RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 PXDNLA1KZ92 1463 aa22.41■■□□□ 1.18
PDLIM7-215ENST00000506161 C10orf71Q711Q0 1435 aa22.4■■□□□ 1.18
PDLIM7-215ENST00000506161 RFC4P35249 363 aa22.4■■□□□ 1.18
PDLIM7-215ENST00000506161 FKBP8Q14318 412 aa22.4■■□□□ 1.18
PDLIM7-215ENST00000506161 MCM10Q7L590 875 aa22.4■■□□□ 1.18
PDLIM7-215ENST00000506161 NUDCQ9Y266 331 aa22.4■■□□□ 1.18
PDLIM7-215ENST00000506161 DDR1Q08345 913 aa22.39■■□□□ 1.17
PDLIM7-215ENST00000506161 NRXN2Q9P2S2 1712 aa22.38■■□□□ 1.17
PDLIM7-215ENST00000506161 FCHSD2O94868 740 aa22.38■■□□□ 1.17
PDLIM7-215ENST00000506161 TEFQ10587 303 aa22.38■■□□□ 1.17
PDLIM7-215ENST00000506161 ZNF790Q6PG37 636 aa22.38■■□□□ 1.17
PDLIM7-215ENST00000506161 KDM3BQ7LBC6 1761 aa22.38■■□□□ 1.17
PDLIM7-215ENST00000506161 HEG1Q9ULI3 1381 aa22.38■■□□□ 1.17
PDLIM7-215ENST00000506161 SCN7AQ01118 1682 aa22.37■■□□□ 1.17
PDLIM7-215ENST00000506161 NLGN1Q8N2Q7 840 aa22.37■■□□□ 1.17
PDLIM7-215ENST00000506161 PLEKHF1Q96S99 279 aa22.37■■□□□ 1.17
PDLIM7-215ENST00000506161 BCL2L12Q9HB09 334 aa22.37■■□□□ 1.17
PDLIM7-215ENST00000506161 COL15A1P39059 1388 aa22.37■■□□□ 1.17
PDLIM7-215ENST00000506161 PRAMEF22A3QJZ6 481 aa22.36■■□□□ 1.17
PDLIM7-215ENST00000506161 USPL1Q5W0Q7 1092 aa22.35■■□□□ 1.17
PDLIM7-215ENST00000506161 VSIG10Q8N0Z9 540 aa22.35■■□□□ 1.17
PDLIM7-215ENST00000506161 BCORQ6W2J9 1755 aa22.35■■□□□ 1.17
PDLIM7-215ENST00000506161 KIF3CO14782 793 aa22.34■■□□□ 1.17
PDLIM7-215ENST00000506161 APLP1P51693 650 aa22.34■■□□□ 1.17
PDLIM7-215ENST00000506161 CANXP27824 592 aaKnown RBP22.33■■□□□ 1.17
PDLIM7-215ENST00000506161 TTC5Q8N0Z6 440 aa22.33■■□□□ 1.17
PDLIM7-215ENST00000506161 BTBD11A6QL63 1104 aa22.32■■□□□ 1.16
PDLIM7-215ENST00000506161 TM4SF1P30408 202 aa22.32■■□□□ 1.16
PDLIM7-215ENST00000506161 LAMB4A4D0S4 1761 aa22.32■■□□□ 1.16
PDLIM7-215ENST00000506161 ANKRD31Q8N7Z5 1873 aa22.32■■□□□ 1.16
PDLIM7-215ENST00000506161 ARFGEF1Q9Y6D6 1849 aa22.31■■□□□ 1.16
PDLIM7-215ENST00000506161 A0A0G2JLW4 131 aa22.31■■□□□ 1.16
PDLIM7-215ENST00000506161 PIP4K2AP48426 406 aaPredicted RBP22.31■■□□□ 1.16
PDLIM7-215ENST00000506161 POLRMTO00411 1230 aaKnown RBP22.3■■□□□ 1.16
PDLIM7-215ENST00000506161 A1BGP04217 495 aa22.3■■□□□ 1.16
PDLIM7-215ENST00000506161 THUMPD2Q9BTF0 503 aaKnown RBP22.3■■□□□ 1.16
PDLIM7-215ENST00000506161 MIS18AQ9NYP9 233 aa22.3■■□□□ 1.16
PDLIM7-215ENST00000506161 USP16Q9Y5T5 823 aa22.3■■□□□ 1.16
PDLIM7-215ENST00000506161 DPEP1P16444 411 aa22.29■■□□□ 1.16
PDLIM7-215ENST00000506161 KCNA3P22001 575 aa22.29■■□□□ 1.16
PDLIM7-215ENST00000506161 EIF5P55010 431 aaKnown RBP22.29■■□□□ 1.16
PDLIM7-215ENST00000506161 NARFQ9UHQ1 456 aa22.29■■□□□ 1.16
PDLIM7-215ENST00000506161 PARP3Q9Y6F1 533 aa22.29■■□□□ 1.16
PDLIM7-215ENST00000506161 DLEC1Q9Y238 1755 aa22.29■■□□□ 1.16
PDLIM7-215ENST00000506161 NFIXQ14938 502 aa22.28■■□□□ 1.16
PDLIM7-215ENST00000506161 RALBP1Q15311 655 aa22.27■■□□□ 1.16
PDLIM7-215ENST00000506161 FMNL2Q96PY5 1086 aa22.27■■□□□ 1.16
PDLIM7-215ENST00000506161 CARMIL3Q8ND23 1372 aa22.26■■□□□ 1.15
PDLIM7-215ENST00000506161 DNAJC5GQ8N7S2 189 aa22.26■■□□□ 1.15
PDLIM7-215ENST00000506161 ZPR1O75312 459 aa22.25■■□□□ 1.15
PDLIM7-215ENST00000506161 RTF1Q92541 710 aaKnown RBP22.25■■□□□ 1.15
PDLIM7-215ENST00000506161 COL11A2P13942 1736 aaPredicted RBP22.25■■□□□ 1.15
PDLIM7-215ENST00000506161 HTATSF1O43719 755 aaKnown RBP22.24■■□□□ 1.15
PDLIM7-215ENST00000506161 TOMM70O94826 608 aa22.24■■□□□ 1.15
PDLIM7-215ENST00000506161 STARD3NLO95772 234 aa22.24■■□□□ 1.15
PDLIM7-215ENST00000506161 TGFB2P61812 414 aa22.24■■□□□ 1.15
PDLIM7-215ENST00000506161 NFE2L2Q16236 605 aa22.24■■□□□ 1.15
PDLIM7-215ENST00000506161 TBC1D2BQ9UPU7 963 aa22.24■■□□□ 1.15
PDLIM7-215ENST00000506161 MYBBP1AQ9BQG0 1328 aaKnown RBP22.24■■□□□ 1.15
PDLIM7-215ENST00000506161 CHRNA5P30532 468 aa22.23■■□□□ 1.15
PDLIM7-215ENST00000506161 ZNF330Q9Y3S2 320 aaPredicted RBP22.23■■□□□ 1.15
PDLIM7-215ENST00000506161 NBPF26B4DH59 902 aa22.22■■□□□ 1.15
PDLIM7-215ENST00000506161 TBC1D9BQ66K14 1250 aa22.22■■□□□ 1.15
PDLIM7-215ENST00000506161 NBPF10Q6P3W6 841 aaKnown RBP22.22■■□□□ 1.15
PDLIM7-215ENST00000506161 NBPF15Q8N660 670 aa22.22■■□□□ 1.15
PDLIM7-215ENST00000506161 CACNA1SQ13698 1873 aa22.22■■□□□ 1.15
PDLIM7-215ENST00000506161 TAF7Q15545 349 aaPredicted RBP22.21■■□□□ 1.15
PDLIM7-215ENST00000506161 BICDL1Q6ZP65 573 aa22.21■■□□□ 1.15
PDLIM7-215ENST00000506161 BCS1LQ9Y276 419 aa22.21■■□□□ 1.15
PDLIM7-215ENST00000506161 SBF1O95248 1867 aa22.21■■□□□ 1.15
PDLIM7-215ENST00000506161 IL6STP40189 918 aaPredicted RBP22.2■■□□□ 1.14
PDLIM7-215ENST00000506161 TEX13AQ9BXU3 409 aaPredicted RBP22.2■■□□□ 1.14
PDLIM7-215ENST00000506161 CAMTA2O94983 1202 aa22.19■■□□□ 1.14
PDLIM7-215ENST00000506161 SERPINB2P05120 415 aa22.19■■□□□ 1.14
PDLIM7-215ENST00000506161 CCDC146Q8IYE0 955 aa22.19■■□□□ 1.14
PDLIM7-215ENST00000506161 CCDC24Q8N4L8 307 aa22.18■■□□□ 1.14
PDLIM7-215ENST00000506161 SNRPA1P09661 255 aaKnown RBP22.17■■□□□ 1.14
PDLIM7-215ENST00000506161 PRKRIP1Q9H875 184 aaPredicted RBP22.17■■□□□ 1.14
PDLIM7-215ENST00000506161 RRP7AQ9Y3A4 280 aaKnown RBP22.17■■□□□ 1.14
PDLIM7-215ENST00000506161 CCDC88AQ3V6T2 1871 aa22.17■■□□□ 1.14
PDLIM7-215ENST00000506161 NUP98P52948 1817 aa22.17■■□□□ 1.14
PDLIM7-215ENST00000506161 MAPK8IP3Q9UPT6 1336 aa22.15■■□□□ 1.14
PDLIM7-215ENST00000506161 EIF4A1P60842 406 aaKnown RBP22.15■■□□□ 1.14
PDLIM7-215ENST00000506161 COL13A1Q5TAT6 717 aaPredicted RBP22.15■■□□□ 1.14
PDLIM7-215ENST00000506161 A0A087WZG4 1122 aa22.14■■□□□ 1.13
PDLIM7-215ENST00000506161 TMPOP42166 694 aaKnown RBP22.14■■□□□ 1.13
PDLIM7-215ENST00000506161 DZIP3Q86Y13 1208 aaKnown RBP22.14■■□□□ 1.13
PDLIM7-215ENST00000506161 CAPN15O75808 1086 aa22.13■■□□□ 1.13
PDLIM7-215ENST00000506161 RIPK4P57078 832 aa22.13■■□□□ 1.13
PDLIM7-215ENST00000506161 NMRK2Q9NPI5 230 aa22.13■■□□□ 1.13
PDLIM7-215ENST00000506161 NEFMP07197 916 aa22.12■■□□□ 1.13
PDLIM7-215ENST00000506161 PRR5LQ6MZQ0 368 aa22.12■■□□□ 1.13
PDLIM7-215ENST00000506161 KLRG1Q96E93 195 aa22.12■■□□□ 1.13
PDLIM7-215ENST00000506161 CCDC184Q52MB2 194 aa22.11■■□□□ 1.13
PDLIM7-215ENST00000506161 RBM46Q8TBY0 533 aaKnown RBP22.11■■□□□ 1.13
PDLIM7-215ENST00000506161 PIM2Q9P1W9 311 aa22.11■■□□□ 1.13
PDLIM7-215ENST00000506161 ADAMTS8Q9UP79 889 aa22.11■■□□□ 1.13
PDLIM7-215ENST00000506161 WDR90Q96KV7 1748 aa22.11■■□□□ 1.13
PDLIM7-215ENST00000506161 TNRC6CQ9HCJ0 1690 aaKnown RBP22.11■■□□□ 1.13
PDLIM7-215ENST00000506161 SLX4Q8IY92 1834 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms