RNA–Protein interactions for RNA: ENST00000505149.1

LINC01088-202, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 624 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-202ENST00000505149 MSX1P28360 303 aa7.4□□□□□ -1.22
LINC01088-202ENST00000505149 PHKA2P46019 1235 aa7.4□□□□□ -1.22
LINC01088-202ENST00000505149 SLC9A9Q8IVB4 645 aa7.4□□□□□ -1.22
LINC01088-202ENST00000505149 TNS4Q8IZW8 715 aa7.4□□□□□ -1.22
LINC01088-202ENST00000505149 GPC6Q9Y625 555 aaPredicted RBP7.4□□□□□ -1.22
LINC01088-202ENST00000505149 SFI1A8K8P3 1242 aa7.39□□□□□ -1.23
LINC01088-202ENST00000505149 ATG7O95352 703 aa7.39□□□□□ -1.23
LINC01088-202ENST00000505149 THBS1P07996 1170 aa7.39□□□□□ -1.23
LINC01088-202ENST00000505149 PLA2G4AP47712 749 aa7.39□□□□□ -1.23
LINC01088-202ENST00000505149 PSMA6P60900 246 aaKnown RBP7.39□□□□□ -1.23
LINC01088-202ENST00000505149 INSM1Q01101 510 aaPredicted RBP7.39□□□□□ -1.23
LINC01088-202ENST00000505149 DPYDQ12882 1025 aa7.39□□□□□ -1.23
LINC01088-202ENST00000505149 UBAP2LQ14157 1087 aaKnown RBP7.39□□□□□ -1.23
LINC01088-202ENST00000505149 NBPF1Q3BBV0 1214 aa7.39□□□□□ -1.23
LINC01088-202ENST00000505149 ZDHHC1Q8WTX9 485 aa7.39□□□□□ -1.23
LINC01088-202ENST00000505149 GAS2L1Q99501 681 aaPredicted RBP7.39□□□□□ -1.23
LINC01088-202ENST00000505149 NOS2P35228 1153 aa7.38□□□□□ -1.23
LINC01088-202ENST00000505149 FOXR1Q6PIV2 292 aa7.38□□□□□ -1.23
LINC01088-202ENST00000505149 RIPOR1Q6ZS17 1223 aa7.38□□□□□ -1.23
LINC01088-202ENST00000505149 NLRP8Q86W28 1048 aa7.38□□□□□ -1.23
LINC01088-202ENST00000505149 TSEN2Q8NCE0 465 aaKnown RBP7.38□□□□□ -1.23
LINC01088-202ENST00000505149 PBXIP1Q96AQ6 731 aa7.38□□□□□ -1.23
LINC01088-202ENST00000505149 NUCKS1Q9H1E3 243 aaKnown RBP7.38□□□□□ -1.23
LINC01088-202ENST00000505149 TSPAN10Q9H1Z9 355 aaPredicted RBP7.38□□□□□ -1.23
LINC01088-202ENST00000505149 C1orf115Q9H7X2 142 aa7.38□□□□□ -1.23
LINC01088-202ENST00000505149 CABP1Q9NZU7 370 aa7.38□□□□□ -1.23
LINC01088-202ENST00000505149 CDC14CA4D256 554 aa7.37□□□□□ -1.23
LINC01088-202ENST00000505149 ARID3CA6NKF2 412 aa7.37□□□□□ -1.23
LINC01088-202ENST00000505149 EML1O00423 815 aa7.37□□□□□ -1.23
LINC01088-202ENST00000505149 C21orf2O43822 256 aa7.37□□□□□ -1.23
LINC01088-202ENST00000505149 CSB-PGBD3P0DP91 1061 aa7.37□□□□□ -1.23
LINC01088-202ENST00000505149 KRT76Q01546 638 aa7.37□□□□□ -1.23
LINC01088-202ENST00000505149 SWI5Q1ZZU3 235 aa7.37□□□□□ -1.23
LINC01088-202ENST00000505149 C1orf53Q5VUE5 145 aa7.37□□□□□ -1.23
LINC01088-202ENST00000505149 PGBD3Q8N328 593 aa7.37□□□□□ -1.23
LINC01088-202ENST00000505149 L3MBTL2Q969R5 705 aa7.37□□□□□ -1.23
LINC01088-202ENST00000505149 CFHR5Q9BXR6 569 aa7.37□□□□□ -1.23
LINC01088-202ENST00000505149 COL25A1Q9BXS0 654 aaPredicted RBP7.37□□□□□ -1.23
LINC01088-202ENST00000505149 STK17AQ9UEE5 414 aa7.37□□□□□ -1.23
LINC01088-202ENST00000505149 SERTM1A2A2V5 107 aa7.36□□□□□ -1.23
LINC01088-202ENST00000505149 TATP17735 454 aaPredicted RBP7.36□□□□□ -1.23
LINC01088-202ENST00000505149 IGFBP4P22692 258 aa7.36□□□□□ -1.23
LINC01088-202ENST00000505149 LORP23490 312 aaPredicted RBP7.36□□□□□ -1.23
LINC01088-202ENST00000505149 GAS6Q14393 721 aa7.36□□□□□ -1.23
LINC01088-202ENST00000505149 EFHC2Q5JST6 749 aa7.36□□□□□ -1.23
LINC01088-202ENST00000505149 CCDC82Q8N4S0 544 aa7.36□□□□□ -1.23
LINC01088-202ENST00000505149 C7orf43Q8WVR3 580 aa7.36□□□□□ -1.23
LINC01088-202ENST00000505149 NDFIP2Q9NV92 336 aa7.36□□□□□ -1.23
LINC01088-202ENST00000505149 NOVA2Q9UNW9 492 aaKnown RBP7.36□□□□□ -1.23
LINC01088-202ENST00000505149 ACIN1Q9UKV3 1341 aaKnown RBP7.35□□□□□ -1.23
LINC01088-202ENST00000505149 PPP1R15AO75807 674 aaPredicted RBP7.35□□□□□ -1.23
LINC01088-202ENST00000505149 SLURP2P0DP57 97 aa7.35□□□□□ -1.23
LINC01088-202ENST00000505149 RFX1P22670 979 aa7.35□□□□□ -1.23
LINC01088-202ENST00000505149 RNFT1Q5M7Z0 435 aa7.35□□□□□ -1.23
LINC01088-202ENST00000505149 FIGNL1Q6PIW4 674 aa7.35□□□□□ -1.23
LINC01088-202ENST00000505149 FAM200AQ8TCP9 573 aa7.35□□□□□ -1.23
LINC01088-202ENST00000505149 TRERF1Q96PN7 1200 aa7.35□□□□□ -1.23
LINC01088-202ENST00000505149 C2orf49Q9BVC5 232 aaPredicted RBP7.35□□□□□ -1.23
LINC01088-202ENST00000505149 GPAMQ9HCL2 828 aa7.35□□□□□ -1.23
LINC01088-202ENST00000505149 ZMIZ1Q9ULJ6 1067 aa7.35□□□□□ -1.23
LINC01088-202ENST00000505149 CHMP3Q9Y3E7 222 aa7.35□□□□□ -1.23
LINC01088-202ENST00000505149 ATAD2Q6PL18 1390 aa7.34□□□□□ -1.23
LINC01088-202ENST00000505149 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.34□□□□□ -1.23
LINC01088-202ENST00000505149 WEE1P30291 646 aa7.34□□□□□ -1.23
LINC01088-202ENST00000505149 SRSF11Q05519 484 aaKnown RBP7.34□□□□□ -1.23
LINC01088-202ENST00000505149 SAMD5Q5TGI4 173 aa7.34□□□□□ -1.23
LINC01088-202ENST00000505149 GTPBP3Q969Y2 492 aaKnown RBP7.34□□□□□ -1.23
LINC01088-202ENST00000505149 RUBCNLQ9H714 662 aa7.34□□□□□ -1.23
LINC01088-202ENST00000505149 MBIPQ9NS73 344 aa7.34□□□□□ -1.23
LINC01088-202ENST00000505149 PHF24Q9UPV7 400 aa7.34□□□□□ -1.23
LINC01088-202ENST00000505149 TXLNAP40222 546 aa7.33□□□□□ -1.24
LINC01088-202ENST00000505149 FAM69CQ0P6D2 419 aa7.33□□□□□ -1.24
LINC01088-202ENST00000505149 AIDAQ96BJ3 306 aa7.33□□□□□ -1.24
LINC01088-202ENST00000505149 ZIC5Q96T25 663 aa7.33□□□□□ -1.24
LINC01088-202ENST00000505149 ATXN7L1Q9ULK2 861 aaPredicted RBP7.33□□□□□ -1.24
LINC01088-202ENST00000505149 A0A1W2PNR3 127 aa7.32□□□□□ -1.24
LINC01088-202ENST00000505149 FOXO3O43524 673 aa7.32□□□□□ -1.24
LINC01088-202ENST00000505149 PPP1R12BO60237 982 aaPredicted RBP7.32□□□□□ -1.24
LINC01088-202ENST00000505149 TBCELQ5QJ74 424 aa7.32□□□□□ -1.24
LINC01088-202ENST00000505149 ZSCAN1Q8NBB4 408 aa7.32□□□□□ -1.24
LINC01088-202ENST00000505149 SCG3Q8WXD2 468 aaKnown RBP7.32□□□□□ -1.24
LINC01088-202ENST00000505149 CNTNAP3BQ96NU0 1288 aa7.32□□□□□ -1.24
LINC01088-202ENST00000505149 CNTNAP3Q9BZ76 1288 aa7.32□□□□□ -1.24
LINC01088-202ENST00000505149 TIMELESSQ9UNS1 1208 aa7.32□□□□□ -1.24
LINC01088-202ENST00000505149 PCDHGC4Q9Y5F7 938 aa7.32□□□□□ -1.24
LINC01088-202ENST00000505149 PARP3Q9Y6F1 533 aa7.32□□□□□ -1.24
LINC01088-202ENST00000505149 FAM157BP0CG42 384 aa7.31□□□□□ -1.24
LINC01088-202ENST00000505149 CDCA8Q53HL2 280 aa7.31□□□□□ -1.24
LINC01088-202ENST00000505149 HINFPQ9BQA5 517 aa7.31□□□□□ -1.24
LINC01088-202ENST00000505149 ZNF232Q9UNY5 417 aa7.31□□□□□ -1.24
LINC01088-202ENST00000505149 LAMC2Q13753 1193 aa7.3□□□□□ -1.24
LINC01088-202ENST00000505149 ARSJQ5FYB0 599 aaPredicted RBP7.3□□□□□ -1.24
LINC01088-202ENST00000505149 FAM182BQ5T319 152 aa7.3□□□□□ -1.24
LINC01088-202ENST00000505149 SH3PXD2AQ5TCZ1 1133 aa7.3□□□□□ -1.24
LINC01088-202ENST00000505149 ZCCHC2Q9C0B9 1178 aaKnown RBP7.3□□□□□ -1.24
LINC01088-202ENST00000505149 LRRC4BQ9NT99 713 aa7.3□□□□□ -1.24
LINC01088-202ENST00000505149 GPR25O00155 361 aa7.29□□□□□ -1.24
LINC01088-202ENST00000505149 BNIP3LO60238 219 aa7.29□□□□□ -1.24
LINC01088-202ENST00000505149 OCLNQ16625 522 aa7.29□□□□□ -1.24
LINC01088-202ENST00000505149 HIF1AQ16665 826 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms