RNA–Protein interactions for RNA: ENST00000502187.5

LINC01550-202, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,455 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-202ENST00000502187 TTC5Q8N0Z6 440 aa11.54□□□□□ -0.56
LINC01550-202ENST00000502187 UBR2Q8IWV8 1755 aa11.54□□□□□ -0.56
LINC01550-202ENST00000502187 ZNF790Q6PG37 636 aa11.53□□□□□ -0.56
LINC01550-202ENST00000502187 ATF7IPQ6VMQ6 1270 aa11.53□□□□□ -0.56
LINC01550-202ENST00000502187 C5P01031 1676 aa11.53□□□□□ -0.56
LINC01550-202ENST00000502187 ATRNO75882 1429 aa11.53□□□□□ -0.56
LINC01550-202ENST00000502187 SLC39A6Q13433 755 aa11.53□□□□□ -0.56
LINC01550-202ENST00000502187 CCDC30Q5VVM6 783 aa11.53□□□□□ -0.56
LINC01550-202ENST00000502187 SAMD1Q6SPF0 538 aaPredicted RBP11.53□□□□□ -0.56
LINC01550-202ENST00000502187 SEPT12Q8IYM1 358 aa11.53□□□□□ -0.56
LINC01550-202ENST00000502187 STK31Q9BXU1 1019 aa11.53□□□□□ -0.56
LINC01550-202ENST00000502187 CHMP4AQ9BY43 222 aa11.53□□□□□ -0.56
LINC01550-202ENST00000502187 GLI3P10071 1580 aa11.53□□□□□ -0.56
LINC01550-202ENST00000502187 THSD7AQ9UPZ6 1657 aa11.52□□□□□ -0.56
LINC01550-202ENST00000502187 TRIM27P14373 513 aa11.52□□□□□ -0.56
LINC01550-202ENST00000502187 HDGFL1Q5TGJ6 251 aa11.52□□□□□ -0.56
LINC01550-202ENST00000502187 MARCH10Q8NA82 808 aaPredicted RBP11.52□□□□□ -0.56
LINC01550-202ENST00000502187 PANK1Q8TE04 598 aa11.52□□□□□ -0.56
LINC01550-202ENST00000502187 CLUAP1Q96AJ1 413 aa11.52□□□□□ -0.56
LINC01550-202ENST00000502187 RGS17Q9UGC6 210 aaPredicted RBP11.52□□□□□ -0.56
LINC01550-202ENST00000502187 LAMB4A4D0S4 1761 aa11.52□□□□□ -0.56
LINC01550-202ENST00000502187 RBM6P78332 1123 aaKnown RBP11.52□□□□□ -0.57
LINC01550-202ENST00000502187 FAM182BQ5T319 152 aa11.52□□□□□ -0.57
LINC01550-202ENST00000502187 DZIP1LQ8IYY4 767 aaKnown RBP11.52□□□□□ -0.57
LINC01550-202ENST00000502187 SYTL4Q96C24 671 aaPredicted RBP11.52□□□□□ -0.57
LINC01550-202ENST00000502187 TNNQ9UQP3 1299 aa11.52□□□□□ -0.57
LINC01550-202ENST00000502187 HEG1Q9ULI3 1381 aa11.52□□□□□ -0.57
LINC01550-202ENST00000502187 RXRBP28702 533 aa11.51□□□□□ -0.57
LINC01550-202ENST00000502187 ARHGAP45Q92619 1136 aa11.51□□□□□ -0.57
LINC01550-202ENST00000502187 TMOD3Q9NYL9 352 aa11.51□□□□□ -0.57
LINC01550-202ENST00000502187 ONECUT3O60422 494 aaPredicted RBP11.51□□□□□ -0.57
LINC01550-202ENST00000502187 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.51□□□□□ -0.57
LINC01550-202ENST00000502187 NECTIN2Q92692 538 aa11.51□□□□□ -0.57
LINC01550-202ENST00000502187 COG6Q9Y2V7 657 aa11.51□□□□□ -0.57
LINC01550-202ENST00000502187 GIGYF1O75420 1035 aaPredicted RBP11.5□□□□□ -0.57
LINC01550-202ENST00000502187 RLBP1P12271 317 aa11.5□□□□□ -0.57
LINC01550-202ENST00000502187 EIF2S2P20042 333 aaKnown RBP11.5□□□□□ -0.57
LINC01550-202ENST00000502187 POTEAQ6S8J7 498 aa11.5□□□□□ -0.57
LINC01550-202ENST00000502187 HS6ST3Q8IZP7 471 aa11.5□□□□□ -0.57
LINC01550-202ENST00000502187 ACSBG1Q96GR2 724 aa11.5□□□□□ -0.57
LINC01550-202ENST00000502187 FMNL2Q96PY5 1086 aa11.5□□□□□ -0.57
LINC01550-202ENST00000502187 API5Q9BZZ5 524 aaKnown RBP11.5□□□□□ -0.57
LINC01550-202ENST00000502187 PTPRCP08575 1304 aa11.5□□□□□ -0.57
LINC01550-202ENST00000502187 PRIM1P49642 420 aaKnown RBP11.49□□□□□ -0.57
LINC01550-202ENST00000502187 ZNF496Q96IT1 587 aaPredicted RBP11.49□□□□□ -0.57
LINC01550-202ENST00000502187 KCPQ6ZWJ8 1503 aa11.49□□□□□ -0.57
LINC01550-202ENST00000502187 MVPQ14764 893 aaKnown RBP11.49□□□□□ -0.57
LINC01550-202ENST00000502187 C1orf115Q9H7X2 142 aa11.49□□□□□ -0.57
LINC01550-202ENST00000502187 B4GALNT3Q6L9W6 998 aa11.48□□□□□ -0.57
LINC01550-202ENST00000502187 CCDC136Q96JN2 1154 aa11.48□□□□□ -0.57
LINC01550-202ENST00000502187 BCL9O00512 1426 aa11.48□□□□□ -0.57
LINC01550-202ENST00000502187 SNRPA1P09661 255 aaKnown RBP11.48□□□□□ -0.57
LINC01550-202ENST00000502187 ITPRIPQ8IWB1 547 aa11.48□□□□□ -0.57
LINC01550-202ENST00000502187 ABCC4O15439 1325 aa11.48□□□□□ -0.57
LINC01550-202ENST00000502187 TMEM57Q8N5G2 664 aa11.47□□□□□ -0.57
LINC01550-202ENST00000502187 PIGBQ92521 554 aa11.47□□□□□ -0.57
LINC01550-202ENST00000502187 CHPF2Q9P2E5 772 aa11.47□□□□□ -0.57
LINC01550-202ENST00000502187 N4BP2Q86UW6 1770 aaPredicted RBP11.47□□□□□ -0.57
LINC01550-202ENST00000502187 RGS12O14924 1447 aa11.47□□□□□ -0.57
LINC01550-202ENST00000502187 PRAMEF22A3QJZ6 481 aa11.47□□□□□ -0.57
LINC01550-202ENST00000502187 FLIIQ13045 1269 aa11.47□□□□□ -0.57
LINC01550-202ENST00000502187 ZMYND15Q9H091 742 aa11.47□□□□□ -0.57
LINC01550-202ENST00000502187 DDX19BQ9UMR2 479 aa11.47□□□□□ -0.57
LINC01550-202ENST00000502187 KCNQ2O43526 872 aa11.46□□□□□ -0.57
LINC01550-202ENST00000502187 G2E3Q7L622 706 aa11.46□□□□□ -0.57
LINC01550-202ENST00000502187 KRT27Q7Z3Y8 459 aa11.46□□□□□ -0.57
LINC01550-202ENST00000502187 DBF4Q9UBU7 674 aaPredicted RBP11.46□□□□□ -0.57
LINC01550-202ENST00000502187 AAMPQ13685 434 aa11.46□□□□□ -0.58
LINC01550-202ENST00000502187 FKBP5Q13451 457 aaPredicted RBP11.45□□□□□ -0.58
LINC01550-202ENST00000502187 PTCD1O75127 700 aaKnown RBP11.45□□□□□ -0.58
LINC01550-202ENST00000502187 ASAP1Q9ULH1 1129 aa11.45□□□□□ -0.58
LINC01550-202ENST00000502187 ATG3Q9NT62 314 aa11.44□□□□□ -0.58
LINC01550-202ENST00000502187 GTPBP6O43824 516 aaPredicted RBP11.44□□□□□ -0.58
LINC01550-202ENST00000502187 ANXA1P04083 346 aa11.44□□□□□ -0.58
LINC01550-202ENST00000502187 CHMP4BQ9H444 224 aaKnown RBP11.44□□□□□ -0.58
LINC01550-202ENST00000502187 PHAXQ9H814 394 aaKnown RBP11.44□□□□□ -0.58
LINC01550-202ENST00000502187 DDX21Q9NR30 783 aaKnown RBP eCLIP11.44□□□□□ -0.58
LINC01550-202ENST00000502187 USP16Q9Y5T5 823 aa11.44□□□□□ -0.58
LINC01550-202ENST00000502187 PXDNLA1KZ92 1463 aa11.44□□□□□ -0.58
LINC01550-202ENST00000502187 NHSQ6T4R5 1651 aa11.43□□□□□ -0.58
LINC01550-202ENST00000502187 PTF1AQ7RTS3 328 aa11.43□□□□□ -0.58
LINC01550-202ENST00000502187 HYPKQ9NX55 129 aa11.43□□□□□ -0.58
LINC01550-202ENST00000502187 BRWD3Q6RI45 1802 aa11.43□□□□□ -0.58
LINC01550-202ENST00000502187 SBF2Q86WG5 1849 aa11.43□□□□□ -0.58
LINC01550-202ENST00000502187 RBM42Q9BTD8 480 aaKnown RBP11.43□□□□□ -0.58
LINC01550-202ENST00000502187 TJP1Q07157 1748 aa11.42□□□□□ -0.58
LINC01550-202ENST00000502187 ERBB4Q15303 1308 aa11.42□□□□□ -0.58
LINC01550-202ENST00000502187 F6X3S4 739 aa11.42□□□□□ -0.58
LINC01550-202ENST00000502187 PROSER3Q2NL68 480 aa11.42□□□□□ -0.58
LINC01550-202ENST00000502187 INTS3Q68E01 1043 aaKnown RBP11.42□□□□□ -0.58
LINC01550-202ENST00000502187 BTAF1O14981 1849 aa11.42□□□□□ -0.58
LINC01550-202ENST00000502187 SLC4A10Q6U841 1118 aa11.42□□□□□ -0.58
LINC01550-202ENST00000502187 FAM196AQ6ZSG2 479 aa11.42□□□□□ -0.58
LINC01550-202ENST00000502187 CCT4P50991 539 aaKnown RBP11.41□□□□□ -0.58
LINC01550-202ENST00000502187 PDIA6Q15084 440 aa11.41□□□□□ -0.58
LINC01550-202ENST00000502187 TEX13AQ9BXU3 409 aaPredicted RBP11.41□□□□□ -0.58
LINC01550-202ENST00000502187 CIZ1Q9ULV3 898 aaPredicted RBP11.41□□□□□ -0.58
LINC01550-202ENST00000502187 MYL6BP14649 208 aa11.41□□□□□ -0.58
LINC01550-202ENST00000502187 CICQ96RK0 1608 aaPredicted RBP11.4□□□□□ -0.58
LINC01550-202ENST00000502187 TRIM37O94972 964 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms