RNA–Protein interactions for RNA: ENST00000505964.1

SGCA-205, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-205ENST00000505964 CYP27B1O15528 508 aa14.68□□□□□ -0.06
SGCA-205ENST00000505964 RNMTO43148 476 aaKnown RBP14.68□□□□□ -0.06
SGCA-205ENST00000505964 PHF14O94880 888 aa14.68□□□□□ -0.06
SGCA-205ENST00000505964 CT47B1P0C2W7 299 aaPredicted RBP14.68□□□□□ -0.06
SGCA-205ENST00000505964 NKX1-1Q15270 411 aaPredicted RBP14.68□□□□□ -0.06
SGCA-205ENST00000505964 PALLDQ8WX93 1383 aa14.68□□□□□ -0.06
SGCA-205ENST00000505964 KDM6AO15550 1401 aaPredicted RBP14.67□□□□□ -0.06
SGCA-205ENST00000505964 MPRIPQ6WCQ1 1025 aa14.67□□□□□ -0.06
SGCA-205ENST00000505964 DCAF5Q96JK2 942 aa14.67□□□□□ -0.06
SGCA-205ENST00000505964 CACNA1FO60840 1977 aa14.66□□□□□ -0.06
SGCA-205ENST00000505964 TAF7Q15545 349 aaPredicted RBP14.66□□□□□ -0.06
SGCA-205ENST00000505964 TSR2Q969E8 191 aaKnown RBP14.66□□□□□ -0.06
SGCA-205ENST00000505964 LGR6Q9HBX8 967 aa14.66□□□□□ -0.06
SGCA-205ENST00000505964 MBIPQ9NS73 344 aa14.66□□□□□ -0.06
SGCA-205ENST00000505964 LAS1LQ9Y4W2 734 aaKnown RBP14.66□□□□□ -0.06
SGCA-205ENST00000505964 KIF3CO14782 793 aa14.65□□□□□ -0.06
SGCA-205ENST00000505964 TEFQ10587 303 aa14.65□□□□□ -0.06
SGCA-205ENST00000505964 AK7Q96M32 723 aa14.65□□□□□ -0.06
SGCA-205ENST00000505964 RCAN3Q9UKA8 241 aa14.65□□□□□ -0.06
SGCA-205ENST00000505964 KIAA1551Q9HCM1 1747 aa14.64□□□□□ -0.07
SGCA-205ENST00000505964 FLAD1Q8NFF5 587 aa14.64□□□□□ -0.07
SGCA-205ENST00000505964 ZNF428Q96B54 188 aa14.64□□□□□ -0.07
SGCA-205ENST00000505964 EXOSC9Q06265 439 aaKnown RBP14.63□□□□□ -0.07
SGCA-205ENST00000505964 TSPYL4Q9UJ04 414 aa14.63□□□□□ -0.07
SGCA-205ENST00000505964 KIF13BQ9NQT8 1826 aa14.63□□□□□ -0.07
SGCA-205ENST00000505964 RNF123Q5XPI4 1314 aa14.63□□□□□ -0.07
SGCA-205ENST00000505964 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.62□□□□□ -0.07
SGCA-205ENST00000505964 ERVV-2B6SEH9 535 aa14.62□□□□□ -0.07
SGCA-205ENST00000505964 WDR90Q96KV7 1748 aa14.62□□□□□ -0.07
SGCA-205ENST00000505964 SLC52A2Q9HAB3 445 aa14.62□□□□□ -0.07
SGCA-205ENST00000505964 CICQ96RK0 1608 aaPredicted RBP14.62□□□□□ -0.07
SGCA-205ENST00000505964 SOS1Q07889 1333 aaPredicted RBP14.62□□□□□ -0.07
SGCA-205ENST00000505964 UBR2Q8IWV8 1755 aa14.61□□□□□ -0.07
SGCA-205ENST00000505964 SUPT16HQ9Y5B9 1047 aaKnown RBP14.61□□□□□ -0.07
SGCA-205ENST00000505964 BRCA1P38398 1863 aaKnown RBP14.61□□□□□ -0.07
SGCA-205ENST00000505964 LINC00116Q8NCU8 138 aa14.6□□□□□ -0.07
SGCA-205ENST00000505964 BTBD11A6QL63 1104 aa14.59□□□□□ -0.07
SGCA-205ENST00000505964 VAMP4O75379 141 aa14.58□□□□□ -0.08
SGCA-205ENST00000505964 APLP1P51693 650 aa14.58□□□□□ -0.08
SGCA-205ENST00000505964 CABP4P57796 275 aa14.58□□□□□ -0.08
SGCA-205ENST00000505964 TWISTNBQ3B726 338 aaPredicted RBP14.58□□□□□ -0.08
SGCA-205ENST00000505964 NFATC2IPQ8NCF5 419 aa14.58□□□□□ -0.08
SGCA-205ENST00000505964 PIGBQ92521 554 aa14.58□□□□□ -0.08
SGCA-205ENST00000505964 SMARCC1Q92922 1105 aaPredicted RBP14.58□□□□□ -0.08
SGCA-205ENST00000505964 MIS18AQ9NYP9 233 aa14.58□□□□□ -0.08
SGCA-205ENST00000505964 PXDNLA1KZ92 1463 aa14.57□□□□□ -0.08
SGCA-205ENST00000505964 RARSP54136 660 aaKnown RBP14.57□□□□□ -0.08
SGCA-205ENST00000505964 ALDH1L2Q3SY69 923 aa14.57□□□□□ -0.08
SGCA-205ENST00000505964 C8orf58Q8NAV2 365 aa14.57□□□□□ -0.08
SGCA-205ENST00000505964 LAMB4A4D0S4 1761 aa14.56□□□□□ -0.08
SGCA-205ENST00000505964 LOC102724428A0A0B4J2F2 783 aa14.56□□□□□ -0.08
SGCA-205ENST00000505964 GNPATO15228 680 aa14.56□□□□□ -0.08
SGCA-205ENST00000505964 HOXB7P09629 217 aa14.56□□□□□ -0.08
SGCA-205ENST00000505964 SSFA2P28290 1259 aa14.56□□□□□ -0.08
SGCA-205ENST00000505964 SIK1P57059 783 aa14.56□□□□□ -0.08
SGCA-205ENST00000505964 HTRA3P83110 453 aa14.56□□□□□ -0.08
SGCA-205ENST00000505964 DNAJC5GQ8N7S2 189 aa14.56□□□□□ -0.08
SGCA-205ENST00000505964 TSPYL6Q8N831 410 aa14.56□□□□□ -0.08
SGCA-205ENST00000505964 CHMP4AQ9BY43 222 aa14.56□□□□□ -0.08
SGCA-205ENST00000505964 NMRK2Q9NPI5 230 aa14.56□□□□□ -0.08
SGCA-205ENST00000505964 BCS1LQ9Y276 419 aa14.56□□□□□ -0.08
SGCA-205ENST00000505964 ARFGEF1Q9Y6D6 1849 aa14.56□□□□□ -0.08
SGCA-205ENST00000505964 HEG1Q9ULI3 1381 aa14.56□□□□□ -0.08
SGCA-205ENST00000505964 MMP10P09238 476 aa14.55□□□□□ -0.08
SGCA-205ENST00000505964 BRPF1P55201 1214 aaPredicted RBP14.55□□□□□ -0.08
SGCA-205ENST00000505964 RRP1P56182 461 aaKnown RBP14.55□□□□□ -0.08
SGCA-205ENST00000505964 EIF4A1P60842 406 aaKnown RBP14.55□□□□□ -0.08
SGCA-205ENST00000505964 ITPK1Q13572 414 aa14.55□□□□□ -0.08
SGCA-205ENST00000505964 ZNF790Q6PG37 636 aa14.55□□□□□ -0.08
SGCA-205ENST00000505964 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.55□□□□□ -0.08
SGCA-205ENST00000505964 A0A0G2JLW4 131 aa14.54□□□□□ -0.08
SGCA-205ENST00000505964 TOMM70O94826 608 aa14.54□□□□□ -0.08
SGCA-205ENST00000505964 NEFLP07196 543 aa14.54□□□□□ -0.08
SGCA-205ENST00000505964 HMGB2P26583 209 aaKnown RBP14.54□□□□□ -0.08
SGCA-205ENST00000505964 TMOD3Q9NYL9 352 aa14.54□□□□□ -0.08
SGCA-205ENST00000505964 ASAP1Q9ULH1 1129 aa14.54□□□□□ -0.08
SGCA-205ENST00000505964 C4AP0C0L4 1744 aa14.54□□□□□ -0.08
SGCA-205ENST00000505964 SBF1O95248 1867 aa14.54□□□□□ -0.08
SGCA-205ENST00000505964 MYH14Q7Z406 1995 aaKnown RBP14.54□□□□□ -0.08
SGCA-205ENST00000505964 CAPN15O75808 1086 aa14.53□□□□□ -0.08
SGCA-205ENST00000505964 ARHGAP27Q6ZUM4 889 aa14.53□□□□□ -0.08
SGCA-205ENST00000505964 COL5A3P25940 1745 aaPredicted RBP14.52□□□□□ -0.08
SGCA-205ENST00000505964 ELL2O00472 640 aaPredicted RBP14.52□□□□□ -0.09
SGCA-205ENST00000505964 KCNQ3O43525 872 aa14.52□□□□□ -0.09
SGCA-205ENST00000505964 BCAR3O75815 825 aa14.52□□□□□ -0.09
SGCA-205ENST00000505964 ATP6V1AP38606 617 aa14.52□□□□□ -0.09
SGCA-205ENST00000505964 KRT24Q2M2I5 525 aa14.52□□□□□ -0.09
SGCA-205ENST00000505964 TTC5Q8N0Z6 440 aa14.52□□□□□ -0.09
SGCA-205ENST00000505964 SSH1Q8WYL5 1049 aa14.52□□□□□ -0.09
SGCA-205ENST00000505964 KCPQ6ZWJ8 1503 aa14.51□□□□□ -0.09
SGCA-205ENST00000505964 SMC4Q9NTJ3 1288 aa14.51□□□□□ -0.09
SGCA-205ENST00000505964 CCDC88AQ3V6T2 1871 aa14.5□□□□□ -0.09
SGCA-205ENST00000505964 C10orf71Q711Q0 1435 aa14.5□□□□□ -0.09
SGCA-205ENST00000505964 KIF16BQ96L93 1317 aa14.5□□□□□ -0.09
SGCA-205ENST00000505964 ZNF831Q5JPB2 1677 aa14.5□□□□□ -0.09
SGCA-205ENST00000505964 SLC39A6Q13433 755 aa14.5□□□□□ -0.09
SGCA-205ENST00000505964 COL13A1Q5TAT6 717 aaPredicted RBP14.5□□□□□ -0.09
SGCA-205ENST00000505964 CCDC30Q5VVM6 783 aa14.5□□□□□ -0.09
SGCA-205ENST00000505964 FMNL2Q96PY5 1086 aa14.5□□□□□ -0.09
SGCA-205ENST00000505964 DPEP1P16444 411 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms