RNA–Protein interactions for RNA: ENST00000505205.1

TRIM23-204, Transcript of tripartite motif containing 23, humanhuman

TSL 3

Gene TRIM23, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-204ENST00000505205 TJP1Q07157 1748 aa12.74□□□□□ -0.37
TRIM23-204ENST00000505205 TIAM2Q8IVF5 1701 aa12.74□□□□□ -0.37
TRIM23-204ENST00000505205 ADAMTS7Q9UKP4 1686 aa12.73□□□□□ -0.37
TRIM23-204ENST00000505205 RASSF7Q02833 373 aa12.73□□□□□ -0.37
TRIM23-204ENST00000505205 KDM6AO15550 1401 aaPredicted RBP12.72□□□□□ -0.37
TRIM23-204ENST00000505205 CCDC88AQ3V6T2 1871 aa12.72□□□□□ -0.37
TRIM23-204ENST00000505205 ERVV-2B6SEH9 535 aa12.72□□□□□ -0.37
TRIM23-204ENST00000505205 AFDNP55196 1824 aaKnown RBP12.72□□□□□ -0.37
TRIM23-204ENST00000505205 DLEC1Q9Y238 1755 aa12.71□□□□□ -0.37
TRIM23-204ENST00000505205 USP42Q9H9J4 1324 aaKnown RBP12.71□□□□□ -0.37
TRIM23-204ENST00000505205 CRKLP46109 303 aaKnown RBP12.71□□□□□ -0.37
TRIM23-204ENST00000505205 EIF4A2Q14240 407 aaKnown RBP12.71□□□□□ -0.37
TRIM23-204ENST00000505205 ZC3H4Q9UPT8 1303 aaKnown RBP12.7□□□□□ -0.38
TRIM23-204ENST00000505205 POLRMTO00411 1230 aaKnown RBP12.7□□□□□ -0.38
TRIM23-204ENST00000505205 PTCD1O75127 700 aaKnown RBP12.7□□□□□ -0.38
TRIM23-204ENST00000505205 POLKQ9UBT6 870 aa12.7□□□□□ -0.38
TRIM23-204ENST00000505205 VEGFAP15692 232 aaPredicted RBP12.69□□□□□ -0.38
TRIM23-204ENST00000505205 CABP4P57796 275 aa12.69□□□□□ -0.38
TRIM23-204ENST00000505205 NRXN2Q9P2S2 1712 aa12.68□□□□□ -0.38
TRIM23-204ENST00000505205 GLTPD2A6NH11 291 aa12.68□□□□□ -0.38
TRIM23-204ENST00000505205 HSP90AB1P08238 724 aaKnown RBP12.68□□□□□ -0.38
TRIM23-204ENST00000505205 TM4SF1P30408 202 aa12.68□□□□□ -0.38
TRIM23-204ENST00000505205 LMNB1P20700 586 aa12.67□□□□□ -0.38
TRIM23-204ENST00000505205 ZNF530Q6P9A1 599 aaPredicted RBP12.67□□□□□ -0.38
TRIM23-204ENST00000505205 POTECB2RU33 542 aa12.66□□□□□ -0.38
TRIM23-204ENST00000505205 TNNT2P45379 298 aaPredicted RBP12.66□□□□□ -0.38
TRIM23-204ENST00000505205 CDCA8Q53HL2 280 aa12.66□□□□□ -0.38
TRIM23-204ENST00000505205 INTS5Q6P9B9 1019 aaKnown RBP12.66□□□□□ -0.38
TRIM23-204ENST00000505205 PLEKHO1Q53GL0 409 aaPredicted RBP12.65□□□□□ -0.38
TRIM23-204ENST00000505205 USPL1Q5W0Q7 1092 aa12.65□□□□□ -0.38
TRIM23-204ENST00000505205 SCN11AQ9UI33 1791 aa12.65□□□□□ -0.38
TRIM23-204ENST00000505205 NFKBIEO00221 500 aa12.64□□□□□ -0.39
TRIM23-204ENST00000505205 MTHFSP49914 203 aa12.64□□□□□ -0.39
TRIM23-204ENST00000505205 NFATC2IPQ8NCF5 419 aa12.64□□□□□ -0.39
TRIM23-204ENST00000505205 MKRN1Q9UHC7 482 aaKnown RBP12.64□□□□□ -0.39
TRIM23-204ENST00000505205 DICER1Q9UPY3 1922 aaKnown RBP12.64□□□□□ -0.39
TRIM23-204ENST00000505205 SOS1Q07889 1333 aaPredicted RBP12.63□□□□□ -0.39
TRIM23-204ENST00000505205 ZPR1O75312 459 aa12.63□□□□□ -0.39
TRIM23-204ENST00000505205 NFIXQ14938 502 aa12.63□□□□□ -0.39
TRIM23-204ENST00000505205 CARMIL3Q8ND23 1372 aa12.63□□□□□ -0.39
TRIM23-204ENST00000505205 ANKRD31Q8N7Z5 1873 aa12.62□□□□□ -0.39
TRIM23-204ENST00000505205 AMOTQ4VCS5 1084 aa12.62□□□□□ -0.39
TRIM23-204ENST00000505205 C2CD5Q86YS7 1000 aa12.62□□□□□ -0.39
TRIM23-204ENST00000505205 AEBP1Q8IUX7 1158 aa12.62□□□□□ -0.39
TRIM23-204ENST00000505205 DNAJC10Q8IXB1 793 aa12.62□□□□□ -0.39
TRIM23-204ENST00000505205 TTLL6Q8N841 843 aa12.62□□□□□ -0.39
TRIM23-204ENST00000505205 COL11A2P13942 1736 aaPredicted RBP12.62□□□□□ -0.39
TRIM23-204ENST00000505205 FER1L6Q2WGJ9 1857 aa12.61□□□□□ -0.39
TRIM23-204ENST00000505205 COL15A1P39059 1388 aa12.61□□□□□ -0.39
TRIM23-204ENST00000505205 VIRMAQ69YN4 1812 aaKnown RBP12.61□□□□□ -0.39
TRIM23-204ENST00000505205 FOXN1O15353 648 aa12.61□□□□□ -0.39
TRIM23-204ENST00000505205 SERPINB2P05120 415 aa12.61□□□□□ -0.39
TRIM23-204ENST00000505205 C1orf141Q5JVX7 400 aa12.61□□□□□ -0.39
TRIM23-204ENST00000505205 BCL2L12Q9HB09 334 aa12.61□□□□□ -0.39
TRIM23-204ENST00000505205 CREBZFQ9NS37 354 aa12.61□□□□□ -0.39
TRIM23-204ENST00000505205 POTEIP0CG38 1075 aa12.6□□□□□ -0.39
TRIM23-204ENST00000505205 POTEJP0CG39 1038 aa12.6□□□□□ -0.39
TRIM23-204ENST00000505205 NARFQ9UHQ1 456 aa12.6□□□□□ -0.39
TRIM23-204ENST00000505205 H0YIN7 160 aa12.59□□□□□ -0.39
TRIM23-204ENST00000505205 SLC34A2O95436 690 aa12.59□□□□□ -0.39
TRIM23-204ENST00000505205 CYP19A1P11511 503 aaPredicted RBP12.59□□□□□ -0.39
TRIM23-204ENST00000505205 CHADLQ6NUI6 762 aa12.59□□□□□ -0.39
TRIM23-204ENST00000505205 DPY19L2Q6NUT2 758 aa12.59□□□□□ -0.39
TRIM23-204ENST00000505205 ZBTB1Q9Y2K1 713 aa12.59□□□□□ -0.39
TRIM23-204ENST00000505205 CACNA1SQ13698 1873 aa12.59□□□□□ -0.39
TRIM23-204ENST00000505205 CNTNAP1P78357 1384 aa12.58□□□□□ -0.4
TRIM23-204ENST00000505205 ERFEQ4G0M1 354 aa12.58□□□□□ -0.4
TRIM23-204ENST00000505205 REM2Q8IYK8 340 aaPredicted RBP12.58□□□□□ -0.4
TRIM23-204ENST00000505205 C21orf2O43822 256 aa12.57□□□□□ -0.4
TRIM23-204ENST00000505205 PRDM10Q9NQV6 1147 aa12.57□□□□□ -0.4
TRIM23-204ENST00000505205 MRC1P22897 1456 aa12.57□□□□□ -0.4
TRIM23-204ENST00000505205 DDNO94850 711 aaPredicted RBP12.56□□□□□ -0.4
TRIM23-204ENST00000505205 SLC39A6Q13433 755 aa12.56□□□□□ -0.4
TRIM23-204ENST00000505205 SULT6B1Q6IMI4 303 aa12.56□□□□□ -0.4
TRIM23-204ENST00000505205 BICDL1Q6ZP65 573 aa12.56□□□□□ -0.4
TRIM23-204ENST00000505205 ZNF622Q969S3 477 aaKnown RBP eCLIP12.56□□□□□ -0.4
TRIM23-204ENST00000505205 SLC52A2Q9HAB3 445 aa12.56□□□□□ -0.4
TRIM23-204ENST00000505205 SCN7AQ01118 1682 aa12.56□□□□□ -0.4
TRIM23-204ENST00000505205 UBR2Q8IWV8 1755 aa12.56□□□□□ -0.4
TRIM23-204ENST00000505205 CCDC24Q8N4L8 307 aa12.55□□□□□ -0.4
TRIM23-204ENST00000505205 POLR3GLQ9BT43 218 aa12.55□□□□□ -0.4
TRIM23-204ENST00000505205 LGR6Q9HBX8 967 aa12.55□□□□□ -0.4
TRIM23-204ENST00000505205 PASKQ96RG2 1323 aa12.55□□□□□ -0.4
TRIM23-204ENST00000505205 SLX4Q8IY92 1834 aa12.55□□□□□ -0.4
TRIM23-204ENST00000505205 ARFGEF2Q9Y6D5 1785 aa12.54□□□□□ -0.4
TRIM23-204ENST00000505205 CANXP27824 592 aaKnown RBP12.54□□□□□ -0.4
TRIM23-204ENST00000505205 CTCFP49711 727 aaPredicted RBP12.54□□□□□ -0.4
TRIM23-204ENST00000505205 VEGFBP49765 207 aa12.54□□□□□ -0.4
TRIM23-204ENST00000505205 AKAP4Q5JQC9 854 aa12.54□□□□□ -0.4
TRIM23-204ENST00000505205 AIDAQ96BJ3 306 aa12.54□□□□□ -0.4
TRIM23-204ENST00000505205 SCN4AP35499 1836 aa12.53□□□□□ -0.4
TRIM23-204ENST00000505205 LBX1P52954 281 aa12.53□□□□□ -0.4
TRIM23-204ENST00000505205 TBC1D9BQ66K14 1250 aa12.53□□□□□ -0.4
TRIM23-204ENST00000505205 TAOK3Q9H2K8 898 aa12.53□□□□□ -0.4
TRIM23-204ENST00000505205 LTBP3Q9NS15 1303 aa12.53□□□□□ -0.4
TRIM23-204ENST00000505205 RNMTO43148 476 aaKnown RBP12.52□□□□□ -0.41
TRIM23-204ENST00000505205 PDE6BP35913 854 aa12.52□□□□□ -0.41
TRIM23-204ENST00000505205 FAM161AQ3B820 660 aa12.52□□□□□ -0.41
TRIM23-204ENST00000505205 PRR5LQ6MZQ0 368 aa12.52□□□□□ -0.41
TRIM23-204ENST00000505205 LDHDQ86WU2 507 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms