RNA–Protein interactions for RNA: ENST00000504095.1

KDM3B-202, Transcript of lysine demethylase 3B, humanhuman

TSL 3

Gene KDM3B, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-202ENST00000504095 STRN4Q9NRL3 753 aa11.49□□□□□ -0.57
KDM3B-202ENST00000504095 HPS5Q9UPZ3 1129 aa11.49□□□□□ -0.57
KDM3B-202ENST00000504095 DDX10Q13206 875 aaKnown RBP11.48□□□□□ -0.57
KDM3B-202ENST00000504095 VPS72Q15906 364 aa11.48□□□□□ -0.57
KDM3B-202ENST00000504095 CC2D1BQ5T0F9 858 aaKnown RBP11.48□□□□□ -0.57
KDM3B-202ENST00000504095 NPC1L1Q9UHC9 1359 aa11.48□□□□□ -0.57
KDM3B-202ENST00000504095 TNNT2P45379 298 aaPredicted RBP11.47□□□□□ -0.57
KDM3B-202ENST00000504095 PRSS12P56730 875 aa11.47□□□□□ -0.57
KDM3B-202ENST00000504095 MORC1Q86VD1 984 aa11.47□□□□□ -0.57
KDM3B-202ENST00000504095 IP6K1Q92551 441 aa11.47□□□□□ -0.57
KDM3B-202ENST00000504095 GJD4Q96KN9 370 aaPredicted RBP11.47□□□□□ -0.57
KDM3B-202ENST00000504095 TSHZ2Q9NRE2 1034 aa11.47□□□□□ -0.57
KDM3B-202ENST00000504095 FAM198AQ9UFP1 575 aa11.47□□□□□ -0.57
KDM3B-202ENST00000504095 WNK3Q9BYP7 1800 aa11.46□□□□□ -0.57
KDM3B-202ENST00000504095 FAM208AQ9UK61 1670 aaKnown RBP11.46□□□□□ -0.57
KDM3B-202ENST00000504095 BLMP54132 1417 aaPredicted RBP11.46□□□□□ -0.57
KDM3B-202ENST00000504095 RTL1A6NKG5 1358 aa11.46□□□□□ -0.57
KDM3B-202ENST00000504095 SPATA31A5Q5VU36 1347 aa11.46□□□□□ -0.57
KDM3B-202ENST00000504095 SPATA31A7Q8IWB4 1347 aa11.46□□□□□ -0.57
KDM3B-202ENST00000504095 OSBPP22059 807 aa11.46□□□□□ -0.57
KDM3B-202ENST00000504095 RXRBP28702 533 aa11.46□□□□□ -0.57
KDM3B-202ENST00000504095 HOXC9P31274 260 aa11.46□□□□□ -0.57
KDM3B-202ENST00000504095 AMPHP49418 695 aa11.46□□□□□ -0.57
KDM3B-202ENST00000504095 EVA1CP58658 441 aa11.46□□□□□ -0.57
KDM3B-202ENST00000504095 RBM6P78332 1123 aaKnown RBP11.46□□□□□ -0.57
KDM3B-202ENST00000504095 CNGB1Q14028 1251 aaPredicted RBP11.46□□□□□ -0.57
KDM3B-202ENST00000504095 LARP1Q6PKG0 1096 aaKnown RBP11.46□□□□□ -0.57
KDM3B-202ENST00000504095 ILDR2Q71H61 639 aa11.46□□□□□ -0.57
KDM3B-202ENST00000504095 EMILIN1Q9Y6C2 1016 aa11.46□□□□□ -0.57
KDM3B-202ENST00000504095 BRWD3Q6RI45 1802 aa11.46□□□□□ -0.58
KDM3B-202ENST00000504095 SPATA31A1Q5TZJ5 1347 aa11.45□□□□□ -0.58
KDM3B-202ENST00000504095 POLKQ9UBT6 870 aa11.45□□□□□ -0.58
KDM3B-202ENST00000504095 TSR3Q9UJK0 312 aaKnown RBP11.45□□□□□ -0.58
KDM3B-202ENST00000504095 CCDC9Q9Y3X0 531 aaKnown RBP11.45□□□□□ -0.58
KDM3B-202ENST00000504095 CRB1P82279 1406 aa11.44□□□□□ -0.58
KDM3B-202ENST00000504095 SMG6Q86US8 1419 aaKnown RBP11.44□□□□□ -0.58
KDM3B-202ENST00000504095 FLT4P35916 1363 aa11.44□□□□□ -0.58
KDM3B-202ENST00000504095 KIF24Q5T7B8 1368 aa11.44□□□□□ -0.58
KDM3B-202ENST00000504095 WDR17Q8IZU2 1322 aa11.44□□□□□ -0.58
KDM3B-202ENST00000504095 C3orf80F5H4A9 247 aa11.44□□□□□ -0.58
KDM3B-202ENST00000504095 NYAP1Q6ZVC0 841 aa11.44□□□□□ -0.58
KDM3B-202ENST00000504095 ANKRD24Q8TF21 1146 aa11.44□□□□□ -0.58
KDM3B-202ENST00000504095 PNMA3Q9UL41 463 aa11.44□□□□□ -0.58
KDM3B-202ENST00000504095 CDK12Q9NYV4 1490 aaPredicted RBP11.44□□□□□ -0.58
KDM3B-202ENST00000504095 RGS12O14924 1447 aa11.43□□□□□ -0.58
KDM3B-202ENST00000504095 THSD7AQ9UPZ6 1657 aa11.43□□□□□ -0.58
KDM3B-202ENST00000504095 PPM1GO15355 546 aaPredicted RBP11.43□□□□□ -0.58
KDM3B-202ENST00000504095 ITGBL1O95965 494 aaPredicted RBP11.43□□□□□ -0.58
KDM3B-202ENST00000504095 CSB-PGBD3P0DP91 1061 aa11.43□□□□□ -0.58
KDM3B-202ENST00000504095 HSP90AB2PQ58FF8 381 aa11.43□□□□□ -0.58
KDM3B-202ENST00000504095 LTV1Q96GA3 475 aaPredicted RBP11.43□□□□□ -0.58
KDM3B-202ENST00000504095 INSRP06213 1382 aa11.42□□□□□ -0.58
KDM3B-202ENST00000504095 NBPF26B4DH59 902 aa11.42□□□□□ -0.58
KDM3B-202ENST00000504095 TOM1L2Q6ZVM7 507 aa11.42□□□□□ -0.58
KDM3B-202ENST00000504095 SAMD7Q7Z3H4 446 aa11.42□□□□□ -0.58
KDM3B-202ENST00000504095 USP35Q9P2H5 1018 aa11.42□□□□□ -0.58
KDM3B-202ENST00000504095 PARP4Q9UKK3 1724 aaKnown RBP11.41□□□□□ -0.58
KDM3B-202ENST00000504095 TCP11L2Q8N4U5 519 aa11.41□□□□□ -0.58
KDM3B-202ENST00000504095 TATDN2Q93075 761 aa11.41□□□□□ -0.58
KDM3B-202ENST00000504095 PPP4CP60510 307 aa11.4□□□□□ -0.58
KDM3B-202ENST00000504095 BARGINQ6ZT62 677 aa11.4□□□□□ -0.58
KDM3B-202ENST00000504095 CARD10Q9BWT7 1032 aa11.4□□□□□ -0.58
KDM3B-202ENST00000504095 NLRP2Q9NX02 1062 aa11.4□□□□□ -0.58
KDM3B-202ENST00000504095 PARD3Q8TEW0 1356 aa11.4□□□□□ -0.59
KDM3B-202ENST00000504095 EP400Q96L91 3159 aa11.39□□□□□ -0.59
KDM3B-202ENST00000504095 LRRC37A3O60309 1634 aa11.39□□□□□ -0.59
KDM3B-202ENST00000504095 RNF40O75150 1001 aa11.39□□□□□ -0.59
KDM3B-202ENST00000504095 MTHFSP49914 203 aa11.39□□□□□ -0.59
KDM3B-202ENST00000504095 KCNC4Q03721 635 aa11.39□□□□□ -0.59
KDM3B-202ENST00000504095 SEPT12Q8IYM1 358 aa11.39□□□□□ -0.59
KDM3B-202ENST00000504095 THRAP3Q9Y2W1 955 aaKnown RBP11.39□□□□□ -0.59
KDM3B-202ENST00000504095 DISP2A7MBM2 1401 aa11.38□□□□□ -0.59
KDM3B-202ENST00000504095 EIF4A2Q14240 407 aaKnown RBP11.38□□□□□ -0.59
KDM3B-202ENST00000504095 NBPF6Q5VWK0 638 aa11.38□□□□□ -0.59
KDM3B-202ENST00000504095 NUDT18Q6ZVK8 323 aa11.38□□□□□ -0.59
KDM3B-202ENST00000504095 NBPF4Q96M43 638 aa11.38□□□□□ -0.59
KDM3B-202ENST00000504095 RGPD1P0DJD0 1748 aa11.38□□□□□ -0.59
KDM3B-202ENST00000504095 RGS20O76081 388 aa11.37□□□□□ -0.59
KDM3B-202ENST00000504095 PPP2R1AP30153 589 aa11.37□□□□□ -0.59
KDM3B-202ENST00000504095 MYT1Q01538 1121 aa11.37□□□□□ -0.59
KDM3B-202ENST00000504095 KCNV2Q8TDN2 545 aa11.37□□□□□ -0.59
KDM3B-202ENST00000504095 COL3A1P02461 1466 aaPredicted RBP11.37□□□□□ -0.59
KDM3B-202ENST00000504095 NCAPD2Q15021 1401 aa11.36□□□□□ -0.59
KDM3B-202ENST00000504095 SHANK3Q9BYB0 1731 aa11.36□□□□□ -0.59
KDM3B-202ENST00000504095 MLLT3P42568 568 aaPredicted RBP11.36□□□□□ -0.59
KDM3B-202ENST00000504095 PADI6Q6TGC4 694 aa11.36□□□□□ -0.59
KDM3B-202ENST00000504095 USHBP1Q8N6Y0 703 aa11.36□□□□□ -0.59
KDM3B-202ENST00000504095 EYA1Q99502 592 aa11.35□□□□□ -0.59
KDM3B-202ENST00000504095 KAT6BQ8WYB5 2073 aa11.35□□□□□ -0.59
KDM3B-202ENST00000504095 MEGF6O75095 1541 aa11.35□□□□□ -0.59
KDM3B-202ENST00000504095 IL2RBP14784 551 aa11.34□□□□□ -0.59
KDM3B-202ENST00000504095 IL13P35225 146 aa11.34□□□□□ -0.59
KDM3B-202ENST00000504095 RALBP1Q15311 655 aa11.34□□□□□ -0.59
KDM3B-202ENST00000504095 IGSF1Q8N6C5 1336 aa11.34□□□□□ -0.59
KDM3B-202ENST00000504095 PKD1L3Q7Z443 1732 aa11.33□□□□□ -0.6
KDM3B-202ENST00000504095 KRT27Q7Z3Y8 459 aa11.33□□□□□ -0.6
KDM3B-202ENST00000504095 ARHGEF1Q92888 912 aaKnown RBP11.33□□□□□ -0.6
KDM3B-202ENST00000504095 CDCA7Q9BWT1 371 aaPredicted RBP11.33□□□□□ -0.6
KDM3B-202ENST00000504095 IRX2Q9BZI1 471 aaPredicted RBP11.33□□□□□ -0.6
KDM3B-202ENST00000504095 NPDC1Q9NQX5 325 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms