RNA–Protein interactions for RNA: ENST00000505331.1

CPNE4-204, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-204ENST00000505331 SAGE1Q9NXZ1 904 aa6.25□□□□□ -1.41
CPNE4-204ENST00000505331 HACL1Q9UJ83 578 aa6.25□□□□□ -1.41
CPNE4-204ENST00000505331 C4AP0C0L4 1744 aa6.25□□□□□ -1.41
CPNE4-204ENST00000505331 TTC21AQ8NDW8 1320 aa6.25□□□□□ -1.41
CPNE4-204ENST00000505331 C19orf67A6NJJ6 358 aa6.24□□□□□ -1.41
CPNE4-204ENST00000505331 AKAP4Q5JQC9 854 aa6.24□□□□□ -1.41
CPNE4-204ENST00000505331 DOT1LQ8TEK3 1739 aa6.24□□□□□ -1.41
CPNE4-204ENST00000505331 CGNL1Q0VF96 1302 aa6.24□□□□□ -1.41
CPNE4-204ENST00000505331 LTBP3Q9NS15 1303 aa6.24□□□□□ -1.41
CPNE4-204ENST00000505331 A0A0C4DFX4 3053 aa6.23□□□□□ -1.41
CPNE4-204ENST00000505331 ATP6V1AP38606 617 aa6.23□□□□□ -1.41
CPNE4-204ENST00000505331 DDR1Q08345 913 aa6.23□□□□□ -1.41
CPNE4-204ENST00000505331 NOGQ13253 232 aa6.23□□□□□ -1.41
CPNE4-204ENST00000505331 ITPK1Q13572 414 aa6.23□□□□□ -1.41
CPNE4-204ENST00000505331 CST9Q5W186 159 aa6.23□□□□□ -1.41
CPNE4-204ENST00000505331 SAPCD2Q86UD0 394 aa6.23□□□□□ -1.41
CPNE4-204ENST00000505331 COL25A1Q9BXS0 654 aaPredicted RBP6.23□□□□□ -1.41
CPNE4-204ENST00000505331 BRCA1P38398 1863 aaKnown RBP6.23□□□□□ -1.41
CPNE4-204ENST00000505331 RC3H1Q5TC82 1133 aaKnown RBP6.22□□□□□ -1.41
CPNE4-204ENST00000505331 PIGBQ92521 554 aa6.22□□□□□ -1.41
CPNE4-204ENST00000505331 TAOK3Q9H2K8 898 aa6.22□□□□□ -1.41
CPNE4-204ENST00000505331 PRDM6Q9NQX0 595 aa6.22□□□□□ -1.41
CPNE4-204ENST00000505331 SMG6Q86US8 1419 aaKnown RBP6.22□□□□□ -1.41
CPNE4-204ENST00000505331 TIAM2Q8IVF5 1701 aa6.22□□□□□ -1.41
CPNE4-204ENST00000505331 UBR3Q6ZT12 1888 aa6.22□□□□□ -1.41
CPNE4-204ENST00000505331 INSRP06213 1382 aa6.21□□□□□ -1.41
CPNE4-204ENST00000505331 POLRMTO00411 1230 aaKnown RBP6.21□□□□□ -1.42
CPNE4-204ENST00000505331 RPS6KA4O75676 772 aa6.21□□□□□ -1.42
CPNE4-204ENST00000505331 PCDH11XQ9BZA7 1347 aa6.21□□□□□ -1.42
CPNE4-204ENST00000505331 PCDH11YQ9BZA8 1340 aa6.21□□□□□ -1.42
CPNE4-204ENST00000505331 SBF1O95248 1867 aa6.2□□□□□ -1.42
CPNE4-204ENST00000505331 H0YIN7 160 aa6.2□□□□□ -1.42
CPNE4-204ENST00000505331 FMR1Q06787 632 aaKnown RBP eCLIP6.2□□□□□ -1.42
CPNE4-204ENST00000505331 FKBP8Q14318 412 aa6.2□□□□□ -1.42
CPNE4-204ENST00000505331 IP6K1Q92551 441 aa6.2□□□□□ -1.42
CPNE4-204ENST00000505331 LTV1Q96GA3 475 aaPredicted RBP6.2□□□□□ -1.42
CPNE4-204ENST00000505331 MAP3K19Q56UN5 1328 aa6.2□□□□□ -1.42
CPNE4-204ENST00000505331 USP31Q70CQ4 1352 aa6.19□□□□□ -1.42
CPNE4-204ENST00000505331 C21orf2O43822 256 aa6.19□□□□□ -1.42
CPNE4-204ENST00000505331 TM4SF1P30408 202 aa6.19□□□□□ -1.42
CPNE4-204ENST00000505331 C2CD5Q86YS7 1000 aa6.19□□□□□ -1.42
CPNE4-204ENST00000505331 RAPGEF4Q8WZA2 1011 aa6.19□□□□□ -1.42
CPNE4-204ENST00000505331 OTUD5Q96G74 571 aa6.19□□□□□ -1.42
CPNE4-204ENST00000505331 STAC3Q96MF2 364 aa6.19□□□□□ -1.42
CPNE4-204ENST00000505331 RNF186Q9NXI6 227 aa6.19□□□□□ -1.42
CPNE4-204ENST00000505331 CD163L1Q9NR16 1453 aa6.19□□□□□ -1.42
CPNE4-204ENST00000505331 RNF123Q5XPI4 1314 aa6.19□□□□□ -1.42
CPNE4-204ENST00000505331 CNTNAP4Q9C0A0 1308 aa6.19□□□□□ -1.42
CPNE4-204ENST00000505331 ADAMTSL1Q8N6G6 1762 aa6.18□□□□□ -1.42
CPNE4-204ENST00000505331 TRAF5O00463 557 aa6.18□□□□□ -1.42
CPNE4-204ENST00000505331 TRPA1O75762 1119 aa6.18□□□□□ -1.42
CPNE4-204ENST00000505331 GABBR2O75899 941 aa6.18□□□□□ -1.42
CPNE4-204ENST00000505331 CELF2O95319 508 aaKnown RBP6.18□□□□□ -1.42
CPNE4-204ENST00000505331 SOGA3Q5TF21 947 aa6.18□□□□□ -1.42
CPNE4-204ENST00000505331 FBXO46Q6PJ61 603 aaPredicted RBP6.18□□□□□ -1.42
CPNE4-204ENST00000505331 BICDL1Q6ZP65 573 aa6.18□□□□□ -1.42
CPNE4-204ENST00000505331 ZIC5Q96T25 663 aa6.18□□□□□ -1.42
CPNE4-204ENST00000505331 ASAP1Q9ULH1 1129 aa6.18□□□□□ -1.42
CPNE4-204ENST00000505331 USP42Q9H9J4 1324 aaKnown RBP6.18□□□□□ -1.42
CPNE4-204ENST00000505331 RGPD5Q99666 1765 aa6.18□□□□□ -1.42
CPNE4-204ENST00000505331 TAF1LQ8IZX4 1826 aa6.18□□□□□ -1.42
CPNE4-204ENST00000505331 CYP27B1O15528 508 aa6.17□□□□□ -1.42
CPNE4-204ENST00000505331 TATP17735 454 aaPredicted RBP6.17□□□□□ -1.42
CPNE4-204ENST00000505331 COL9A1P20849 921 aa6.17□□□□□ -1.42
CPNE4-204ENST00000505331 PLA2G5P39877 138 aa6.17□□□□□ -1.42
CPNE4-204ENST00000505331 INTS3Q68E01 1043 aaKnown RBP6.17□□□□□ -1.42
CPNE4-204ENST00000505331 GPC2Q8N158 579 aa6.17□□□□□ -1.42
CPNE4-204ENST00000505331 TMOD3Q9NYL9 352 aa6.17□□□□□ -1.42
CPNE4-204ENST00000505331 SRP68Q9UHB9 627 aaKnown RBP6.17□□□□□ -1.42
CPNE4-204ENST00000505331 HDAC9Q9UKV0 1011 aa6.17□□□□□ -1.42
CPNE4-204ENST00000505331 PDZRN3Q9UPQ7 1066 aa6.17□□□□□ -1.42
CPNE4-204ENST00000505331 ZNF541Q9H0D2 1346 aa6.17□□□□□ -1.42
CPNE4-204ENST00000505331 LMOD1P29536 600 aaPredicted RBP6.16□□□□□ -1.42
CPNE4-204ENST00000505331 NKX1-1Q15270 411 aaPredicted RBP6.16□□□□□ -1.42
CPNE4-204ENST00000505331 USP50Q70EL3 339 aaPredicted RBP6.16□□□□□ -1.42
CPNE4-204ENST00000505331 ZNF622Q969S3 477 aaKnown RBP eCLIP6.16□□□□□ -1.42
CPNE4-204ENST00000505331 MPHOSPH9Q99550 1183 aa6.16□□□□□ -1.42
CPNE4-204ENST00000505331 KDM2AQ9Y2K7 1162 aa6.16□□□□□ -1.42
CPNE4-204ENST00000505331 SZT2Q5T011 3432 aa6.16□□□□□ -1.42
CPNE4-204ENST00000505331 SCN4AP35499 1836 aa6.15□□□□□ -1.42
CPNE4-204ENST00000505331 POTEFA5A3E0 1075 aa6.15□□□□□ -1.42
CPNE4-204ENST00000505331 H0YGN5 161 aa6.15□□□□□ -1.42
CPNE4-204ENST00000505331 PRR29P0C7W0 189 aa6.15□□□□□ -1.42
CPNE4-204ENST00000505331 ANKRD13DQ6ZTN6 518 aa6.15□□□□□ -1.42
CPNE4-204ENST00000505331 DCAF11Q8TEB1 546 aa6.15□□□□□ -1.42
CPNE4-204ENST00000505331 CCDC102AQ96A19 550 aa6.15□□□□□ -1.42
CPNE4-204ENST00000505331 FAM122AQ96E09 287 aa6.15□□□□□ -1.42
CPNE4-204ENST00000505331 ATG3Q9NT62 314 aa6.15□□□□□ -1.42
CPNE4-204ENST00000505331 RBM27Q9P2N5 1060 aaKnown RBP6.15□□□□□ -1.42
CPNE4-204ENST00000505331 KDRP35968 1356 aa6.15□□□□□ -1.43
CPNE4-204ENST00000505331 KTN1Q86UP2 1357 aaKnown RBP6.15□□□□□ -1.43
CPNE4-204ENST00000505331 CASP8AP2Q9UKL3 1982 aa6.15□□□□□ -1.43
CPNE4-204ENST00000505331 COL6A3P12111 3177 aa6.14□□□□□ -1.43
CPNE4-204ENST00000505331 FAM155AB1AL88 458 aaPredicted RBP6.14□□□□□ -1.43
CPNE4-204ENST00000505331 FZD9O00144 591 aa6.14□□□□□ -1.43
CPNE4-204ENST00000505331 ZPR1O75312 459 aa6.14□□□□□ -1.43
CPNE4-204ENST00000505331 SERPINB2P05120 415 aa6.14□□□□□ -1.43
CPNE4-204ENST00000505331 HOXC9P31274 260 aa6.14□□□□□ -1.43
CPNE4-204ENST00000505331 PDE6BP35913 854 aa6.14□□□□□ -1.43
CPNE4-204ENST00000505331 KIF23Q02241 960 aaPredicted RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms