RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 RNF135Q8IUD6 432 aa4.77□□□□□ -1.65
SUB1-202ENST00000502453 ZNF654Q8IZM8 581 aa4.77□□□□□ -1.65
SUB1-202ENST00000502453 PGBD3Q8N328 593 aa4.77□□□□□ -1.65
SUB1-202ENST00000502453 CCDC85AQ96PX6 553 aaPredicted RBP4.77□□□□□ -1.65
SUB1-202ENST00000502453 ZHX3Q9H4I2 956 aa4.77□□□□□ -1.65
SUB1-202ENST00000502453 PPCSQ9HAB8 311 aa4.77□□□□□ -1.65
SUB1-202ENST00000502453 DNAAF2Q9NVR5 837 aaKnown RBP4.77□□□□□ -1.65
SUB1-202ENST00000502453 INTUQ9ULD6 942 aa4.77□□□□□ -1.65
SUB1-202ENST00000502453 GNALP38405 381 aa4.77□□□□□ -1.65
SUB1-202ENST00000502453 SDR16C5Q8N3Y7 309 aa4.77□□□□□ -1.65
SUB1-202ENST00000502453 SLAIN1Q8ND83 568 aa4.77□□□□□ -1.65
SUB1-202ENST00000502453 C1orf216Q8TAB5 229 aa4.77□□□□□ -1.65
SUB1-202ENST00000502453 PAGR1Q9BTK6 254 aa4.77□□□□□ -1.65
SUB1-202ENST00000502453 SWAP70Q9UH65 585 aa4.77□□□□□ -1.65
SUB1-202ENST00000502453 GGT7Q9UJ14 662 aa4.77□□□□□ -1.65
SUB1-202ENST00000502453 DDX41Q9UJV9 622 aaKnown RBP4.77□□□□□ -1.65
SUB1-202ENST00000502453 KIAA1024Q9UPX6 916 aa4.77□□□□□ -1.65
SUB1-202ENST00000502453 SFI1A8K8P3 1242 aa4.76□□□□□ -1.65
SUB1-202ENST00000502453 ENPP3O14638 875 aa4.76□□□□□ -1.65
SUB1-202ENST00000502453 PLCB3Q01970 1234 aa4.76□□□□□ -1.65
SUB1-202ENST00000502453 TTC39BQ5VTQ0 682 aaPredicted RBP4.76□□□□□ -1.65
SUB1-202ENST00000502453 NFATC2IPQ8NCF5 419 aa4.76□□□□□ -1.65
SUB1-202ENST00000502453 C8orf48Q96LL4 319 aa4.76□□□□□ -1.65
SUB1-202ENST00000502453 DYTNA2CJ06 578 aa4.76□□□□□ -1.65
SUB1-202ENST00000502453 TREHO43280 583 aa4.76□□□□□ -1.65
SUB1-202ENST00000502453 DAB2P98082 770 aa4.76□□□□□ -1.65
SUB1-202ENST00000502453 EHHADHQ08426 723 aa4.76□□□□□ -1.65
SUB1-202ENST00000502453 SF3B2Q13435 895 aaKnown RBP4.76□□□□□ -1.65
SUB1-202ENST00000502453 PPP2R5AQ15172 486 aa4.76□□□□□ -1.65
SUB1-202ENST00000502453 SLC4A10Q6U841 1118 aa4.76□□□□□ -1.65
SUB1-202ENST00000502453 TPCN2Q8NHX9 752 aa4.76□□□□□ -1.65
SUB1-202ENST00000502453 FRMD6Q96NE9 622 aa4.76□□□□□ -1.65
SUB1-202ENST00000502453 TCERG1O14776 1098 aaKnown RBP4.76□□□□□ -1.65
SUB1-202ENST00000502453 LRRC41Q15345 812 aa4.76□□□□□ -1.65
SUB1-202ENST00000502453 PLPP7Q8NBV4 271 aa4.76□□□□□ -1.65
SUB1-202ENST00000502453 STAC3Q96MF2 364 aa4.76□□□□□ -1.65
SUB1-202ENST00000502453 PRKAB1Q9Y478 270 aa4.76□□□□□ -1.65
SUB1-202ENST00000502453 KDM4FA0A1W2PPD8 638 aa4.75□□□□□ -1.65
SUB1-202ENST00000502453 ZBBXA8MT70 800 aa4.75□□□□□ -1.65
SUB1-202ENST00000502453 GJA5P36382 358 aa4.75□□□□□ -1.65
SUB1-202ENST00000502453 ZRSR2Q15696 482 aaKnown RBP4.75□□□□□ -1.65
SUB1-202ENST00000502453 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.75□□□□□ -1.65
SUB1-202ENST00000502453 SH3TC2Q8TF17 1288 aa4.75□□□□□ -1.65
SUB1-202ENST00000502453 SYMPKQ92797 1274 aaKnown RBP4.75□□□□□ -1.65
SUB1-202ENST00000502453 DCBLD2Q96PD2 775 aa4.75□□□□□ -1.65
SUB1-202ENST00000502453 RBAK-RBAKDNI3L0D1 243 aa4.75□□□□□ -1.65
SUB1-202ENST00000502453 ATF4P18848 351 aaPredicted RBP4.75□□□□□ -1.65
SUB1-202ENST00000502453 HDAC1Q13547 482 aaPredicted RBP4.75□□□□□ -1.65
SUB1-202ENST00000502453 CCDC96Q2M329 555 aa4.75□□□□□ -1.65
SUB1-202ENST00000502453 KSR2Q6VAB6 950 aa4.75□□□□□ -1.65
SUB1-202ENST00000502453 KLF15Q9UIH9 416 aa4.75□□□□□ -1.65
SUB1-202ENST00000502453 L1TD1Q5T7N2 865 aaKnown RBP4.75□□□□□ -1.65
SUB1-202ENST00000502453 PTCD2Q8WV60 388 aaKnown RBP4.75□□□□□ -1.65
SUB1-202ENST00000502453 ZNF512BQ96KM6 892 aaPredicted RBP4.75□□□□□ -1.65
SUB1-202ENST00000502453 NEUROD6Q96NK8 337 aa4.75□□□□□ -1.65
SUB1-202ENST00000502453 PURBQ96QR8 312 aaKnown RBP4.75□□□□□ -1.65
SUB1-202ENST00000502453 EPAS1Q99814 870 aa4.75□□□□□ -1.65
SUB1-202ENST00000502453 CHST12Q9NRB3 414 aa4.75□□□□□ -1.65
SUB1-202ENST00000502453 NRBP1Q9UHY1 535 aa4.75□□□□□ -1.65
SUB1-202ENST00000502453 FAM221BA6H8Z2 402 aa4.75□□□□□ -1.65
SUB1-202ENST00000502453 ATF3P18847 181 aa4.75□□□□□ -1.65
SUB1-202ENST00000502453 MPSTP25325 297 aa4.75□□□□□ -1.65
SUB1-202ENST00000502453 ITGAEP38570 1179 aa4.75□□□□□ -1.65
SUB1-202ENST00000502453 PPP4CP60510 307 aa4.75□□□□□ -1.65
SUB1-202ENST00000502453 FMR1Q06787 632 aaKnown RBP eCLIP4.75□□□□□ -1.65
SUB1-202ENST00000502453 EML3Q32P44 896 aa4.75□□□□□ -1.65
SUB1-202ENST00000502453 JAMLQ86YT9 394 aa4.75□□□□□ -1.65
SUB1-202ENST00000502453 C1orf131Q8NDD1 294 aaKnown RBP4.75□□□□□ -1.65
SUB1-202ENST00000502453 ESYT3A0FGR9 886 aa4.74□□□□□ -1.65
SUB1-202ENST00000502453 HSP90AA1P07900 732 aaKnown RBP4.74□□□□□ -1.65
SUB1-202ENST00000502453 SEC13P55735 322 aa4.74□□□□□ -1.65
SUB1-202ENST00000502453 PAK2Q13177 524 aa4.74□□□□□ -1.65
SUB1-202ENST00000502453 PLEKHG4Q58EX7 1191 aa4.74□□□□□ -1.65
SUB1-202ENST00000502453 ZNF408Q9H9D4 720 aa4.74□□□□□ -1.65
SUB1-202ENST00000502453 SH3BP1Q9Y3L3 701 aa4.74□□□□□ -1.65
SUB1-202ENST00000502453 EXOC5O00471 708 aa4.74□□□□□ -1.65
SUB1-202ENST00000502453 CXorf38Q8TB03 319 aa4.74□□□□□ -1.65
SUB1-202ENST00000502453 SENP7Q9BQF6 1050 aa4.74□□□□□ -1.65
SUB1-202ENST00000502453 RBCK1Q9BYM8 510 aa4.74□□□□□ -1.65
SUB1-202ENST00000502453 SNTG2Q9NY99 539 aa4.74□□□□□ -1.65
SUB1-202ENST00000502453 G3V3G9 751 aa4.74□□□□□ -1.65
SUB1-202ENST00000502453 MZF1P28698 734 aaPredicted RBP4.74□□□□□ -1.65
SUB1-202ENST00000502453 CACTIN-AS1Q8N1I8 211 aa4.74□□□□□ -1.65
SUB1-202ENST00000502453 PRKD2Q9BZL6 878 aa4.74□□□□□ -1.65
SUB1-202ENST00000502453 CCDC87Q9NVE4 849 aa4.74□□□□□ -1.65
SUB1-202ENST00000502453 TPX2Q9ULW0 747 aaKnown RBP4.74□□□□□ -1.65
SUB1-202ENST00000502453 BPNT1O95861 308 aa4.73□□□□□ -1.65
SUB1-202ENST00000502453 FKBP5Q13451 457 aaPredicted RBP4.73□□□□□ -1.65
SUB1-202ENST00000502453 C21orf62-AS1Q17RA5 79 aa4.73□□□□□ -1.65
SUB1-202ENST00000502453 ANKS3Q6ZW76 656 aa4.73□□□□□ -1.65
SUB1-202ENST00000502453 ZNF622Q969S3 477 aaKnown RBP eCLIP4.73□□□□□ -1.65
SUB1-202ENST00000502453 DEPDC7Q96QD5 511 aa4.73□□□□□ -1.65
SUB1-202ENST00000502453 GEMIN8Q9NWZ8 242 aaKnown RBP4.73□□□□□ -1.65
SUB1-202ENST00000502453 NUDT7P0C024 238 aa4.73□□□□□ -1.65
SUB1-202ENST00000502453 OXLD1Q5BKU9 147 aa4.73□□□□□ -1.65
SUB1-202ENST00000502453 GET4Q7L5D6 327 aaPredicted RBP4.73□□□□□ -1.65
SUB1-202ENST00000502453 HS2ST1Q7LGA3 356 aa4.73□□□□□ -1.65
SUB1-202ENST00000502453 APPBP2Q92624 585 aa4.73□□□□□ -1.65
SUB1-202ENST00000502453 NOD1Q9Y239 953 aa4.73□□□□□ -1.65
SUB1-202ENST00000502453 PNMA6FA0A0J9YX94 578 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms