RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 ZNF496Q96IT1 587 aaPredicted RBP10.86□□□□□ -0.67
CDC42SE2-208ENST00000505065 ATP10DQ9P241 1426 aa10.86□□□□□ -0.67
CDC42SE2-208ENST00000505065 LOC102724428A0A0B4J2F2 783 aa10.86□□□□□ -0.67
CDC42SE2-208ENST00000505065 SIK1P57059 783 aa10.86□□□□□ -0.67
CDC42SE2-208ENST00000505065 RNF123Q5XPI4 1314 aa10.86□□□□□ -0.67
CDC42SE2-208ENST00000505065 SOCS7O14512 581 aa10.85□□□□□ -0.67
CDC42SE2-208ENST00000505065 RTF1Q92541 710 aaKnown RBP10.85□□□□□ -0.67
CDC42SE2-208ENST00000505065 FMNL2Q96PY5 1086 aa10.84□□□□□ -0.67
CDC42SE2-208ENST00000505065 TEX13AQ9BXU3 409 aaPredicted RBP10.84□□□□□ -0.67
CDC42SE2-208ENST00000505065 GOLGA2Q08379 1002 aa10.84□□□□□ -0.67
CDC42SE2-208ENST00000505065 TXNRD1Q16881 649 aa10.84□□□□□ -0.67
CDC42SE2-208ENST00000505065 ACSBG1Q96GR2 724 aa10.84□□□□□ -0.67
CDC42SE2-208ENST00000505065 VAMP4O75379 141 aa10.84□□□□□ -0.67
CDC42SE2-208ENST00000505065 NEFMP07197 916 aa10.84□□□□□ -0.67
CDC42SE2-208ENST00000505065 AMIGO3Q86WK7 504 aa10.83□□□□□ -0.68
CDC42SE2-208ENST00000505065 SNRPA1P09661 255 aaKnown RBP10.82□□□□□ -0.68
CDC42SE2-208ENST00000505065 TEFQ10587 303 aa10.82□□□□□ -0.68
CDC42SE2-208ENST00000505065 ADRA2BP18089 450 aa10.82□□□□□ -0.68
CDC42SE2-208ENST00000505065 EIF5P55010 431 aaKnown RBP10.82□□□□□ -0.68
CDC42SE2-208ENST00000505065 C8orf58Q8NAV2 365 aa10.82□□□□□ -0.68
CDC42SE2-208ENST00000505065 ARAP2Q8WZ64 1704 aa10.82□□□□□ -0.68
CDC42SE2-208ENST00000505065 NBPF26B4DH59 902 aa10.82□□□□□ -0.68
CDC42SE2-208ENST00000505065 ZNF827Q17R98 1081 aa10.82□□□□□ -0.68
CDC42SE2-208ENST00000505065 NBPF14Q5TI25 921 aa10.82□□□□□ -0.68
CDC42SE2-208ENST00000505065 NBPF10Q6P3W6 841 aaKnown RBP10.82□□□□□ -0.68
CDC42SE2-208ENST00000505065 NBPF15Q8N660 670 aa10.82□□□□□ -0.68
CDC42SE2-208ENST00000505065 COL15A1P39059 1388 aa10.82□□□□□ -0.68
CDC42SE2-208ENST00000505065 EZH2Q15910 746 aaKnown RBP10.81□□□□□ -0.68
CDC42SE2-208ENST00000505065 ALDH1L2Q3SY69 923 aa10.81□□□□□ -0.68
CDC42SE2-208ENST00000505065 MYH16Q9H6N6 1097 aa10.81□□□□□ -0.68
CDC42SE2-208ENST00000505065 PNPLA7Q6ZV29 1317 aa10.81□□□□□ -0.68
CDC42SE2-208ENST00000505065 SLC39A6Q13433 755 aa10.81□□□□□ -0.68
CDC42SE2-208ENST00000505065 KAT6BQ8WYB5 2073 aa10.81□□□□□ -0.68
CDC42SE2-208ENST00000505065 SSFA2P28290 1259 aa10.81□□□□□ -0.68
CDC42SE2-208ENST00000505065 PRAMEF22A3QJZ6 481 aa10.8□□□□□ -0.68
CDC42SE2-208ENST00000505065 ANO8Q9HCE9 1232 aaPredicted RBP10.8□□□□□ -0.68
CDC42SE2-208ENST00000505065 TSPYL4Q9UJ04 414 aa10.8□□□□□ -0.68
CDC42SE2-208ENST00000505065 IL6STP40189 918 aaPredicted RBP10.8□□□□□ -0.68
CDC42SE2-208ENST00000505065 TSPYL6Q8N831 410 aa10.8□□□□□ -0.68
CDC42SE2-208ENST00000505065 CDCA7LQ96GN5 454 aa10.8□□□□□ -0.68
CDC42SE2-208ENST00000505065 SGIP1Q9BQI5 828 aa10.8□□□□□ -0.68
CDC42SE2-208ENST00000505065 APBA3O96018 575 aa10.8□□□□□ -0.68
CDC42SE2-208ENST00000505065 RPS6KA4O75676 772 aa10.79□□□□□ -0.68
CDC42SE2-208ENST00000505065 BAG6P46379 1132 aa10.79□□□□□ -0.68
CDC42SE2-208ENST00000505065 ADCY9O60503 1353 aa10.79□□□□□ -0.68
CDC42SE2-208ENST00000505065 CRKLP46109 303 aaKnown RBP10.79□□□□□ -0.68
CDC42SE2-208ENST00000505065 USP16Q9Y5T5 823 aa10.79□□□□□ -0.68
CDC42SE2-208ENST00000505065 DNAJC10Q8IXB1 793 aa10.78□□□□□ -0.68
CDC42SE2-208ENST00000505065 TSR2Q969E8 191 aaKnown RBP10.78□□□□□ -0.68
CDC42SE2-208ENST00000505065 MIS18AQ9NYP9 233 aa10.78□□□□□ -0.68
CDC42SE2-208ENST00000505065 CCNL1Q9UK58 526 aaPredicted RBP10.78□□□□□ -0.68
CDC42SE2-208ENST00000505065 EN1Q05925 392 aaPredicted RBP10.78□□□□□ -0.68
CDC42SE2-208ENST00000505065 DDX21Q9NR30 783 aaKnown RBP eCLIP10.78□□□□□ -0.68
CDC42SE2-208ENST00000505065 CCDC87Q9NVE4 849 aa10.78□□□□□ -0.68
CDC42SE2-208ENST00000505065 PSME4Q14997 1843 aa10.78□□□□□ -0.68
CDC42SE2-208ENST00000505065 SPEF2Q9C093 1822 aa10.77□□□□□ -0.68
CDC42SE2-208ENST00000505065 BCL2L12Q9HB09 334 aa10.77□□□□□ -0.68
CDC42SE2-208ENST00000505065 COL4A1P02462 1669 aa10.77□□□□□ -0.68
CDC42SE2-208ENST00000505065 C10orf71Q711Q0 1435 aa10.77□□□□□ -0.69
CDC42SE2-208ENST00000505065 KRT24Q2M2I5 525 aa10.77□□□□□ -0.69
CDC42SE2-208ENST00000505065 MRPL50Q8N5N7 158 aaKnown RBP10.77□□□□□ -0.69
CDC42SE2-208ENST00000505065 SLC15A2Q16348 729 aa10.77□□□□□ -0.69
CDC42SE2-208ENST00000505065 USP42Q9H9J4 1324 aaKnown RBP10.77□□□□□ -0.69
CDC42SE2-208ENST00000505065 ERVV-1B6SEH8 477 aa10.77□□□□□ -0.69
CDC42SE2-208ENST00000505065 FER1L6Q2WGJ9 1857 aa10.76□□□□□ -0.69
CDC42SE2-208ENST00000505065 EXOSC9Q06265 439 aaKnown RBP10.76□□□□□ -0.69
CDC42SE2-208ENST00000505065 CAMTA2O94983 1202 aa10.76□□□□□ -0.69
CDC42SE2-208ENST00000505065 ATP6V1AP38606 617 aa10.76□□□□□ -0.69
CDC42SE2-208ENST00000505065 DEFB132Q7Z7B7 95 aa10.76□□□□□ -0.69
CDC42SE2-208ENST00000505065 CACNA1SQ13698 1873 aa10.76□□□□□ -0.69
CDC42SE2-208ENST00000505065 ARHGAP45Q92619 1136 aa10.76□□□□□ -0.69
CDC42SE2-208ENST00000505065 TTC5Q8N0Z6 440 aa10.75□□□□□ -0.69
CDC42SE2-208ENST00000505065 DICER1Q9UPY3 1922 aaKnown RBP10.75□□□□□ -0.69
CDC42SE2-208ENST00000505065 UTYO14607 1347 aa10.75□□□□□ -0.69
CDC42SE2-208ENST00000505065 RARSP54136 660 aaKnown RBP10.75□□□□□ -0.69
CDC42SE2-208ENST00000505065 HNRNPUQ00839 825 aaKnown RBP eCLIP10.75□□□□□ -0.69
CDC42SE2-208ENST00000505065 TWISTNBQ3B726 338 aaPredicted RBP10.75□□□□□ -0.69
CDC42SE2-208ENST00000505065 SNED1Q8TER0 1413 aa10.75□□□□□ -0.69
CDC42SE2-208ENST00000505065 CHMP4AQ9BY43 222 aa10.75□□□□□ -0.69
CDC42SE2-208ENST00000505065 ABCC4O15439 1325 aa10.75□□□□□ -0.69
CDC42SE2-208ENST00000505065 FLAD1Q8NFF5 587 aa10.75□□□□□ -0.69
CDC42SE2-208ENST00000505065 ZBTB1Q9Y2K1 713 aa10.75□□□□□ -0.69
CDC42SE2-208ENST00000505065 TM4SF1P30408 202 aa10.74□□□□□ -0.69
CDC42SE2-208ENST00000505065 PROSER3Q2NL68 480 aa10.74□□□□□ -0.69
CDC42SE2-208ENST00000505065 TRIM28Q13263 835 aaKnown RBP10.74□□□□□ -0.69
CDC42SE2-208ENST00000505065 NEUROD2Q15784 382 aa10.74□□□□□ -0.69
CDC42SE2-208ENST00000505065 PTPRCP08575 1304 aa10.74□□□□□ -0.69
CDC42SE2-208ENST00000505065 STARD3NLO95772 234 aa10.74□□□□□ -0.69
CDC42SE2-208ENST00000505065 HYPKQ9NX55 129 aa10.74□□□□□ -0.69
CDC42SE2-208ENST00000505065 DBF4Q9UBU7 674 aaPredicted RBP10.74□□□□□ -0.69
CDC42SE2-208ENST00000505065 NARFQ9UHQ1 456 aa10.74□□□□□ -0.69
CDC42SE2-208ENST00000505065 CLEC4GQ6UXB4 293 aa10.73□□□□□ -0.69
CDC42SE2-208ENST00000505065 SLC16A10Q8TF71 515 aa10.73□□□□□ -0.69
CDC42SE2-208ENST00000505065 A0A0G2JS52 829 aa10.73□□□□□ -0.69
CDC42SE2-208ENST00000505065 MYT1Q01538 1121 aa10.73□□□□□ -0.69
CDC42SE2-208ENST00000505065 CCDC30Q5VVM6 783 aa10.72□□□□□ -0.69
CDC42SE2-208ENST00000505065 MAP3K15Q6ZN16 1313 aa10.72□□□□□ -0.69
CDC42SE2-208ENST00000505065 ZNF34Q8IZ26 560 aa10.72□□□□□ -0.69
CDC42SE2-208ENST00000505065 A0A087WZG4 1122 aa10.72□□□□□ -0.69
CDC42SE2-208ENST00000505065 COL23A1Q86Y22 540 aaPredicted RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms