RNA–Protein interactions for RNA: ENST00000504208.5

KLHL3-204, Transcript of kelch like family member 3, humanhuman

TSL 2

Gene KLHL3, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-204ENST00000504208 CEP85Q6P2H3 762 aa11.9□□□□□ -0.5
KLHL3-204ENST00000504208 SPG7Q9UQ90 795 aa11.9□□□□□ -0.5
KLHL3-204ENST00000504208 HEG1Q9ULI3 1381 aa11.9□□□□□ -0.5
KLHL3-204ENST00000504208 SBF2Q86WG5 1849 aa11.89□□□□□ -0.51
KLHL3-204ENST00000504208 BTBD11A6QL63 1104 aa11.89□□□□□ -0.51
KLHL3-204ENST00000504208 HDGFL1Q5TGJ6 251 aa11.89□□□□□ -0.51
KLHL3-204ENST00000504208 TBC1D32Q96NH3 1257 aa11.89□□□□□ -0.51
KLHL3-204ENST00000504208 THRAP3Q9Y2W1 955 aaKnown RBP11.89□□□□□ -0.51
KLHL3-204ENST00000504208 PAPPAQ13219 1627 aa11.89□□□□□ -0.51
KLHL3-204ENST00000504208 MRC1P22897 1456 aa11.89□□□□□ -0.51
KLHL3-204ENST00000504208 PCDH11XQ9BZA7 1347 aa11.89□□□□□ -0.51
KLHL3-204ENST00000504208 PCDH11YQ9BZA8 1340 aa11.89□□□□□ -0.51
KLHL3-204ENST00000504208 GNAI2P04899 355 aa11.88□□□□□ -0.51
KLHL3-204ENST00000504208 HSP90AB1P08238 724 aaKnown RBP11.88□□□□□ -0.51
KLHL3-204ENST00000504208 BECN1Q14457 450 aa11.88□□□□□ -0.51
KLHL3-204ENST00000504208 G2E3Q7L622 706 aa11.88□□□□□ -0.51
KLHL3-204ENST00000504208 LGR6Q9HBX8 967 aa11.88□□□□□ -0.51
KLHL3-204ENST00000504208 TRPC5Q9UL62 973 aaPredicted RBP11.88□□□□□ -0.51
KLHL3-204ENST00000504208 HDAC5Q9UQL6 1122 aa11.88□□□□□ -0.51
KLHL3-204ENST00000504208 IBTKQ9P2D0 1353 aaPredicted RBP11.88□□□□□ -0.51
KLHL3-204ENST00000504208 KDM6AO15550 1401 aaPredicted RBP11.88□□□□□ -0.51
KLHL3-204ENST00000504208 KAT6BQ8WYB5 2073 aa11.88□□□□□ -0.51
KLHL3-204ENST00000504208 FKBP5Q13451 457 aaPredicted RBP11.88□□□□□ -0.51
KLHL3-204ENST00000504208 BARGINQ6ZT62 677 aa11.88□□□□□ -0.51
KLHL3-204ENST00000504208 LNPKQ9C0E8 428 aa11.88□□□□□ -0.51
KLHL3-204ENST00000504208 FAM98CQ17RN3 349 aaKnown RBP11.87□□□□□ -0.51
KLHL3-204ENST00000504208 MEIS3Q99687 375 aa11.87□□□□□ -0.51
KLHL3-204ENST00000504208 CDCA7Q9BWT1 371 aaPredicted RBP11.87□□□□□ -0.51
KLHL3-204ENST00000504208 C1orf115Q9H7X2 142 aa11.87□□□□□ -0.51
KLHL3-204ENST00000504208 DBF4Q9UBU7 674 aaPredicted RBP11.87□□□□□ -0.51
KLHL3-204ENST00000504208 UBR2Q8IWV8 1755 aa11.86□□□□□ -0.51
KLHL3-204ENST00000504208 NHSQ6T4R5 1651 aa11.86□□□□□ -0.51
KLHL3-204ENST00000504208 ZNF772Q68DY9 489 aaPredicted RBP11.86□□□□□ -0.51
KLHL3-204ENST00000504208 IFNL2Q8IZJ0 200 aa11.86□□□□□ -0.51
KLHL3-204ENST00000504208 ZCRB1Q8TBF4 217 aaKnown RBP11.86□□□□□ -0.51
KLHL3-204ENST00000504208 GJD4Q96KN9 370 aaPredicted RBP11.86□□□□□ -0.51
KLHL3-204ENST00000504208 CACNA1FO60840 1977 aa11.85□□□□□ -0.51
KLHL3-204ENST00000504208 GIGYF1O75420 1035 aaPredicted RBP11.85□□□□□ -0.51
KLHL3-204ENST00000504208 SEC24BO95487 1268 aa11.85□□□□□ -0.51
KLHL3-204ENST00000504208 ATP8B2P98198 1209 aa11.85□□□□□ -0.51
KLHL3-204ENST00000504208 SLC4A10Q6U841 1118 aa11.85□□□□□ -0.51
KLHL3-204ENST00000504208 MPRIPQ6WCQ1 1025 aa11.85□□□□□ -0.51
KLHL3-204ENST00000504208 A0A0G2JS52 829 aa11.84□□□□□ -0.51
KLHL3-204ENST00000504208 CYP27B1O15528 508 aa11.84□□□□□ -0.51
KLHL3-204ENST00000504208 PHKG2P15735 406 aa11.84□□□□□ -0.51
KLHL3-204ENST00000504208 DCAF5Q96JK2 942 aa11.84□□□□□ -0.51
KLHL3-204ENST00000504208 OSBPL3Q9H4L5 887 aa11.84□□□□□ -0.51
KLHL3-204ENST00000504208 QTRT2Q9H974 415 aaKnown RBP11.84□□□□□ -0.51
KLHL3-204ENST00000504208 LAMB4A4D0S4 1761 aa11.84□□□□□ -0.51
KLHL3-204ENST00000504208 C5P01031 1676 aa11.84□□□□□ -0.51
KLHL3-204ENST00000504208 F6X3S4 739 aa11.84□□□□□ -0.51
KLHL3-204ENST00000504208 ALDH1L1O75891 902 aa11.84□□□□□ -0.51
KLHL3-204ENST00000504208 RBM25P49756 843 aaKnown RBP11.84□□□□□ -0.51
KLHL3-204ENST00000504208 DDB1Q16531 1140 aa11.84□□□□□ -0.51
KLHL3-204ENST00000504208 PLEKHM2Q8IWE5 1019 aa11.84□□□□□ -0.51
KLHL3-204ENST00000504208 SRCIN1Q9C0H9 1055 aa11.84□□□□□ -0.51
KLHL3-204ENST00000504208 HYPKQ9NX55 129 aa11.84□□□□□ -0.51
KLHL3-204ENST00000504208 BTAF1O14981 1849 aa11.83□□□□□ -0.52
KLHL3-204ENST00000504208 DNAAF4Q8WXU2 420 aa11.83□□□□□ -0.52
KLHL3-204ENST00000504208 C22orf23Q9BZE7 217 aa11.83□□□□□ -0.52
KLHL3-204ENST00000504208 SLC52A2Q9HAB3 445 aa11.83□□□□□ -0.52
KLHL3-204ENST00000504208 DDX54Q8TDD1 881 aaKnown RBP11.82□□□□□ -0.52
KLHL3-204ENST00000504208 USP44Q9H0E7 712 aa11.82□□□□□ -0.52
KLHL3-204ENST00000504208 EXOC5O00471 708 aa11.81□□□□□ -0.52
KLHL3-204ENST00000504208 RAB11FIP3O75154 756 aa11.81□□□□□ -0.52
KLHL3-204ENST00000504208 CDC45O75419 566 aa11.81□□□□□ -0.52
KLHL3-204ENST00000504208 DDX58O95786 925 aaKnown RBP11.81□□□□□ -0.52
KLHL3-204ENST00000504208 UBTFL1P0CB47 393 aaPredicted RBP11.81□□□□□ -0.52
KLHL3-204ENST00000504208 TTC22Q5TAA0 569 aa11.81□□□□□ -0.52
KLHL3-204ENST00000504208 ZNF790Q6PG37 636 aa11.81□□□□□ -0.52
KLHL3-204ENST00000504208 DDX21Q9NR30 783 aaKnown RBP eCLIP11.81□□□□□ -0.52
KLHL3-204ENST00000504208 N4BP2Q86UW6 1770 aaPredicted RBP11.81□□□□□ -0.52
KLHL3-204ENST00000504208 EIF2S2P20042 333 aaKnown RBP11.8□□□□□ -0.52
KLHL3-204ENST00000504208 BEND3Q5T5X7 828 aa11.8□□□□□ -0.52
KLHL3-204ENST00000504208 KSR2Q6VAB6 950 aa11.8□□□□□ -0.52
KLHL3-204ENST00000504208 SSH3Q8TE77 659 aa11.8□□□□□ -0.52
KLHL3-204ENST00000504208 CHPF2Q9P2E5 772 aa11.8□□□□□ -0.52
KLHL3-204ENST00000504208 KCNQ3O43525 872 aa11.79□□□□□ -0.52
KLHL3-204ENST00000504208 RBM6P78332 1123 aaKnown RBP11.79□□□□□ -0.52
KLHL3-204ENST00000504208 HSP90AB4PQ58FF6 505 aa11.79□□□□□ -0.52
KLHL3-204ENST00000504208 PHAXQ9H814 394 aaKnown RBP11.79□□□□□ -0.52
KLHL3-204ENST00000504208 TNS1Q9HBL0 1735 aaKnown RBP11.79□□□□□ -0.52
KLHL3-204ENST00000504208 MTX1Q13505 466 aa11.79□□□□□ -0.52
KLHL3-204ENST00000504208 POLA2Q14181 598 aa11.79□□□□□ -0.52
KLHL3-204ENST00000504208 NKX1-1Q15270 411 aaPredicted RBP11.79□□□□□ -0.52
KLHL3-204ENST00000504208 CASC1Q6TDU7 716 aa11.79□□□□□ -0.52
KLHL3-204ENST00000504208 SEPT12Q8IYM1 358 aa11.79□□□□□ -0.52
KLHL3-204ENST00000504208 IL27Q8NEV9 243 aa11.79□□□□□ -0.52
KLHL3-204ENST00000504208 LRRCC1Q9C099 1032 aa11.79□□□□□ -0.52
KLHL3-204ENST00000504208 AOX1Q06278 1338 aa11.79□□□□□ -0.52
KLHL3-204ENST00000504208 PI4KAP2A4QPH2 592 aa11.78□□□□□ -0.52
KLHL3-204ENST00000504208 ONECUT3O60422 494 aaPredicted RBP11.78□□□□□ -0.52
KLHL3-204ENST00000504208 MFAP1P55081 439 aaKnown RBP11.78□□□□□ -0.52
KLHL3-204ENST00000504208 PI4KAP1Q8N8J0 262 aa11.78□□□□□ -0.52
KLHL3-204ENST00000504208 MARCH10Q8NA82 808 aaPredicted RBP11.78□□□□□ -0.52
KLHL3-204ENST00000504208 NECTIN2Q92692 538 aa11.78□□□□□ -0.52
KLHL3-204ENST00000504208 SNX21Q969T3 373 aa11.78□□□□□ -0.52
KLHL3-204ENST00000504208 ERBB4Q15303 1308 aa11.78□□□□□ -0.52
KLHL3-204ENST00000504208 CICQ96RK0 1608 aaPredicted RBP11.78□□□□□ -0.52
KLHL3-204ENST00000504208 LY75O60449 1722 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms