RNA–Protein interactions for RNA: ENST00000504813.5

CNBP-208, Transcript of CCHC-type zinc finger nucleic acid binding protein, human

APPRIS ALT1 TSL 2 BASIC

Gene CNBP, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNBP-208	ENST00000504813	ZBTB1	Q9Y2K1	713 aa		19.53	■□□□□ 0.72
CNBP-208	ENST00000504813	KCNQ3	O43525	872 aa		19.52	■□□□□ 0.72
CNBP-208	ENST00000504813	SRP68	Q9UHB9	627 aa	Known RBP	19.52	■□□□□ 0.72
CNBP-208	ENST00000504813	N4BP2	Q86UW6	1770 aa	Predicted RBP	19.51	■□□□□ 0.71
CNBP-208	ENST00000504813	COL15A1	P39059	1388 aa		19.51	■□□□□ 0.71
CNBP-208	ENST00000504813	CCER2	I3L3R5	266 aa		19.51	■□□□□ 0.71
CNBP-208	ENST00000504813	NEFM	P07197	916 aa		19.51	■□□□□ 0.71
CNBP-208	ENST00000504813	FMNL2	Q96PY5	1086 aa		19.51	■□□□□ 0.71
CNBP-208	ENST00000504813	KDM3B	Q7LBC6	1761 aa		19.5	■□□□□ 0.71
CNBP-208	ENST00000504813	STARD3NL	O95772	234 aa		19.5	■□□□□ 0.71
CNBP-208	ENST00000504813	YBX3	P16989	372 aa	Known RBP eCLIP	19.5	■□□□□ 0.71	1e-9	■■□□□ 12.4
CNBP-208	ENST00000504813	FKBP8	Q14318	412 aa		19.5	■□□□□ 0.71
CNBP-208	ENST00000504813	PELP1	Q8IZL8	1130 aa	Known RBP	19.5	■□□□□ 0.71
CNBP-208	ENST00000504813	TEX13A	Q9BXU3	409 aa	Predicted RBP	19.5	■□□□□ 0.71
CNBP-208	ENST00000504813	PNN	Q9H307	717 aa	Known RBP	19.5	■□□□□ 0.71
CNBP-208	ENST00000504813	NFE2L2	Q16236	605 aa		19.48	■□□□□ 0.71
CNBP-208	ENST00000504813	AFDN	P55196	1824 aa	Known RBP	19.48	■□□□□ 0.71
CNBP-208	ENST00000504813	C10orf71	Q711Q0	1435 aa		19.48	■□□□□ 0.71
CNBP-208	ENST00000504813	CANX	P27824	592 aa	Known RBP	19.47	■□□□□ 0.71
CNBP-208	ENST00000504813	BRCA1	P38398	1863 aa	Known RBP	19.47	■□□□□ 0.71
CNBP-208	ENST00000504813	USPL1	Q5W0Q7	1092 aa		19.47	■□□□□ 0.71
CNBP-208	ENST00000504813	PRKRIP1	Q9H875	184 aa	Predicted RBP	19.47	■□□□□ 0.71
CNBP-208	ENST00000504813	NARF	Q9UHQ1	456 aa		19.47	■□□□□ 0.71
CNBP-208	ENST00000504813	PARP3	Q9Y6F1	533 aa		19.47	■□□□□ 0.71
CNBP-208	ENST00000504813	ZPR1	O75312	459 aa		19.46	■□□□□ 0.71
CNBP-208	ENST00000504813	EIF5	P55010	431 aa	Known RBP	19.46	■□□□□ 0.71
CNBP-208	ENST00000504813	TAF7	Q15545	349 aa	Predicted RBP	19.46	■□□□□ 0.71
CNBP-208	ENST00000504813	MAPK8IP3	Q9UPT6	1336 aa		19.46	■□□□□ 0.71
CNBP-208	ENST00000504813	TM4SF1	P30408	202 aa		19.46	■□□□□ 0.71
CNBP-208	ENST00000504813	PXDNL	A1KZ92	1463 aa		19.46	■□□□□ 0.7
CNBP-208	ENST00000504813	SCN7A	Q01118	1682 aa		19.46	■□□□□ 0.7
CNBP-208	ENST00000504813	NRXN2	Q9P2S2	1712 aa		19.45	■□□□□ 0.7
CNBP-208	ENST00000504813	DDR1	Q08345	913 aa		19.45	■□□□□ 0.7
CNBP-208	ENST00000504813	LAMB4	A4D0S4	1761 aa		19.45	■□□□□ 0.7
CNBP-208	ENST00000504813	PRAMEF22	A3QJZ6	481 aa		19.44	■□□□□ 0.7
CNBP-208	ENST00000504813	GRIN3B	O60391	1043 aa		19.44	■□□□□ 0.7
CNBP-208	ENST00000504813	BCL2L12	Q9HB09	334 aa		19.44	■□□□□ 0.7
CNBP-208	ENST00000504813	USP16	Q9Y5T5	823 aa		19.44	■□□□□ 0.7
CNBP-208	ENST00000504813	BCOR	Q6W2J9	1755 aa		19.43	■□□□□ 0.7
CNBP-208	ENST00000504813	A1BG	P04217	495 aa		19.43	■□□□□ 0.7
CNBP-208	ENST00000504813	TGFB2	P61812	414 aa		19.43	■□□□□ 0.7
CNBP-208	ENST00000504813	POLRMT	O00411	1230 aa	Known RBP	19.42	■□□□□ 0.7
CNBP-208	ENST00000504813	SNRPA1	P09661	255 aa	Known RBP	19.42	■□□□□ 0.7
CNBP-208	ENST00000504813	IL6ST	P40189	918 aa	Predicted RBP	19.42	■□□□□ 0.7
CNBP-208	ENST00000504813	MIS18A	Q9NYP9	233 aa		19.42	■□□□□ 0.7
CNBP-208	ENST00000504813	THUMPD2	Q9BTF0	503 aa	Known RBP	19.41	■□□□□ 0.7
CNBP-208	ENST00000504813		A0A087WZG4	1122 aa		19.41	■□□□□ 0.7
CNBP-208	ENST00000504813	NFIX	Q14938	502 aa		19.41	■□□□□ 0.7
CNBP-208	ENST00000504813	WWC3	Q9ULE0	1092 aa		19.41	■□□□□ 0.7
CNBP-208	ENST00000504813	TMPO	P42166	694 aa	Known RBP	19.4	■□□□□ 0.7
CNBP-208	ENST00000504813	PNISR	Q8TF01	805 aa	Known RBP	19.4	■□□□□ 0.7
CNBP-208	ENST00000504813		A0A0G2JLW4	131 aa		19.39	■□□□□ 0.69
CNBP-208	ENST00000504813	RIPK4	P57078	832 aa		19.39	■□□□□ 0.69
CNBP-208	ENST00000504813	ARFGEF1	Q9Y6D6	1849 aa		19.39	■□□□□ 0.69
CNBP-208	ENST00000504813	WDR43	Q15061	677 aa	Known RBP eCLIP	19.38	■□□□□ 0.69
CNBP-208	ENST00000504813	YTHDC1	Q96MU7	727 aa	Known RBP	19.38	■□□□□ 0.69
CNBP-208	ENST00000504813	ADAMTS8	Q9UP79	889 aa		19.38	■□□□□ 0.69
CNBP-208	ENST00000504813	TBC1D2B	Q9UPU7	963 aa		19.38	■□□□□ 0.69
CNBP-208	ENST00000504813	ZNF330	Q9Y3S2	320 aa	Predicted RBP	19.38	■□□□□ 0.69
CNBP-208	ENST00000504813	DPEP1	P16444	411 aa		19.37	■□□□□ 0.69
CNBP-208	ENST00000504813	KCNA3	P22001	575 aa		19.37	■□□□□ 0.69
CNBP-208	ENST00000504813	PIP4K2A	P48426	406 aa	Predicted RBP	19.37	■□□□□ 0.69
CNBP-208	ENST00000504813	CCDC146	Q8IYE0	955 aa		19.37	■□□□□ 0.69
CNBP-208	ENST00000504813	ZNF784	Q8NCA9	323 aa	Predicted RBP	19.37	■□□□□ 0.69
CNBP-208	ENST00000504813	EIF4A1	P60842	406 aa	Known RBP	19.36	■□□□□ 0.69
CNBP-208	ENST00000504813	DLEC1	Q9Y238	1755 aa		19.36	■□□□□ 0.69
CNBP-208	ENST00000504813	CAMTA2	O94983	1202 aa		19.35	■□□□□ 0.69
CNBP-208	ENST00000504813	RUNDC1	Q96C34	613 aa		19.35	■□□□□ 0.69
CNBP-208	ENST00000504813	ANKRD31	Q8N7Z5	1873 aa		19.35	■□□□□ 0.69
CNBP-208	ENST00000504813	NBPF26	B4DH59	902 aa		19.35	■□□□□ 0.69
CNBP-208	ENST00000504813	GIGYF1	O75420	1035 aa	Predicted RBP	19.35	■□□□□ 0.69
CNBP-208	ENST00000504813	SERPINB2	P05120	415 aa		19.35	■□□□□ 0.69
CNBP-208	ENST00000504813	TBC1D9B	Q66K14	1250 aa		19.35	■□□□□ 0.69
CNBP-208	ENST00000504813	NBPF10	Q6P3W6	841 aa	Known RBP	19.35	■□□□□ 0.69
CNBP-208	ENST00000504813	NBPF15	Q8N660	670 aa		19.35	■□□□□ 0.69
CNBP-208	ENST00000504813	LMOD3	Q0VAK6	560 aa		19.34	■□□□□ 0.69
CNBP-208	ENST00000504813	NPM2	Q86SE8	214 aa	Known RBP	19.34	■□□□□ 0.69
CNBP-208	ENST00000504813	DZIP3	Q86Y13	1208 aa	Known RBP	19.34	■□□□□ 0.69
CNBP-208	ENST00000504813	RRP7A	Q9Y3A4	280 aa	Known RBP	19.34	■□□□□ 0.69
CNBP-208	ENST00000504813	BICDL1	Q6ZP65	573 aa		19.33	■□□□□ 0.68
CNBP-208	ENST00000504813	BCS1L	Q9Y276	419 aa		19.32	■□□□□ 0.68
CNBP-208	ENST00000504813	CENPB	P07199	599 aa	Predicted RBP	19.31	■□□□□ 0.68
CNBP-208	ENST00000504813	NEUROD2	Q15784	382 aa		19.31	■□□□□ 0.68
CNBP-208	ENST00000504813	BABAM1	Q9NWV8	329 aa		19.31	■□□□□ 0.68
CNBP-208	ENST00000504813	TSPYL4	Q9UJ04	414 aa		19.31	■□□□□ 0.68
CNBP-208	ENST00000504813	TRIM35	Q9UPQ4	493 aa		19.31	■□□□□ 0.68
CNBP-208	ENST00000504813	CHRNA5	P30532	468 aa		19.3	■□□□□ 0.68
CNBP-208	ENST00000504813	PIM2	Q9P1W9	311 aa		19.3	■□□□□ 0.68
CNBP-208	ENST00000504813	NUP98	P52948	1817 aa		19.3	■□□□□ 0.68
CNBP-208	ENST00000504813	CARMIL3	Q8ND23	1372 aa		19.3	■□□□□ 0.68
CNBP-208	ENST00000504813	MRS2	Q9HD23	443 aa		19.3	■□□□□ 0.68
CNBP-208	ENST00000504813	CLEC4G	Q6UXB4	293 aa		19.29	■□□□□ 0.68
CNBP-208	ENST00000504813	ADCY9	O60503	1353 aa		19.28	■□□□□ 0.68
CNBP-208	ENST00000504813	COL11A2	P13942	1736 aa	Predicted RBP	19.28	■□□□□ 0.68
CNBP-208	ENST00000504813	CCDC184	Q52MB2	194 aa		19.28	■□□□□ 0.68
CNBP-208	ENST00000504813	SETDB2	Q96T68	719 aa		19.28	■□□□□ 0.68
CNBP-208	ENST00000504813	RGL2	O15211	777 aa		19.27	■□□□□ 0.68
CNBP-208	ENST00000504813	PRR5L	Q6MZQ0	368 aa		19.27	■□□□□ 0.68
CNBP-208	ENST00000504813	DALRD3	Q5D0E6	543 aa	Known RBP	19.26	■□□□□ 0.67
CNBP-208	ENST00000504813	SBF1	O95248	1867 aa		19.26	■□□□□ 0.67

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