RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 USP17L12C9JPN9 530 aa7.19□□□□□ -1.26
HMGB1P29-201ENST00000505659 USP17L11C9JVI0 530 aa7.19□□□□□ -1.26
HMGB1P29-201ENST00000505659 USP17L21D6R901 530 aa7.19□□□□□ -1.26
HMGB1P29-201ENST00000505659 USP17L18D6R9N7 530 aa7.19□□□□□ -1.26
HMGB1P29-201ENST00000505659 USP17L22D6RA61 530 aa7.19□□□□□ -1.26
HMGB1P29-201ENST00000505659 USP17L17D6RBQ6 530 aa7.19□□□□□ -1.26
HMGB1P29-201ENST00000505659 USP17L19D6RCP7 530 aa7.19□□□□□ -1.26
HMGB1P29-201ENST00000505659 USP17L20D6RJB6 530 aa7.19□□□□□ -1.26
HMGB1P29-201ENST00000505659 H7C1W4 665 aa7.19□□□□□ -1.26
HMGB1P29-201ENST00000505659 USP17L24Q0WX57 530 aa7.19□□□□□ -1.26
HMGB1P29-201ENST00000505659 PTK7Q13308 1070 aa7.19□□□□□ -1.26
HMGB1P29-201ENST00000505659 GAS2L2Q8NHY3 880 aa7.19□□□□□ -1.26
HMGB1P29-201ENST00000505659 WHAMMQ8TF30 809 aa7.19□□□□□ -1.26
HMGB1P29-201ENST00000505659 KLRG1Q96E93 195 aa7.19□□□□□ -1.26
HMGB1P29-201ENST00000505659 DPYDQ12882 1025 aa7.18□□□□□ -1.26
HMGB1P29-201ENST00000505659 LARP1Q6PKG0 1096 aaKnown RBP7.18□□□□□ -1.26
HMGB1P29-201ENST00000505659 GMCL1Q96IK5 515 aa7.18□□□□□ -1.26
HMGB1P29-201ENST00000505659 VRTNQ9H8Y1 702 aa7.18□□□□□ -1.26
HMGB1P29-201ENST00000505659 CSB-PGBD3P0DP91 1061 aa7.17□□□□□ -1.26
HMGB1P29-201ENST00000505659 PGBD3Q8N328 593 aa7.17□□□□□ -1.26
HMGB1P29-201ENST00000505659 L3MBTL2Q969R5 705 aa7.17□□□□□ -1.26
HMGB1P29-201ENST00000505659 STK17AQ9UEE5 414 aa7.17□□□□□ -1.26
HMGB1P29-201ENST00000505659 FAM196BA6NMK8 535 aa7.16□□□□□ -1.26
HMGB1P29-201ENST00000505659 C21orf2O43822 256 aa7.16□□□□□ -1.26
HMGB1P29-201ENST00000505659 ADAMTS2O95450 1211 aa7.16□□□□□ -1.26
HMGB1P29-201ENST00000505659 NOS2P35228 1153 aa7.16□□□□□ -1.26
HMGB1P29-201ENST00000505659 SEC13P55735 322 aa7.16□□□□□ -1.26
HMGB1P29-201ENST00000505659 TEAD4Q15561 434 aa7.16□□□□□ -1.26
HMGB1P29-201ENST00000505659 NBPF1Q3BBV0 1214 aa7.16□□□□□ -1.26
HMGB1P29-201ENST00000505659 FOXR1Q6PIV2 292 aa7.16□□□□□ -1.26
HMGB1P29-201ENST00000505659 ANKMY2Q8IV38 441 aa7.16□□□□□ -1.26
HMGB1P29-201ENST00000505659 ABHD17AQ96GS6 310 aa7.16□□□□□ -1.26
HMGB1P29-201ENST00000505659 ARXQ96QS3 562 aa7.16□□□□□ -1.26
HMGB1P29-201ENST00000505659 CRISPLD1Q9H336 500 aa7.16□□□□□ -1.26
HMGB1P29-201ENST00000505659 ZNF232Q9UNY5 417 aa7.16□□□□□ -1.26
HMGB1P29-201ENST00000505659 RBM19Q9Y4C8 960 aaKnown RBP7.16□□□□□ -1.26
HMGB1P29-201ENST00000505659 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.15□□□□□ -1.26
HMGB1P29-201ENST00000505659 A0A1W2PNR3 127 aa7.15□□□□□ -1.26
HMGB1P29-201ENST00000505659 M0R2N6 131 aa7.15□□□□□ -1.26
HMGB1P29-201ENST00000505659 EML1O00423 815 aa7.15□□□□□ -1.26
HMGB1P29-201ENST00000505659 SLURP2P0DP57 97 aa7.15□□□□□ -1.26
HMGB1P29-201ENST00000505659 ARSJQ5FYB0 599 aaPredicted RBP7.15□□□□□ -1.26
HMGB1P29-201ENST00000505659 EFHC2Q5JST6 749 aa7.15□□□□□ -1.26
HMGB1P29-201ENST00000505659 ZNF385CQ66K41 422 aaPredicted RBP7.15□□□□□ -1.26
HMGB1P29-201ENST00000505659 C14orf37Q86TY3 774 aa7.15□□□□□ -1.26
HMGB1P29-201ENST00000505659 TRERF1Q96PN7 1200 aa7.15□□□□□ -1.26
HMGB1P29-201ENST00000505659 ZIC5Q96T25 663 aa7.15□□□□□ -1.26
HMGB1P29-201ENST00000505659 MBIPQ9NS73 344 aa7.15□□□□□ -1.26
HMGB1P29-201ENST00000505659 HCN2Q9UL51 889 aa7.15□□□□□ -1.26
HMGB1P29-201ENST00000505659 SERTM1A2A2V5 107 aa7.14□□□□□ -1.27
HMGB1P29-201ENST00000505659 BNIP3LO60238 219 aa7.14□□□□□ -1.27
HMGB1P29-201ENST00000505659 IGF1RP08069 1367 aa7.14□□□□□ -1.27
HMGB1P29-201ENST00000505659 TATP17735 454 aaPredicted RBP7.14□□□□□ -1.27
HMGB1P29-201ENST00000505659 C1orf216Q8TAB5 229 aa7.14□□□□□ -1.27
HMGB1P29-201ENST00000505659 SCG3Q8WXD2 468 aaKnown RBP7.14□□□□□ -1.27
HMGB1P29-201ENST00000505659 C1orf115Q9H7X2 142 aa7.14□□□□□ -1.27
HMGB1P29-201ENST00000505659 ZDHHC3Q9NYG2 299 aa7.14□□□□□ -1.27
HMGB1P29-201ENST00000505659 PPP1R12BO60237 982 aaPredicted RBP7.13□□□□□ -1.27
HMGB1P29-201ENST00000505659 MX2P20592 715 aa7.13□□□□□ -1.27
HMGB1P29-201ENST00000505659 PSMA6P60900 246 aaKnown RBP7.13□□□□□ -1.27
HMGB1P29-201ENST00000505659 SRSF11Q05519 484 aaKnown RBP7.13□□□□□ -1.27
HMGB1P29-201ENST00000505659 LYPD4Q6UWN0 246 aa7.13□□□□□ -1.27
HMGB1P29-201ENST00000505659 HINFPQ9BQA5 517 aa7.13□□□□□ -1.27
HMGB1P29-201ENST00000505659 ZCCHC2Q9C0B9 1178 aaKnown RBP7.13□□□□□ -1.27
HMGB1P29-201ENST00000505659 NDFIP2Q9NV92 336 aa7.13□□□□□ -1.27
HMGB1P29-201ENST00000505659 HCN4Q9Y3Q4 1203 aa7.13□□□□□ -1.27
HMGB1P29-201ENST00000505659 DCDC2BA2VCK2 349 aa7.12□□□□□ -1.27
HMGB1P29-201ENST00000505659 SRPK2P78362 688 aaKnown RBP7.12□□□□□ -1.27
HMGB1P29-201ENST00000505659 LBRQ14739 615 aaKnown RBP7.12□□□□□ -1.27
HMGB1P29-201ENST00000505659 BICDL1Q6ZP65 573 aa7.12□□□□□ -1.27
HMGB1P29-201ENST00000505659 SVOPQ8N4V2 548 aa7.12□□□□□ -1.27
HMGB1P29-201ENST00000505659 CHMP7Q8WUX9 453 aaPredicted RBP7.12□□□□□ -1.27
HMGB1P29-201ENST00000505659 C7orf43Q8WVR3 580 aa7.12□□□□□ -1.27
HMGB1P29-201ENST00000505659 ZMIZ1Q9ULJ6 1067 aa7.12□□□□□ -1.27
HMGB1P29-201ENST00000505659 NOVA2Q9UNW9 492 aaKnown RBP7.12□□□□□ -1.27
HMGB1P29-201ENST00000505659 ATAD2Q6PL18 1390 aa7.11□□□□□ -1.27
HMGB1P29-201ENST00000505659 C2CD2LO14523 706 aa7.11□□□□□ -1.27
HMGB1P29-201ENST00000505659 ATXN7O15265 892 aaPredicted RBP7.11□□□□□ -1.27
HMGB1P29-201ENST00000505659 CTBSQ01459 385 aa7.11□□□□□ -1.27
HMGB1P29-201ENST00000505659 POTEAQ6S8J7 498 aa7.11□□□□□ -1.27
HMGB1P29-201ENST00000505659 LRRC69Q6ZNQ3 347 aa7.11□□□□□ -1.27
HMGB1P29-201ENST00000505659 STK32AQ8WU08 396 aa7.11□□□□□ -1.27
HMGB1P29-201ENST00000505659 CCDC97Q96F63 343 aaPredicted RBP7.11□□□□□ -1.27
HMGB1P29-201ENST00000505659 CFHR5Q9BXR6 569 aa7.11□□□□□ -1.27
HMGB1P29-201ENST00000505659 PHACTR1Q9C0D0 580 aa7.11□□□□□ -1.27
HMGB1P29-201ENST00000505659 FGFR3P22607 806 aa7.1□□□□□ -1.27
HMGB1P29-201ENST00000505659 NLRP8Q86W28 1048 aa7.1□□□□□ -1.27
HMGB1P29-201ENST00000505659 CCDC82Q8N4S0 544 aa7.1□□□□□ -1.27
HMGB1P29-201ENST00000505659 ACDQ96AP0 544 aa7.1□□□□□ -1.27
HMGB1P29-201ENST00000505659 NGLY1Q96IV0 654 aa7.1□□□□□ -1.27
HMGB1P29-201ENST00000505659 HSH2DQ96JZ2 352 aa7.1□□□□□ -1.27
HMGB1P29-201ENST00000505659 ATXN7L1Q9ULK2 861 aaPredicted RBP7.1□□□□□ -1.27
HMGB1P29-201ENST00000505659 PCDHGC4Q9Y5F7 938 aa7.1□□□□□ -1.27
HMGB1P29-201ENST00000505659 KHNYNO15037 678 aaKnown RBP7.09□□□□□ -1.27
HMGB1P29-201ENST00000505659 CELA2BP08218 269 aaPredicted RBP7.09□□□□□ -1.27
HMGB1P29-201ENST00000505659 CD33P20138 364 aa7.09□□□□□ -1.27
HMGB1P29-201ENST00000505659 HIRAP54198 1017 aaPredicted RBP7.09□□□□□ -1.27
HMGB1P29-201ENST00000505659 FAM200AQ8TCP9 573 aa7.09□□□□□ -1.27
HMGB1P29-201ENST00000505659 RHPN1Q8TCX5 695 aa7.09□□□□□ -1.27
HMGB1P29-201ENST00000505659 C2orf49Q9BVC5 232 aaPredicted RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms