RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 PANK1Q8TE04 598 aa11.51□□□□□ -0.57
NR1I3-216ENST00000502848 TEX13AQ9BXU3 409 aaPredicted RBP11.51□□□□□ -0.57
NR1I3-216ENST00000502848 HYPKQ9NX55 129 aa11.51□□□□□ -0.57
NR1I3-216ENST00000502848 TMOD3Q9NYL9 352 aa11.51□□□□□ -0.57
NR1I3-216ENST00000502848 USP35Q9P2H5 1018 aa11.51□□□□□ -0.57
NR1I3-216ENST00000502848 ONECUT3O60422 494 aaPredicted RBP11.5□□□□□ -0.57
NR1I3-216ENST00000502848 ATXN8OSP0DMR3 200 aa11.5□□□□□ -0.57
NR1I3-216ENST00000502848 FLIIQ13045 1269 aa11.5□□□□□ -0.57
NR1I3-216ENST00000502848 DDX21Q9NR30 783 aaKnown RBP eCLIP11.5□□□□□ -0.57
NR1I3-216ENST00000502848 TRPC5Q9UL62 973 aaPredicted RBP11.5□□□□□ -0.57
NR1I3-216ENST00000502848 COG6Q9Y2V7 657 aa11.5□□□□□ -0.57
NR1I3-216ENST00000502848 ITPRIPQ8IWB1 547 aa11.49□□□□□ -0.57
NR1I3-216ENST00000502848 ZNF496Q96IT1 587 aaPredicted RBP11.49□□□□□ -0.57
NR1I3-216ENST00000502848 ZBTB40Q9NUA8 1239 aa11.49□□□□□ -0.57
NR1I3-216ENST00000502848 ATP10DQ9P241 1426 aa11.49□□□□□ -0.57
NR1I3-216ENST00000502848 ZNF831Q5JPB2 1677 aa11.49□□□□□ -0.57
NR1I3-216ENST00000502848 KCNQ3O43525 872 aa11.48□□□□□ -0.57
NR1I3-216ENST00000502848 TMEM57Q8N5G2 664 aa11.48□□□□□ -0.57
NR1I3-216ENST00000502848 CCDC9Q9Y3X0 531 aaKnown RBP11.48□□□□□ -0.57
NR1I3-216ENST00000502848 AFF2P51816 1311 aa11.48□□□□□ -0.57
NR1I3-216ENST00000502848 KDM2BQ8NHM5 1336 aa11.48□□□□□ -0.57
NR1I3-216ENST00000502848 DOT1LQ8TEK3 1739 aa11.47□□□□□ -0.57
NR1I3-216ENST00000502848 C5P01031 1676 aa11.47□□□□□ -0.57
NR1I3-216ENST00000502848 DDX58O95786 925 aaKnown RBP11.47□□□□□ -0.57
NR1I3-216ENST00000502848 HDAC1Q13547 482 aaPredicted RBP11.47□□□□□ -0.57
NR1I3-216ENST00000502848 GJD4Q96KN9 370 aaPredicted RBP11.47□□□□□ -0.57
NR1I3-216ENST00000502848 ZBTB7BO15156 539 aaPredicted RBP11.46□□□□□ -0.57
NR1I3-216ENST00000502848 SLC39A6Q13433 755 aa11.46□□□□□ -0.57
NR1I3-216ENST00000502848 FKBP5Q13451 457 aaPredicted RBP11.46□□□□□ -0.57
NR1I3-216ENST00000502848 B4GALNT3Q6L9W6 998 aa11.46□□□□□ -0.57
NR1I3-216ENST00000502848 PIGBQ92521 554 aa11.46□□□□□ -0.57
NR1I3-216ENST00000502848 CHPF2Q9P2E5 772 aa11.46□□□□□ -0.57
NR1I3-216ENST00000502848 HDAC5Q9UQL6 1122 aa11.46□□□□□ -0.57
NR1I3-216ENST00000502848 ITGB4P16144 1822 aa11.46□□□□□ -0.58
NR1I3-216ENST00000502848 PDIA6Q15084 440 aa11.45□□□□□ -0.58
NR1I3-216ENST00000502848 MARCH10Q8NA82 808 aaPredicted RBP11.45□□□□□ -0.58
NR1I3-216ENST00000502848 SMARCC1Q92922 1105 aaPredicted RBP11.45□□□□□ -0.58
NR1I3-216ENST00000502848 RWDD1Q9H446 243 aaPredicted RBP11.45□□□□□ -0.58
NR1I3-216ENST00000502848 TNNQ9UQP3 1299 aa11.45□□□□□ -0.58
NR1I3-216ENST00000502848 GNAI3P08754 354 aa11.44□□□□□ -0.58
NR1I3-216ENST00000502848 EIF2S2P20042 333 aaKnown RBP11.44□□□□□ -0.58
NR1I3-216ENST00000502848 FAM98CQ17RN3 349 aaKnown RBP11.44□□□□□ -0.58
NR1I3-216ENST00000502848 ZNF772Q68DY9 489 aaPredicted RBP11.44□□□□□ -0.58
NR1I3-216ENST00000502848 ZNF219Q9P2Y4 722 aaPredicted RBP11.44□□□□□ -0.58
NR1I3-216ENST00000502848 NHSQ6T4R5 1651 aa11.43□□□□□ -0.58
NR1I3-216ENST00000502848 TCERG1O14776 1098 aaKnown RBP11.43□□□□□ -0.58
NR1I3-216ENST00000502848 ALDH1L1O75891 902 aa11.43□□□□□ -0.58
NR1I3-216ENST00000502848 STARD3NLO95772 234 aa11.43□□□□□ -0.58
NR1I3-216ENST00000502848 HMGB2P26583 209 aaKnown RBP11.43□□□□□ -0.58
NR1I3-216ENST00000502848 KSR2Q6VAB6 950 aa11.43□□□□□ -0.58
NR1I3-216ENST00000502848 G2E3Q7L622 706 aa11.43□□□□□ -0.58
NR1I3-216ENST00000502848 LRP10Q7Z4F1 713 aa11.43□□□□□ -0.58
NR1I3-216ENST00000502848 FBXO41Q8TF61 875 aa11.43□□□□□ -0.58
NR1I3-216ENST00000502848 DNAAF4Q8WXU2 420 aa11.43□□□□□ -0.58
NR1I3-216ENST00000502848 ATG3Q9NT62 314 aa11.43□□□□□ -0.58
NR1I3-216ENST00000502848 ADCY9O60503 1353 aa11.42□□□□□ -0.58
NR1I3-216ENST00000502848 RPAP2Q8IXW5 612 aaPredicted RBP11.42□□□□□ -0.58
NR1I3-216ENST00000502848 SRCIN1Q9C0H9 1055 aa11.42□□□□□ -0.58
NR1I3-216ENST00000502848 ATF5Q9Y2D1 282 aaPredicted RBP11.42□□□□□ -0.58
NR1I3-216ENST00000502848 RREB1Q92766 1687 aa11.41□□□□□ -0.58
NR1I3-216ENST00000502848 PRIM1P49642 420 aaKnown RBP11.41□□□□□ -0.58
NR1I3-216ENST00000502848 LINS1Q8NG48 757 aa11.41□□□□□ -0.58
NR1I3-216ENST00000502848 PHAXQ9H814 394 aaKnown RBP11.41□□□□□ -0.58
NR1I3-216ENST00000502848 USP16Q9Y5T5 823 aa11.41□□□□□ -0.58
NR1I3-216ENST00000502848 COL15A1P39059 1388 aa11.41□□□□□ -0.58
NR1I3-216ENST00000502848 PI4KAP2A4QPH2 592 aa11.4□□□□□ -0.58
NR1I3-216ENST00000502848 RGL2O15211 777 aa11.4□□□□□ -0.58
NR1I3-216ENST00000502848 BEND3Q5T5X7 828 aa11.4□□□□□ -0.58
NR1I3-216ENST00000502848 PI4KAP1Q8N8J0 262 aa11.4□□□□□ -0.58
NR1I3-216ENST00000502848 QTRT2Q9H974 415 aaKnown RBP11.4□□□□□ -0.58
NR1I3-216ENST00000502848 ASAP1Q9ULH1 1129 aa11.4□□□□□ -0.58
NR1I3-216ENST00000502848 PCDHB15Q9Y5E8 787 aa11.4□□□□□ -0.58
NR1I3-216ENST00000502848 TJP1Q07157 1748 aa11.4□□□□□ -0.58
NR1I3-216ENST00000502848 PRAMEF22A3QJZ6 481 aa11.39□□□□□ -0.59
NR1I3-216ENST00000502848 PTCD1O75127 700 aaKnown RBP11.39□□□□□ -0.59
NR1I3-216ENST00000502848 NEXNQ0ZGT2 675 aa11.39□□□□□ -0.59
NR1I3-216ENST00000502848 SMC5Q8IY18 1101 aa11.39□□□□□ -0.59
NR1I3-216ENST00000502848 PLBD2Q8NHP8 589 aa11.39□□□□□ -0.59
NR1I3-216ENST00000502848 NECTIN2Q92692 538 aa11.39□□□□□ -0.59
NR1I3-216ENST00000502848 GCC1Q96CN9 775 aa11.39□□□□□ -0.59
NR1I3-216ENST00000502848 PALLDQ8WX93 1383 aa11.39□□□□□ -0.59
NR1I3-216ENST00000502848 UTYO14607 1347 aa11.38□□□□□ -0.59
NR1I3-216ENST00000502848 F6X3S4 739 aa11.38□□□□□ -0.59
NR1I3-216ENST00000502848 HMMRO75330 724 aa11.38□□□□□ -0.59
NR1I3-216ENST00000502848 GNAI2P04899 355 aa11.38□□□□□ -0.59
NR1I3-216ENST00000502848 RBM6P78332 1123 aaKnown RBP11.38□□□□□ -0.59
NR1I3-216ENST00000502848 PROSER3Q2NL68 480 aa11.38□□□□□ -0.59
NR1I3-216ENST00000502848 SLC4A10Q6U841 1118 aa11.38□□□□□ -0.59
NR1I3-216ENST00000502848 ANKRD44Q8N8A2 993 aa11.38□□□□□ -0.59
NR1I3-216ENST00000502848 METTL22Q9BUU2 404 aaPredicted RBP11.38□□□□□ -0.59
NR1I3-216ENST00000502848 UBTFL1P0CB47 393 aaPredicted RBP11.37□□□□□ -0.59
NR1I3-216ENST00000502848 CYP19A1P11511 503 aaPredicted RBP11.37□□□□□ -0.59
NR1I3-216ENST00000502848 IL6STP40189 918 aaPredicted RBP11.37□□□□□ -0.59
NR1I3-216ENST00000502848 ANKRD13DQ6ZTN6 518 aa11.37□□□□□ -0.59
NR1I3-216ENST00000502848 SEPT12Q8IYM1 358 aa11.37□□□□□ -0.59
NR1I3-216ENST00000502848 XAGE3Q8WTP9 111 aa11.37□□□□□ -0.59
NR1I3-216ENST00000502848 MAP3K2Q9Y2U5 619 aa11.37□□□□□ -0.59
NR1I3-216ENST00000502848 LOC102724428A0A0B4J2F2 783 aa11.36□□□□□ -0.59
NR1I3-216ENST00000502848 A0A0G2JS52 829 aa11.36□□□□□ -0.59
NR1I3-216ENST00000502848 NBPF26B4DH59 902 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms