENST00000506223 HOMEZQ8IX15 550 aa9.53□□□□□ -0.88
SMAD5-201ENST00000506223 ORAI2Q96SN7 254 aa9.53□□□□□ -0.88
SMAD5-201ENST00000506223 JUNDP17535 347 aa9.52□□□□□ -0.89
SMAD5-201ENST00000506223 PTPN5P54829 565 aa9.52□□□□□ -0.89
SMAD5-201ENST00000506223 IRF5Q13568 498 aa9.52□□□□□ -0.89
SMAD5-201ENST00000506223 R3HDM1Q15032 1099 aaKnown RBP9.52□□□□□ -0.89
SMAD5-201ENST00000506223 SEPT12Q8IYM1 358 aa9.52□□□□□ -0.89
SMAD5-201ENST00000506223 SPSB2Q99619 263 aa9.52□□□□□ -0.89
SMAD5-201ENST00000506223 METP08581 1390 aa9.51□□□□□ -0.89
SMAD5-201ENST00000506223 ANKRD50Q9ULJ7 1429 aa9.51□□□□□ -0.89
SMAD5-201ENST00000506223 MSS51Q4VC12 460 aa9.51□□□□□ -0.89
SMAD5-201ENST00000506223 E9PCH4 1651 aa9.51□□□□□ -0.89
SMAD5-201ENST00000506223 SLIT2O94813 1529 aa9.51□□□□□ -0.89
SMAD5-201ENST00000506223 BAG6P46379 1132 aa9.5□□□□□ -0.89
SMAD5-201ENST00000506223 PTPRNQ16849 979 aa9.5□□□□□ -0.89
SMAD5-201ENST00000506223 UNC5CLQ8IV45 518 aa9.5□□□□□ -0.89
SMAD5-201ENST00000506223 FAM160A2Q8N612 972 aaPredicted RBP9.5□□□□□ -0.89
SMAD5-201ENST00000506223 MTRQ99707 1265 aa9.5□□□□□ -0.89
SMAD5-201ENST00000506223 PLSCR2Q9NRY7 297 aa9.5□□□□□ -0.89
SMAD5-201ENST00000506223 ADGRL2O95490 1459 aa9.5□□□□□ -0.89
SMAD5-201ENST00000506223 RGPD1P0DJD0 1748 aa9.5□□□□□ -0.89
SMAD5-201ENST00000506223 CAMTA1Q9Y6Y1 1673 aa9.49□□□□□ -0.89
SMAD5-201ENST00000506223 PXDNQ92626 1479 aa9.49□□□□□ -0.89
SMAD5-201ENST00000506223 TNS1Q9HBL0 1735 aaKnown RBP9.49□□□□□ -0.89
SMAD5-201ENST00000506223 POM121CA8CG34 1229 aa9.49□□□□□ -0.89
SMAD5-201ENST00000506223 TLL1O43897 1013 aa9.49□□□□□ -0.89
SMAD5-201ENST00000506223 ZPR1O75312 459 aa9.49□□□□□ -0.89
SMAD5-201ENST00000506223 PLCH1Q4KWH8 1693 aa9.48□□□□□ -0.89
SMAD5-201ENST00000506223 WASHC4Q2M389 1173 aa9.48□□□□□ -0.89
SMAD5-201ENST00000506223 KRT27Q7Z3Y8 459 aa9.48□□□□□ -0.89
SMAD5-201ENST00000506223 CCDC97Q96F63 343 aaPredicted RBP9.48□□□□□ -0.89
SMAD5-201ENST00000506223 IQGAP3Q86VI3 1631 aa9.47□□□□□ -0.89
SMAD5-201ENST00000506223 USP32Q8NFA0 1604 aa9.47□□□□□ -0.89
SMAD5-201ENST00000506223 SENP3-EIF4A1A0A087X0R7 540 aa9.47□□□□□ -0.89
SMAD5-201ENST00000506223 DXOO77932 396 aaKnown RBP9.47□□□□□ -0.89
SMAD5-201ENST00000506223 ADH1BP00325 375 aa9.47□□□□□ -0.89
SMAD5-201ENST00000506223 F12P00748 615 aaPredicted RBP9.47□□□□□ -0.89
SMAD5-201ENST00000506223 XPCQ01831 940 aaPredicted RBP9.47□□□□□ -0.89
SMAD5-201ENST00000506223 PNMA1Q8ND90 353 aa9.47□□□□□ -0.89
SMAD5-201ENST00000506223 PRDM9Q9NQV7 894 aa9.47□□□□□ -0.89
SMAD5-201ENST00000506223 TJAP1Q5JTD0 557 aa9.46□□□□□ -0.9
SMAD5-201ENST00000506223 GLMNQ92990 594 aa9.46□□□□□ -0.9
SMAD5-201ENST00000506223 MAP10Q9P2G4 905 aa9.46□□□□□ -0.9
SMAD5-201ENST00000506223 SERPINA10Q9UK55 444 aa9.46□□□□□ -0.9
SMAD5-201ENST00000506223 ROCK1Q13464 1354 aa9.46□□□□□ -0.9
SMAD5-201ENST00000506223 NWD2Q9ULI1 1742 aa9.45□□□□□ -0.9
SMAD5-201ENST00000506223 MMP16P51512 607 aa9.45□□□□□ -0.9
SMAD5-201ENST00000506223 VAC14Q08AM6 782 aa9.45□□□□□ -0.9
SMAD5-201ENST00000506223 CALR3Q96L12 384 aaKnown RBP9.45□□□□□ -0.9
SMAD5-201ENST00000506223 IL21Q9HBE4 155 aa9.45□□□□□ -0.9
SMAD5-201ENST00000506223 CCNYL3P0C7X3 344 aa9.44□□□□□ -0.9
SMAD5-201ENST00000506223 CTHP32929 405 aa9.44□□□□□ -0.9
SMAD5-201ENST00000506223 VPS72Q15906 364 aa9.44□□□□□ -0.9
SMAD5-201ENST00000506223 EZH2Q15910 746 aaKnown RBP9.44□□□□□ -0.9
SMAD5-201ENST00000506223 FAM182BQ5T319 152 aa9.44□□□□□ -0.9
SMAD5-201ENST00000506223 ZNF516Q92618 1163 aa9.44□□□□□ -0.9
SMAD5-201ENST00000506223 NUDT12Q9BQG2 462 aa9.44□□□□□ -0.9
SMAD5-201ENST00000506223 CEP350Q5VT06 3117 aa9.43□□□□□ -0.9
SMAD5-201ENST00000506223 NUP155O75694 1391 aa9.43□□□□□ -0.9
SMAD5-201ENST00000506223 ROBO2Q9HCK4 1378 aa9.43□□□□□ -0.9
SMAD5-201ENST00000506223 NPHP3Q7Z494 1330 aa9.43□□□□□ -0.9
SMAD5-201ENST00000506223 ZNF784Q8NCA9 323 aaPredicted RBP9.43□□□□□ -0.9
SMAD5-201ENST00000506223 FKBPLQ9UIM3 349 aa9.43□□□□□ -0.9
SMAD5-201ENST00000506223 NUP188Q5SRE5 1749 aa9.42□□□□□ -0.9
SMAD5-201ENST00000506223 ABCA3Q99758 1704 aa9.42□□□□□ -0.9
SMAD5-201ENST00000506223 DISP2A7MBM2 1401 aa9.42□□□□□ -0.9
SMAD5-201ENST00000506223 FOXO3O43524 673 aa9.42□□□□□ -0.9
SMAD5-201ENST00000506223 EVA1BQ9NVM1 165 aa9.42□□□□□ -0.9
SMAD5-201ENST00000506223 CCDC9Q9Y3X0 531 aaKnown RBP9.42□□□□□ -0.9
SMAD5-201ENST00000506223 UTRNP46939 3433 aa9.42□□□□□ -0.9
SMAD5-201ENST00000506223 NRAPQ86VF7 1730 aa9.42□□□□□ -0.9
SMAD5-201ENST00000506223 RREB1Q92766 1687 aa9.42□□□□□ -0.9
SMAD5-201ENST00000506223 A0A0G2JS52 829 aa9.41□□□□□ -0.9
SMAD5-201ENST00000506223 MYT1Q01538 1121 aa9.41□□□□□ -0.9
SMAD5-201ENST00000506223 ESCO1Q5FWF5 840 aa9.41□□□□□ -0.9
SMAD5-201ENST00000506223 HDGFL1Q5TGJ6 251 aa9.41□□□□□ -0.9
SMAD5-201ENST00000506223 ADAMTS19Q8TE59 1207 aa9.41□□□□□ -0.9
SMAD5-201ENST00000506223 SLC6A16Q9GZN6 736 aa9.41□□□□□ -0.9
SMAD5-201ENST00000506223 CHD4Q14839 1912 aa9.41□□□□□ -0.9
SMAD5-201ENST00000506223 ZC3H4Q9UPT8 1303 aaKnown RBP9.4□□□□□ -0.9
SMAD5-201ENST00000506223 KCNH2Q12809 1159 aa9.4□□□□□ -0.9
SMAD5-201ENST00000506223 NEXMIFQ5QGS0 1516 aa9.4□□□□□ -0.91
SMAD5-201ENST00000506223 RRBP1Q9P2E9 1410 aaKnown RBP9.39□□□□□ -0.91
SMAD5-201ENST00000506223 CDC42BPGQ6DT37 1551 aa9.39□□□□□ -0.91
SMAD5-201ENST00000506223 C1QTNF8P60827 252 aa9.39□□□□□ -0.91
SMAD5-201ENST00000506223 CAMKK2Q96RR4 588 aa9.39□□□□□ -0.91
SMAD5-201ENST00000506223 NINLQ9Y2I6 1382 aa9.38□□□□□ -0.91
SMAD5-201ENST00000506223 ADGRB2O60241 1585 aa9.38□□□□□ -0.91
SMAD5-201ENST00000506223 SPATA31A3Q5VYP0 1347 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms