RNA–Protein interactions for RNA: ENST00000501412.2

RAP1B-213, Transcript of RAP1B, member of RAS oncogene family, human

TSL 2

Gene RAP1B, Length 1,488 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-213	ENST00000501412	LY75	O60449	1722 aa		28.47	■■■□□ 2.15
RAP1B-213	ENST00000501412	LOC102724428	A0A0B4J2F2	783 aa		28.46	■■■□□ 2.15
RAP1B-213	ENST00000501412	SIK1	P57059	783 aa		28.46	■■■□□ 2.15
RAP1B-213	ENST00000501412	DNAJC10	Q8IXB1	793 aa		28.46	■■■□□ 2.15
RAP1B-213	ENST00000501412	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	28.46	■■■□□ 2.15
RAP1B-213	ENST00000501412	TRIM37	O94972	964 aa		28.45	■■■□□ 2.14
RAP1B-213	ENST00000501412	G2E3	Q7L622	706 aa		28.45	■■■□□ 2.14
RAP1B-213	ENST00000501412	FRAT1	Q92837	279 aa	Predicted RBP	28.45	■■■□□ 2.14
RAP1B-213	ENST00000501412	TEX13A	Q9BXU3	409 aa	Predicted RBP	28.45	■■■□□ 2.14
RAP1B-213	ENST00000501412	DBF4	Q9UBU7	674 aa	Predicted RBP	28.45	■■■□□ 2.14
RAP1B-213	ENST00000501412	PROSER3	Q2NL68	480 aa		28.44	■■■□□ 2.14
RAP1B-213	ENST00000501412	LRP10	Q7Z4F1	713 aa		28.44	■■■□□ 2.14
RAP1B-213	ENST00000501412	ARHGAP45	Q92619	1136 aa		28.44	■■■□□ 2.14
RAP1B-213	ENST00000501412	ERBB4	Q15303	1308 aa		28.43	■■■□□ 2.14
RAP1B-213	ENST00000501412	C20orf194	Q5TEA3	1177 aa		28.43	■■■□□ 2.14
RAP1B-213	ENST00000501412	ZKSCAN2	Q63HK3	967 aa		28.43	■■■□□ 2.14
RAP1B-213	ENST00000501412	DDX21	Q9NR30	783 aa	Known RBP eCLIP	28.43	■■■□□ 2.14
RAP1B-213	ENST00000501412	TNN	Q9UQP3	1299 aa		28.43	■■■□□ 2.14
RAP1B-213	ENST00000501412	TRIM27	P14373	513 aa		28.42	■■■□□ 2.14
RAP1B-213	ENST00000501412	ANXA1	P04083	346 aa		28.41	■■■□□ 2.14
RAP1B-213	ENST00000501412	ITPK1	Q13572	414 aa		28.41	■■■□□ 2.14
RAP1B-213	ENST00000501412	ATF7IP	Q6VMQ6	1270 aa		28.41	■■■□□ 2.14
RAP1B-213	ENST00000501412	CCDC125	Q86Z20	511 aa		28.41	■■■□□ 2.14
RAP1B-213	ENST00000501412	COL5A3	P25940	1745 aa	Predicted RBP	28.41	■■■□□ 2.14
RAP1B-213	ENST00000501412	IPO8	O15397	1037 aa	Known RBP	28.4	■■■□□ 2.14
RAP1B-213	ENST00000501412	CYP19A1	P11511	503 aa	Predicted RBP	28.4	■■■□□ 2.14
RAP1B-213	ENST00000501412	TNS1	Q9HBL0	1735 aa	Known RBP	28.4	■■■□□ 2.14
RAP1B-213	ENST00000501412	PTPRC	P08575	1304 aa		28.4	■■■□□ 2.14
RAP1B-213	ENST00000501412	NBPF26	B4DH59	902 aa		28.4	■■■□□ 2.14
RAP1B-213	ENST00000501412	ATP6V1A	P38606	617 aa		28.4	■■■□□ 2.14
RAP1B-213	ENST00000501412	FLII	Q13045	1269 aa		28.4	■■■□□ 2.14
RAP1B-213	ENST00000501412	PDE3A	Q14432	1141 aa		28.4	■■■□□ 2.14
RAP1B-213	ENST00000501412	NBPF14	Q5TI25	921 aa		28.4	■■■□□ 2.14
RAP1B-213	ENST00000501412	NBPF10	Q6P3W6	841 aa	Known RBP	28.4	■■■□□ 2.14
RAP1B-213	ENST00000501412	NBPF15	Q8N660	670 aa		28.4	■■■□□ 2.14
RAP1B-213	ENST00000501412	PHAX	Q9H814	394 aa	Known RBP	28.4	■■■□□ 2.14
RAP1B-213	ENST00000501412	RREB1	Q92766	1687 aa		28.39	■■■□□ 2.14
RAP1B-213	ENST00000501412	IRX6	P78412	446 aa	Predicted RBP	28.39	■■■□□ 2.13
RAP1B-213	ENST00000501412	STARD3NL	O95772	234 aa		28.38	■■■□□ 2.13
RAP1B-213	ENST00000501412	A1BG	P04217	495 aa		28.38	■■■□□ 2.13
RAP1B-213	ENST00000501412	RLBP1	P12271	317 aa		28.38	■■■□□ 2.13
RAP1B-213	ENST00000501412	CANX	P27824	592 aa	Known RBP	28.38	■■■□□ 2.13
RAP1B-213	ENST00000501412	HYPK	Q9NX55	129 aa		28.38	■■■□□ 2.13
RAP1B-213	ENST00000501412	PIP4K2A	P48426	406 aa	Predicted RBP	28.36	■■■□□ 2.13
RAP1B-213	ENST00000501412	ABCC4	O15439	1325 aa		28.35	■■■□□ 2.13
RAP1B-213	ENST00000501412	PANK1	Q8TE04	598 aa		28.34	■■■□□ 2.13
RAP1B-213	ENST00000501412	API5	Q9BZZ5	524 aa	Known RBP	28.34	■■■□□ 2.13
RAP1B-213	ENST00000501412	MYH14	Q7Z406	1995 aa	Known RBP	28.34	■■■□□ 2.13
RAP1B-213	ENST00000501412	TAF1L	Q8IZX4	1826 aa		28.34	■■■□□ 2.13
RAP1B-213	ENST00000501412	NEFL	P07196	543 aa		28.34	■■■□□ 2.13
RAP1B-213	ENST00000501412	MYL6B	P14649	208 aa		28.34	■■■□□ 2.13
RAP1B-213	ENST00000501412	DZIP1L	Q8IYY4	767 aa	Known RBP	28.34	■■■□□ 2.13
RAP1B-213	ENST00000501412	CLUAP1	Q96AJ1	413 aa		28.34	■■■□□ 2.13
RAP1B-213	ENST00000501412	LINC00116	Q8NCU8	138 aa		28.33	■■■□□ 2.13
RAP1B-213	ENST00000501412	KCNQ4	P56696	695 aa		28.32	■■■□□ 2.12
RAP1B-213	ENST00000501412	INTS5	Q6P9B9	1019 aa	Known RBP	28.32	■■■□□ 2.12
RAP1B-213	ENST00000501412	CCNL1	Q9UK58	526 aa	Predicted RBP	28.32	■■■□□ 2.12
RAP1B-213	ENST00000501412	MS4A1	P11836	297 aa		28.31	■■■□□ 2.12
RAP1B-213	ENST00000501412	CRKL	P46109	303 aa	Known RBP	28.31	■■■□□ 2.12
RAP1B-213	ENST00000501412	FKBP8	Q14318	412 aa		28.31	■■■□□ 2.12
RAP1B-213	ENST00000501412	ZBTB1	Q9Y2K1	713 aa		28.31	■■■□□ 2.12
RAP1B-213	ENST00000501412	PLSCR1	O15162	318 aa		28.3	■■■□□ 2.12
RAP1B-213	ENST00000501412	FKBP5	Q13451	457 aa	Predicted RBP	28.3	■■■□□ 2.12
RAP1B-213	ENST00000501412	RGPD3	A6NKT7	1758 aa	Predicted RBP	28.3	■■■□□ 2.12
RAP1B-213	ENST00000501412	RGPD4	Q7Z3J3	1758 aa		28.3	■■■□□ 2.12
RAP1B-213	ENST00000501412	ADCY9	O60503	1353 aa		28.29	■■■□□ 2.12
RAP1B-213	ENST00000501412	XAGE3	Q8WTP9	111 aa		28.29	■■■□□ 2.12
RAP1B-213	ENST00000501412	CRBN	Q96SW2	442 aa		28.29	■■■□□ 2.12
RAP1B-213	ENST00000501412	LRRC4B	Q9NT99	713 aa		28.29	■■■□□ 2.12
RAP1B-213	ENST00000501412	CCDC87	Q9NVE4	849 aa		28.29	■■■□□ 2.12
RAP1B-213	ENST00000501412	COPS6	Q7L5N1	327 aa		28.28	■■■□□ 2.12
RAP1B-213	ENST00000501412	FTSJ3	Q8IY81	847 aa	Known RBP	28.28	■■■□□ 2.12
RAP1B-213	ENST00000501412	CNTNAP4	Q9C0A0	1308 aa		28.28	■■■□□ 2.12
RAP1B-213	ENST00000501412	N4BP2	Q86UW6	1770 aa	Predicted RBP	28.28	■■■□□ 2.12
RAP1B-213	ENST00000501412		F6X3S4	739 aa		28.27	■■■□□ 2.12
RAP1B-213	ENST00000501412	SF3B2	Q13435	895 aa	Known RBP	28.27	■■■□□ 2.12
RAP1B-213	ENST00000501412	PROM2	Q8N271	834 aa		28.27	■■■□□ 2.12
RAP1B-213	ENST00000501412	TMEM57	Q8N5G2	664 aa		28.27	■■■□□ 2.12
RAP1B-213	ENST00000501412	APBA3	O96018	575 aa		28.27	■■■□□ 2.12
RAP1B-213	ENST00000501412	SLC27A3	Q5K4L6	730 aa		28.27	■■■□□ 2.12
RAP1B-213	ENST00000501412	GTF3C3	Q9Y5Q9	886 aa		28.27	■■■□□ 2.12
RAP1B-213	ENST00000501412	PXDNL	A1KZ92	1463 aa		28.26	■■■□□ 2.11
RAP1B-213	ENST00000501412	EXOC6	Q8TAG9	804 aa		28.26	■■■□□ 2.11
RAP1B-213	ENST00000501412	COG6	Q9Y2V7	657 aa		28.26	■■■□□ 2.11
RAP1B-213	ENST00000501412	C4B	P0C0L5	1744 aa		28.25	■■■□□ 2.11
RAP1B-213	ENST00000501412	PI4KAP2	A4QPH2	592 aa		28.25	■■■□□ 2.11
RAP1B-213	ENST00000501412	IL6ST	P40189	918 aa	Predicted RBP	28.25	■■■□□ 2.11
RAP1B-213	ENST00000501412	AIMP1	Q12904	312 aa	Known RBP	28.25	■■■□□ 2.11
RAP1B-213	ENST00000501412	MVP	Q14764	893 aa	Known RBP	28.25	■■■□□ 2.11
RAP1B-213	ENST00000501412	RC3H1	Q5TC82	1133 aa	Known RBP	28.25	■■■□□ 2.11
RAP1B-213	ENST00000501412	INTS3	Q68E01	1043 aa	Known RBP	28.25	■■■□□ 2.11
RAP1B-213	ENST00000501412	PI4KAP1	Q8N8J0	262 aa		28.25	■■■□□ 2.11
RAP1B-213	ENST00000501412	EIF5	P55010	431 aa	Known RBP	28.24	■■■□□ 2.11
RAP1B-213	ENST00000501412	KSR2	Q6VAB6	950 aa		28.24	■■■□□ 2.11
RAP1B-213	ENST00000501412	NUP188	Q5SRE5	1749 aa		28.23	■■■□□ 2.11
RAP1B-213	ENST00000501412	TXNRD1	Q16881	649 aa		28.23	■■■□□ 2.11
RAP1B-213	ENST00000501412	TTLL7	Q6ZT98	887 aa		28.23	■■■□□ 2.11
RAP1B-213	ENST00000501412	DEFB132	Q7Z7B7	95 aa		28.23	■■■□□ 2.11
RAP1B-213	ENST00000501412	ERICH6B	Q5W0A0	696 aa		28.22	■■■□□ 2.11
RAP1B-213	ENST00000501412	DDX58	O95786	925 aa	Known RBP	28.21	■■■□□ 2.11

Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms