RNA–Protein interactions for RNA: ENST00000504168.5

TSPAN17-205, Transcript of tetraspanin 17, humanhuman

TSL 5

Gene TSPAN17, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-205ENST00000504168 COL15A1P39059 1388 aa31.71■■■□□ 2.67
TSPAN17-205ENST00000504168 NEFMP07197 916 aa31.71■■■□□ 2.67
TSPAN17-205ENST00000504168 YBX3P16989 372 aaKnown RBP eCLIP31.71■■■□□ 2.671e-6■■□□□ 11.7
TSPAN17-205ENST00000504168 FMNL2Q96PY5 1086 aa31.71■■■□□ 2.67
TSPAN17-205ENST00000504168 C10orf71Q711Q0 1435 aa31.69■■■□□ 2.66
TSPAN17-205ENST00000504168 STARD3NLO95772 234 aa31.69■■■□□ 2.66
TSPAN17-205ENST00000504168 FKBP8Q14318 412 aa31.69■■■□□ 2.66
TSPAN17-205ENST00000504168 N4BP2Q86UW6 1770 aaPredicted RBP31.68■■■□□ 2.66
TSPAN17-205ENST00000504168 KDM3BQ7LBC6 1761 aa31.67■■■□□ 2.66
TSPAN17-205ENST00000504168 NFE2L2Q16236 605 aa31.67■■■□□ 2.66
TSPAN17-205ENST00000504168 TEX13AQ9BXU3 409 aaPredicted RBP31.67■■■□□ 2.66
TSPAN17-205ENST00000504168 PNNQ9H307 717 aaKnown RBP31.67■■■□□ 2.66
TSPAN17-205ENST00000504168 CANXP27824 592 aaKnown RBP31.66■■■□□ 2.66
TSPAN17-205ENST00000504168 ZPR1O75312 459 aa31.65■■■□□ 2.66
TSPAN17-205ENST00000504168 USPL1Q5W0Q7 1092 aa31.65■■■□□ 2.66
TSPAN17-205ENST00000504168 NARFQ9UHQ1 456 aa31.65■■■□□ 2.66
TSPAN17-205ENST00000504168 PARP3Q9Y6F1 533 aa31.65■■■□□ 2.66
TSPAN17-205ENST00000504168 MAPK8IP3Q9UPT6 1336 aa31.65■■■□□ 2.66
TSPAN17-205ENST00000504168 PXDNLA1KZ92 1463 aa31.65■■■□□ 2.66
TSPAN17-205ENST00000504168 DDR1Q08345 913 aa31.64■■■□□ 2.66
TSPAN17-205ENST00000504168 AFDNP55196 1824 aaKnown RBP31.63■■■□□ 2.65
TSPAN17-205ENST00000504168 EIF5P55010 431 aaKnown RBP31.63■■■□□ 2.65
TSPAN17-205ENST00000504168 SCN7AQ01118 1682 aa31.63■■■□□ 2.65
TSPAN17-205ENST00000504168 BRCA1P38398 1863 aaKnown RBP31.62■■■□□ 2.65
TSPAN17-205ENST00000504168 TAF7Q15545 349 aaPredicted RBP31.62■■■□□ 2.65
TSPAN17-205ENST00000504168 PRKRIP1Q9H875 184 aaPredicted RBP31.62■■■□□ 2.65
TSPAN17-205ENST00000504168 GRIN3BO60391 1043 aa31.61■■■□□ 2.65
TSPAN17-205ENST00000504168 TM4SF1P30408 202 aa31.6■■■□□ 2.65
TSPAN17-205ENST00000504168 BCL2L12Q9HB09 334 aa31.6■■■□□ 2.65
TSPAN17-205ENST00000504168 LAMB4A4D0S4 1761 aa31.6■■■□□ 2.65
TSPAN17-205ENST00000504168 NRXN2Q9P2S2 1712 aa31.59■■■□□ 2.65
TSPAN17-205ENST00000504168 PRAMEF22A3QJZ6 481 aa31.59■■■□□ 2.65
TSPAN17-205ENST00000504168 WWC3Q9ULE0 1092 aa31.59■■■□□ 2.65
TSPAN17-205ENST00000504168 POLRMTO00411 1230 aaKnown RBP31.58■■■□□ 2.65
TSPAN17-205ENST00000504168 A1BGP04217 495 aa31.58■■■□□ 2.65
TSPAN17-205ENST00000504168 THUMPD2Q9BTF0 503 aaKnown RBP31.58■■■□□ 2.65
TSPAN17-205ENST00000504168 USP16Q9Y5T5 823 aa31.58■■■□□ 2.65
TSPAN17-205ENST00000504168 IL6STP40189 918 aaPredicted RBP31.57■■■□□ 2.64
TSPAN17-205ENST00000504168 TGFB2P61812 414 aa31.57■■■□□ 2.64
TSPAN17-205ENST00000504168 MIS18AQ9NYP9 233 aa31.57■■■□□ 2.64
TSPAN17-205ENST00000504168 BCORQ6W2J9 1755 aa31.57■■■□□ 2.64
TSPAN17-205ENST00000504168 A0A087WZG4 1122 aa31.56■■■□□ 2.64
TSPAN17-205ENST00000504168 SNRPA1P09661 255 aaKnown RBP31.56■■■□□ 2.64
TSPAN17-205ENST00000504168 NFIXQ14938 502 aa31.55■■■□□ 2.64
TSPAN17-205ENST00000504168 ZNF330Q9Y3S2 320 aaPredicted RBP31.54■■■□□ 2.64
TSPAN17-205ENST00000504168 A0A0G2JLW4 131 aa31.53■■■□□ 2.64
TSPAN17-205ENST00000504168 PNISRQ8TF01 805 aaKnown RBP31.53■■■□□ 2.64
TSPAN17-205ENST00000504168 DPEP1P16444 411 aa31.51■■■□□ 2.63
TSPAN17-205ENST00000504168 RIPK4P57078 832 aa31.51■■■□□ 2.63
TSPAN17-205ENST00000504168 WDR43Q15061 677 aaKnown RBP eCLIP31.51■■■□□ 2.63
TSPAN17-205ENST00000504168 ZNF784Q8NCA9 323 aaPredicted RBP31.51■■■□□ 2.63
TSPAN17-205ENST00000504168 TMPOP42166 694 aaKnown RBP31.5■■■□□ 2.63
TSPAN17-205ENST00000504168 PIP4K2AP48426 406 aaPredicted RBP31.5■■■□□ 2.63
TSPAN17-205ENST00000504168 CCDC146Q8IYE0 955 aa31.5■■■□□ 2.63
TSPAN17-205ENST00000504168 TBC1D2BQ9UPU7 963 aa31.5■■■□□ 2.63
TSPAN17-205ENST00000504168 ARFGEF1Q9Y6D6 1849 aa31.49■■■□□ 2.63
TSPAN17-205ENST00000504168 ADAMTS8Q9UP79 889 aa31.47■■■□□ 2.63
TSPAN17-205ENST00000504168 CAMTA2O94983 1202 aa31.46■■■□□ 2.63
TSPAN17-205ENST00000504168 KCNA3P22001 575 aa31.46■■■□□ 2.63
TSPAN17-205ENST00000504168 EIF4A1P60842 406 aaKnown RBP31.46■■■□□ 2.63
TSPAN17-205ENST00000504168 NBPF26B4DH59 902 aa31.45■■■□□ 2.63
TSPAN17-205ENST00000504168 SERPINB2P05120 415 aa31.45■■■□□ 2.63
TSPAN17-205ENST00000504168 TBC1D9BQ66K14 1250 aa31.45■■■□□ 2.63
TSPAN17-205ENST00000504168 NBPF10Q6P3W6 841 aaKnown RBP31.45■■■□□ 2.63
TSPAN17-205ENST00000504168 NPM2Q86SE8 214 aaKnown RBP31.45■■■□□ 2.63
TSPAN17-205ENST00000504168 NBPF15Q8N660 670 aa31.45■■■□□ 2.63
TSPAN17-205ENST00000504168 RUNDC1Q96C34 613 aa31.45■■■□□ 2.63
TSPAN17-205ENST00000504168 RRP7AQ9Y3A4 280 aaKnown RBP31.45■■■□□ 2.63
TSPAN17-205ENST00000504168 DLEC1Q9Y238 1755 aa31.45■■■□□ 2.62
TSPAN17-205ENST00000504168 LMOD3Q0VAK6 560 aa31.44■■■□□ 2.62
TSPAN17-205ENST00000504168 BICDL1Q6ZP65 573 aa31.44■■■□□ 2.62
TSPAN17-205ENST00000504168 DZIP3Q86Y13 1208 aaKnown RBP31.44■■■□□ 2.62
TSPAN17-205ENST00000504168 ANKRD31Q8N7Z5 1873 aa31.44■■■□□ 2.62
TSPAN17-205ENST00000504168 GIGYF1O75420 1035 aaPredicted RBP31.43■■■□□ 2.62
TSPAN17-205ENST00000504168 BCS1LQ9Y276 419 aa31.43■■■□□ 2.62
TSPAN17-205ENST00000504168 ZNF316A6NFI3 1004 aaPredicted RBP31.42■■■□□ 2.62
TSPAN17-205ENST00000504168 CARMIL3Q8ND23 1372 aa31.41■■■□□ 2.62
TSPAN17-205ENST00000504168 CHRNA5P30532 468 aa31.4■■■□□ 2.62
TSPAN17-205ENST00000504168 NEUROD2Q15784 382 aa31.4■■■□□ 2.62
TSPAN17-205ENST00000504168 TSPYL4Q9UJ04 414 aa31.39■■■□□ 2.62
TSPAN17-205ENST00000504168 PIM2Q9P1W9 311 aa31.38■■■□□ 2.61
TSPAN17-205ENST00000504168 TRIM35Q9UPQ4 493 aa31.38■■■□□ 2.61
TSPAN17-205ENST00000504168 ADCY9O60503 1353 aa31.36■■■□□ 2.61
TSPAN17-205ENST00000504168 BABAM1Q9NWV8 329 aa31.36■■■□□ 2.61
TSPAN17-205ENST00000504168 NUP98P52948 1817 aa31.34■■■□□ 2.61
TSPAN17-205ENST00000504168 COL11A2P13942 1736 aaPredicted RBP31.34■■■□□ 2.61
TSPAN17-205ENST00000504168 DALRD3Q5D0E6 543 aaKnown RBP31.33■■■□□ 2.61
TSPAN17-205ENST00000504168 PRR5LQ6MZQ0 368 aa31.33■■■□□ 2.61
TSPAN17-205ENST00000504168 CLEC4GQ6UXB4 293 aa31.33■■■□□ 2.61
TSPAN17-205ENST00000504168 SETDB2Q96T68 719 aa31.33■■■□□ 2.61
TSPAN17-205ENST00000504168 ATP10DQ9P241 1426 aa31.32■■■□□ 2.61
TSPAN17-205ENST00000504168 CCDC184Q52MB2 194 aa31.31■■■□□ 2.6
TSPAN17-205ENST00000504168 ZNF652Q9Y2D9 606 aa31.31■■■□□ 2.6
TSPAN17-205ENST00000504168 RGL2O15211 777 aa31.3■■■□□ 2.6
TSPAN17-205ENST00000504168 ARHGAP27Q6ZUM4 889 aa31.29■■■□□ 2.6
TSPAN17-205ENST00000504168 CCDC24Q8N4L8 307 aa31.29■■■□□ 2.6
TSPAN17-205ENST00000504168 CHL1O00533 1208 aa31.28■■■□□ 2.6
TSPAN17-205ENST00000504168 C2CD5Q86YS7 1000 aa31.28■■■□□ 2.6
TSPAN17-205ENST00000504168 ERBB4Q15303 1308 aa31.27■■■□□ 2.6
TSPAN17-205ENST00000504168 HLFQ16534 295 aa31.27■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms