RNA–Protein interactions for RNA: ENST00000504526.1

TRAPPC11-203, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-203ENST00000504526 KCNQ3O43525 872 aa27.92■■■□□ 2.06
TRAPPC11-203ENST00000504526 LMOD3Q0VAK6 560 aa27.92■■■□□ 2.06
TRAPPC11-203ENST00000504526 MMP10P09238 476 aa27.91■■■□□ 2.06
TRAPPC11-203ENST00000504526 RIPK4P57078 832 aa27.91■■■□□ 2.06
TRAPPC11-203ENST00000504526 RUNDC1Q96C34 613 aa27.91■■■□□ 2.06
TRAPPC11-203ENST00000504526 COL15A1P39059 1388 aa27.9■■■□□ 2.06
TRAPPC11-203ENST00000504526 TMPOP42166 694 aaKnown RBP27.9■■■□□ 2.06
TRAPPC11-203ENST00000504526 ADAMTS8Q9UP79 889 aa27.9■■■□□ 2.06
TRAPPC11-203ENST00000504526 ZPR1O75312 459 aa27.89■■■□□ 2.06
TRAPPC11-203ENST00000504526 SNRPA1P09661 255 aaKnown RBP27.89■■■□□ 2.06
TRAPPC11-203ENST00000504526 CANXP27824 592 aaKnown RBP27.89■■■□□ 2.06
TRAPPC11-203ENST00000504526 NLGN2Q8NFZ4 835 aa27.88■■■□□ 2.05
TRAPPC11-203ENST00000504526 SRP68Q9UHB9 627 aaKnown RBP27.88■■■□□ 2.05
TRAPPC11-203ENST00000504526 A0A087WZG4 1122 aa27.87■■■□□ 2.05
TRAPPC11-203ENST00000504526 EIF5P55010 431 aaKnown RBP27.87■■■□□ 2.05
TRAPPC11-203ENST00000504526 CCDC146Q8IYE0 955 aa27.87■■■□□ 2.05
TRAPPC11-203ENST00000504526 NARFQ9UHQ1 456 aa27.87■■■□□ 2.05
TRAPPC11-203ENST00000504526 PARP3Q9Y6F1 533 aa27.86■■■□□ 2.05
TRAPPC11-203ENST00000504526 ANP32CO43423 234 aa27.85■■■□□ 2.05
TRAPPC11-203ENST00000504526 IL6STP40189 918 aaPredicted RBP27.85■■■□□ 2.05
TRAPPC11-203ENST00000504526 THUMPD2Q9BTF0 503 aaKnown RBP27.85■■■□□ 2.05
TRAPPC11-203ENST00000504526 FKBP8Q14318 412 aa27.84■■■□□ 2.05
TRAPPC11-203ENST00000504526 USPL1Q5W0Q7 1092 aa27.84■■■□□ 2.05
TRAPPC11-203ENST00000504526 NPM2Q86SE8 214 aaKnown RBP27.84■■■□□ 2.05
TRAPPC11-203ENST00000504526 GPR162Q16538 588 aa27.83■■■□□ 2.05
TRAPPC11-203ENST00000504526 MIS18AQ9NYP9 233 aa27.83■■■□□ 2.05
TRAPPC11-203ENST00000504526 USP16Q9Y5T5 823 aa27.83■■■□□ 2.05
TRAPPC11-203ENST00000504526 A1BGP04217 495 aa27.82■■■□□ 2.04
TRAPPC11-203ENST00000504526 BABAM1Q9NWV8 329 aa27.82■■■□□ 2.04
TRAPPC11-203ENST00000504526 KDM3BQ7LBC6 1761 aa27.81■■■□□ 2.04
TRAPPC11-203ENST00000504526 RRP7AQ9Y3A4 280 aaKnown RBP27.8■■■□□ 2.04
TRAPPC11-203ENST00000504526 PRAMEF22A3QJZ6 481 aa27.79■■■□□ 2.04
TRAPPC11-203ENST00000504526 EIF4A1P60842 406 aaKnown RBP27.79■■■□□ 2.04
TRAPPC11-203ENST00000504526 NEUROD2Q15784 382 aa27.79■■■□□ 2.04
TRAPPC11-203ENST00000504526 TM4SF1P30408 202 aa27.78■■■□□ 2.04
TRAPPC11-203ENST00000504526 TSPYL4Q9UJ04 414 aa27.78■■■□□ 2.04
TRAPPC11-203ENST00000504526 ZNF330Q9Y3S2 320 aaPredicted RBP27.78■■■□□ 2.04
TRAPPC11-203ENST00000504526 C10orf71Q711Q0 1435 aa27.77■■■□□ 2.04
TRAPPC11-203ENST00000504526 PELP1Q8IZL8 1130 aaKnown RBP27.77■■■□□ 2.04
TRAPPC11-203ENST00000504526 GIGYF1O75420 1035 aaPredicted RBP27.76■■■□□ 2.03
TRAPPC11-203ENST00000504526 TGFB2P61812 414 aa27.76■■■□□ 2.03
TRAPPC11-203ENST00000504526 BCL2L12Q9HB09 334 aa27.76■■■□□ 2.03
TRAPPC11-203ENST00000504526 DDR1Q08345 913 aa27.75■■■□□ 2.03
TRAPPC11-203ENST00000504526 POLRMTO00411 1230 aaKnown RBP27.74■■■□□ 2.03
TRAPPC11-203ENST00000504526 GRIN3BO60391 1043 aa27.74■■■□□ 2.03
TRAPPC11-203ENST00000504526 TRIM35Q9UPQ4 493 aa27.74■■■□□ 2.03
TRAPPC11-203ENST00000504526 KIF13BQ9NQT8 1826 aa27.74■■■□□ 2.03
TRAPPC11-203ENST00000504526 NFIXQ14938 502 aa27.73■■■□□ 2.03
TRAPPC11-203ENST00000504526 TBC1D2BQ9UPU7 963 aa27.73■■■□□ 2.03
TRAPPC11-203ENST00000504526 YY1P25490 414 aa27.72■■■□□ 2.03
TRAPPC11-203ENST00000504526 CCDC184Q52MB2 194 aa27.72■■■□□ 2.03
TRAPPC11-203ENST00000504526 DZIP3Q86Y13 1208 aaKnown RBP27.72■■■□□ 2.03
TRAPPC11-203ENST00000504526 LAMB4A4D0S4 1761 aa27.72■■■□□ 2.03
TRAPPC11-203ENST00000504526 MRS2Q9HD23 443 aa27.71■■■□□ 2.03
TRAPPC11-203ENST00000504526 APAF1O14727 1248 aa27.7■■■□□ 2.02
TRAPPC11-203ENST00000504526 SCN7AQ01118 1682 aa27.7■■■□□ 2.02
TRAPPC11-203ENST00000504526 PXDNLA1KZ92 1463 aa27.7■■■□□ 2.02
TRAPPC11-203ENST00000504526 NBPF26B4DH59 902 aa27.69■■■□□ 2.02
TRAPPC11-203ENST00000504526 CAMTA2O94983 1202 aa27.69■■■□□ 2.02
TRAPPC11-203ENST00000504526 YBX3P16989 372 aaKnown RBP eCLIP27.69■■■□□ 2.025e-6■■■□□ 16.5
TRAPPC11-203ENST00000504526 PIP4K2AP48426 406 aaPredicted RBP27.69■■■□□ 2.02
TRAPPC11-203ENST00000504526 NBPF10Q6P3W6 841 aaKnown RBP27.69■■■□□ 2.02
TRAPPC11-203ENST00000504526 NBPF15Q8N660 670 aa27.69■■■□□ 2.02
TRAPPC11-203ENST00000504526 CHL1O00533 1208 aa27.68■■■□□ 2.02
TRAPPC11-203ENST00000504526 RGL2O15211 777 aa27.68■■■□□ 2.02
TRAPPC11-203ENST00000504526 ERBB4Q15303 1308 aa27.67■■■□□ 2.02
TRAPPC11-203ENST00000504526 SERPINB2P05120 415 aa27.67■■■□□ 2.02
TRAPPC11-203ENST00000504526 CALD1Q05682 793 aaKnown RBP27.66■■■□□ 2.02
TRAPPC11-203ENST00000504526 CLEC4GQ6UXB4 293 aa27.66■■■□□ 2.02
TRAPPC11-203ENST00000504526 ZNF652Q9Y2D9 606 aa27.66■■■□□ 2.02
TRAPPC11-203ENST00000504526 TBC1D9BQ66K14 1250 aa27.65■■■□□ 2.02
TRAPPC11-203ENST00000504526 BICDL1Q6ZP65 573 aa27.65■■■□□ 2.02
TRAPPC11-203ENST00000504526 CARMIL3Q8ND23 1372 aa27.64■■■□□ 2.02
TRAPPC11-203ENST00000504526 CFAP44Q96MT7 982 aa27.64■■■□□ 2.02
TRAPPC11-203ENST00000504526 LAS1LQ9Y4W2 734 aaKnown RBP27.64■■■□□ 2.02
TRAPPC11-203ENST00000504526 KIAA1551Q9HCM1 1747 aa27.64■■■□□ 2.01
TRAPPC11-203ENST00000504526 A0A0G2JLW4 131 aa27.63■■■□□ 2.01
TRAPPC11-203ENST00000504526 DPEP1P16444 411 aa27.63■■■□□ 2.01
TRAPPC11-203ENST00000504526 SETDB2Q96T68 719 aa27.63■■■□□ 2.01
TRAPPC11-203ENST00000504526 NRXN2Q9P2S2 1712 aa27.63■■■□□ 2.01
TRAPPC11-203ENST00000504526 BCORQ6W2J9 1755 aa27.63■■■□□ 2.01
TRAPPC11-203ENST00000504526 CHD4Q14839 1912 aa27.61■■■□□ 2.01
TRAPPC11-203ENST00000504526 AFDNP55196 1824 aaKnown RBP27.6■■■□□ 2.01
TRAPPC11-203ENST00000504526 N4BP2Q86UW6 1770 aaPredicted RBP27.59■■■□□ 2.01
TRAPPC11-203ENST00000504526 HOXB7P09629 217 aa27.58■■■□□ 2.01
TRAPPC11-203ENST00000504526 EIF2S2P20042 333 aaKnown RBP27.58■■■□□ 2.01
TRAPPC11-203ENST00000504526 GNAI1P63096 354 aa27.58■■■□□ 2.01
TRAPPC11-203ENST00000504526 IFT57Q9NWB7 429 aa27.58■■■□□ 2.01
TRAPPC11-203ENST00000504526 PIM2Q9P1W9 311 aa27.58■■■□□ 2.01
TRAPPC11-203ENST00000504526 WWC3Q9ULE0 1092 aa27.58■■■□□ 2.01
TRAPPC11-203ENST00000504526 ERVV-1B6SEH8 477 aa27.57■■■□□ 2
TRAPPC11-203ENST00000504526 ZNF853P0CG23 659 aa27.57■■■□□ 2
TRAPPC11-203ENST00000504526 MYL6BP14649 208 aa27.57■■■□□ 2
TRAPPC11-203ENST00000504526 KCNA3P22001 575 aa27.57■■■□□ 2
TRAPPC11-203ENST00000504526 NCBP3Q53F19 620 aaKnown RBP27.57■■■□□ 2
TRAPPC11-203ENST00000504526 BCS1LQ9Y276 419 aa27.57■■■□□ 2
TRAPPC11-203ENST00000504526 CCDC27Q2M243 656 aa27.56■■■□□ 2
TRAPPC11-203ENST00000504526 KIF6Q6ZMV9 814 aa27.56■■■□□ 2
TRAPPC11-203ENST00000504526 NGEFQ8N5V2 710 aa27.56■■■□□ 2
TRAPPC11-203ENST00000504526 PDZRN3Q9UPQ7 1066 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms