RNA–Protein interactions for RNA: ENST00000504782.5

RNF4-206, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-206ENST00000504782 COL15A1P39059 1388 aa17.15■□□□□ 0.34
RNF4-206ENST00000504782 CEMIPQ8WUJ3 1361 aa17.15■□□□□ 0.34
RNF4-206ENST00000504782 CANXP27824 592 aaKnown RBP17.15■□□□□ 0.34
RNF4-206ENST00000504782 C1QTNF8P60827 252 aa17.15■□□□□ 0.34
RNF4-206ENST00000504782 TEFQ10587 303 aa17.15■□□□□ 0.34
RNF4-206ENST00000504782 ZNF790Q6PG37 636 aa17.15■□□□□ 0.34
RNF4-206ENST00000504782 VSIG10Q8N0Z9 540 aa17.15■□□□□ 0.34
RNF4-206ENST00000504782 BCL2L12Q9HB09 334 aa17.15■□□□□ 0.34
RNF4-206ENST00000504782 ADCY9O60503 1353 aa17.15■□□□□ 0.34
RNF4-206ENST00000504782 POLRMTO00411 1230 aaKnown RBP17.14■□□□□ 0.33
RNF4-206ENST00000504782 TTC5Q8N0Z6 440 aa17.14■□□□□ 0.33
RNF4-206ENST00000504782 BCS1LQ9Y276 419 aa17.14■□□□□ 0.33
RNF4-206ENST00000504782 HEG1Q9ULI3 1381 aa17.14■□□□□ 0.33
RNF4-206ENST00000504782 DLG5Q8TDM6 1919 aa17.13■□□□□ 0.33
RNF4-206ENST00000504782 ZPR1O75312 459 aa17.13■□□□□ 0.33
RNF4-206ENST00000504782 DCTN1Q14203 1278 aa17.13■□□□□ 0.33
RNF4-206ENST00000504782 MCM10Q7L590 875 aa17.13■□□□□ 0.33
RNF4-206ENST00000504782 ZNF526Q8TF50 670 aaPredicted RBP17.13■□□□□ 0.33
RNF4-206ENST00000504782 NARFQ9UHQ1 456 aa17.13■□□□□ 0.33
RNF4-206ENST00000504782 NUDCQ9Y266 331 aa17.13■□□□□ 0.33
RNF4-206ENST00000504782 NRXN2Q9P2S2 1712 aa17.13■□□□□ 0.33
RNF4-206ENST00000504782 ARFGEF1Q9Y6D6 1849 aa17.12■□□□□ 0.33
RNF4-206ENST00000504782 CHRNA5P30532 468 aa17.12■□□□□ 0.33
RNF4-206ENST00000504782 NFIXQ14938 502 aa17.12■□□□□ 0.33
RNF4-206ENST00000504782 PRAMEF22A3QJZ6 481 aa17.11■□□□□ 0.33
RNF4-206ENST00000504782 GIGYF1O75420 1035 aaPredicted RBP17.11■□□□□ 0.33
RNF4-206ENST00000504782 BTBD11A6QL63 1104 aa17.1■□□□□ 0.33
RNF4-206ENST00000504782 FCHSD2O94868 740 aa17.1■□□□□ 0.33
RNF4-206ENST00000504782 A1BGP04217 495 aa17.1■□□□□ 0.33
RNF4-206ENST00000504782 EIF5P55010 431 aaKnown RBP17.1■□□□□ 0.33
RNF4-206ENST00000504782 STARD3NLO95772 234 aa17.09■□□□□ 0.33
RNF4-206ENST00000504782 SCN7AQ01118 1682 aa17.08■□□□□ 0.32
RNF4-206ENST00000504782 PIP4K2AP48426 406 aaPredicted RBP17.08■□□□□ 0.32
RNF4-206ENST00000504782 BICDL1Q6ZP65 573 aa17.08■□□□□ 0.32
RNF4-206ENST00000504782 ARHGAP27Q6ZUM4 889 aa17.08■□□□□ 0.32
RNF4-206ENST00000504782 FMNL2Q96PY5 1086 aa17.08■□□□□ 0.32
RNF4-206ENST00000504782 TBC1D2BQ9UPU7 963 aa17.08■□□□□ 0.32
RNF4-206ENST00000504782 ZNF330Q9Y3S2 320 aaPredicted RBP17.08■□□□□ 0.32
RNF4-206ENST00000504782 USP16Q9Y5T5 823 aa17.08■□□□□ 0.32
RNF4-206ENST00000504782 CARMIL3Q8ND23 1372 aa17.07■□□□□ 0.32
RNF4-206ENST00000504782 SERPINB2P05120 415 aa17.07■□□□□ 0.32
RNF4-206ENST00000504782 PIM2Q9P1W9 311 aa17.07■□□□□ 0.32
RNF4-206ENST00000504782 ANKRD31Q8N7Z5 1873 aa17.07■□□□□ 0.32
RNF4-206ENST00000504782 DLEC1Q9Y238 1755 aa17.07■□□□□ 0.32
RNF4-206ENST00000504782 SENP3-EIF4A1A0A087X0R7 540 aa17.06■□□□□ 0.32
RNF4-206ENST00000504782 TBC1D9BQ66K14 1250 aa17.06■□□□□ 0.32
RNF4-206ENST00000504782 GPBP1L1Q9HC44 474 aaPredicted RBP17.06■□□□□ 0.32
RNF4-206ENST00000504782 MIS18AQ9NYP9 233 aa17.06■□□□□ 0.32
RNF4-206ENST00000504782 BCORQ6W2J9 1755 aa17.05■□□□□ 0.32
RNF4-206ENST00000504782 CCDC24Q8N4L8 307 aa17.05■□□□□ 0.32
RNF4-206ENST00000504782 RTF1Q92541 710 aaKnown RBP17.05■□□□□ 0.32
RNF4-206ENST00000504782 PLEKHF1Q96S99 279 aa17.05■□□□□ 0.32
RNF4-206ENST00000504782 TEX13AQ9BXU3 409 aaPredicted RBP17.05■□□□□ 0.32
RNF4-206ENST00000504782 SBF1O95248 1867 aa17.05■□□□□ 0.32
RNF4-206ENST00000504782 IL6STP40189 918 aaPredicted RBP17.03■□□□□ 0.32
RNF4-206ENST00000504782 DALRD3Q5D0E6 543 aaKnown RBP17.03■□□□□ 0.32
RNF4-206ENST00000504782 KDM3BQ7LBC6 1761 aa17.02■□□□□ 0.32
RNF4-206ENST00000504782 A0A087WZG4 1122 aa17.02■□□□□ 0.32
RNF4-206ENST00000504782 CAMTA2O94983 1202 aa17.02■□□□□ 0.32
RNF4-206ENST00000504782 THUMPD2Q9BTF0 503 aaKnown RBP17.02■□□□□ 0.32
RNF4-206ENST00000504782 COL11A2P13942 1736 aaPredicted RBP17.01■□□□□ 0.31
RNF4-206ENST00000504782 HTATSF1O43719 755 aaKnown RBP17.01■□□□□ 0.31
RNF4-206ENST00000504782 DDX10Q13206 875 aaKnown RBP17.01■□□□□ 0.31
RNF4-206ENST00000504782 CCDC88AQ3V6T2 1871 aa17.01■□□□□ 0.31
RNF4-206ENST00000504782 NBPF26B4DH59 902 aa17■□□□□ 0.31
RNF4-206ENST00000504782 KIF3CO14782 793 aa17■□□□□ 0.31
RNF4-206ENST00000504782 SNRPA1P09661 255 aaKnown RBP17■□□□□ 0.31
RNF4-206ENST00000504782 TAF7Q15545 349 aaPredicted RBP17■□□□□ 0.31
RNF4-206ENST00000504782 C9orf131Q5VYM1 1079 aa17■□□□□ 0.31
RNF4-206ENST00000504782 NBPF10Q6P3W6 841 aaKnown RBP17■□□□□ 0.31
RNF4-206ENST00000504782 NBPF15Q8N660 670 aa17■□□□□ 0.31
RNF4-206ENST00000504782 LAMB4A4D0S4 1761 aa17■□□□□ 0.31
RNF4-206ENST00000504782 CACNA1SQ13698 1873 aa16.99■□□□□ 0.31
RNF4-206ENST00000504782 DZIP3Q86Y13 1208 aaKnown RBP16.99■□□□□ 0.31
RNF4-206ENST00000504782 C2CD5Q86YS7 1000 aa16.99■□□□□ 0.31
RNF4-206ENST00000504782 PRELPP51888 382 aa16.98■□□□□ 0.31
RNF4-206ENST00000504782 RASSF7Q02833 373 aa16.98■□□□□ 0.31
RNF4-206ENST00000504782 NFE2L2Q16236 605 aa16.98■□□□□ 0.31
RNF4-206ENST00000504782 PRR5LQ6MZQ0 368 aa16.98■□□□□ 0.31
RNF4-206ENST00000504782 NMRK2Q9NPI5 230 aa16.97■□□□□ 0.31
RNF4-206ENST00000504782 RNF181Q9P0P0 153 aa16.96■□□□□ 0.31
RNF4-206ENST00000504782 H0YIN7 160 aa16.95■□□□□ 0.3
RNF4-206ENST00000504782 TTLL6Q8N841 843 aa16.95■□□□□ 0.3
RNF4-206ENST00000504782 SETDB2Q96T68 719 aa16.95■□□□□ 0.3
RNF4-206ENST00000504782 SLX4Q8IY92 1834 aa16.94■□□□□ 0.3
RNF4-206ENST00000504782 RALBP1Q15311 655 aa16.94■□□□□ 0.3
RNF4-206ENST00000504782 BRIP1Q9BX63 1249 aa16.94■□□□□ 0.3
RNF4-206ENST00000504782 NEFMP07197 916 aa16.93■□□□□ 0.3
RNF4-206ENST00000504782 EIF4A1P60842 406 aaKnown RBP16.93■□□□□ 0.3
RNF4-206ENST00000504782 HLFQ16534 295 aa16.93■□□□□ 0.3
RNF4-206ENST00000504782 NPM2Q86SE8 214 aaKnown RBP16.93■□□□□ 0.3
RNF4-206ENST00000504782 NGEFQ8N5V2 710 aa16.93■□□□□ 0.3
RNF4-206ENST00000504782 ZNF622Q969S3 477 aaKnown RBP eCLIP16.93■□□□□ 0.3
RNF4-206ENST00000504782 ZNF219Q9P2Y4 722 aaPredicted RBP16.93■□□□□ 0.3
RNF4-206ENST00000504782 NUP98P52948 1817 aa16.93■□□□□ 0.3
RNF4-206ENST00000504782 CNBD1Q8NA66 436 aa16.92■□□□□ 0.3
RNF4-206ENST00000504782 TIAM2Q8IVF5 1701 aa16.92■□□□□ 0.3
RNF4-206ENST00000504782 FER1L6Q2WGJ9 1857 aa16.92■□□□□ 0.3
RNF4-206ENST00000504782 MAPK8IP3Q9UPT6 1336 aa16.92■□□□□ 0.3
RNF4-206ENST00000504782 NFKBIEO00221 500 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms