RNA–Protein interactions for RNA: ENST00000499786.4

MED28-202, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 606 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-202ENST00000499786 KIF1AQ12756 1690 aa9.17□□□□□ -0.94
MED28-202ENST00000499786 AATKQ6ZMQ8 1374 aa9.17□□□□□ -0.94
MED28-202ENST00000499786 TTC21BQ7Z4L5 1316 aa9.17□□□□□ -0.94
MED28-202ENST00000499786 MAPK8IP3Q9UPT6 1336 aa9.17□□□□□ -0.94
MED28-202ENST00000499786 CFHP08603 1231 aa9.17□□□□□ -0.94
MED28-202ENST00000499786 APLP1P51693 650 aa9.17□□□□□ -0.94
MED28-202ENST00000499786 NME9Q86XW9 330 aa9.17□□□□□ -0.94
MED28-202ENST00000499786 SALL2Q9Y467 1007 aaPredicted RBP9.17□□□□□ -0.94
MED28-202ENST00000499786 RGPD8O14715 1765 aaPredicted RBP9.17□□□□□ -0.94
MED28-202ENST00000499786 LRRC7Q96NW7 1537 aa9.16□□□□□ -0.94
MED28-202ENST00000499786 COL3A1P02461 1466 aaPredicted RBP9.16□□□□□ -0.94
MED28-202ENST00000499786 U2SURPO15042 1029 aaKnown RBP9.16□□□□□ -0.94
MED28-202ENST00000499786 ACTN4O43707 911 aaKnown RBP9.16□□□□□ -0.94
MED28-202ENST00000499786 DIAPH1O60610 1272 aaKnown RBP9.16□□□□□ -0.94
MED28-202ENST00000499786 U2AF1L5P0DN76 240 aaPredicted RBP9.16□□□□□ -0.94
MED28-202ENST00000499786 U2AF1Q01081 240 aaKnown RBP eCLIP9.16□□□□□ -0.94
MED28-202ENST00000499786 CCDC146Q8IYE0 955 aa9.16□□□□□ -0.94
MED28-202ENST00000499786 RNF166Q96A37 237 aaPredicted RBP9.16□□□□□ -0.94
MED28-202ENST00000499786 RUNDC1Q96C34 613 aa9.16□□□□□ -0.94
MED28-202ENST00000499786 OVOS2A0A0J9YW53 1432 aa9.15□□□□□ -0.94
MED28-202ENST00000499786 OVOS2Q6IE36 1432 aa9.15□□□□□ -0.94
MED28-202ENST00000499786 PPM1GO15355 546 aaPredicted RBP9.15□□□□□ -0.94
MED28-202ENST00000499786 RNF40O75150 1001 aa9.15□□□□□ -0.94
MED28-202ENST00000499786 KDM4AO75164 1064 aa9.15□□□□□ -0.94
MED28-202ENST00000499786 PROSER2Q86WR7 435 aaPredicted RBP9.15□□□□□ -0.94
MED28-202ENST00000499786 PMFBP1Q8TBY8 1022 aa9.15□□□□□ -0.94
MED28-202ENST00000499786 TBC1D2Q9BYX2 928 aa9.15□□□□□ -0.94
MED28-202ENST00000499786 SUPT16HQ9Y5B9 1047 aaKnown RBP9.15□□□□□ -0.94
MED28-202ENST00000499786 IQSEC2Q5JU85 1478 aa9.15□□□□□ -0.95
MED28-202ENST00000499786 LMTK3Q96Q04 1460 aa9.15□□□□□ -0.95
MED28-202ENST00000499786 MAP2P11137 1827 aaKnown RBP9.15□□□□□ -0.95
MED28-202ENST00000499786 DCCP43146 1447 aa9.14□□□□□ -0.95
MED28-202ENST00000499786 NCOA3Q9Y6Q9 1424 aa9.14□□□□□ -0.95
MED28-202ENST00000499786 USP54Q70EL1 1684 aa9.14□□□□□ -0.95
MED28-202ENST00000499786 SENP3-EIF4A1A0A087X0R7 540 aa9.14□□□□□ -0.95
MED28-202ENST00000499786 TMEM132AQ24JP5 1023 aa9.14□□□□□ -0.95
MED28-202ENST00000499786 NYAP1Q6ZVC0 841 aa9.14□□□□□ -0.95
MED28-202ENST00000499786 GOPCQ9HD26 462 aa9.14□□□□□ -0.95
MED28-202ENST00000499786 PIK3C2AO00443 1686 aa9.13□□□□□ -0.95
MED28-202ENST00000499786 APAF1O14727 1248 aa9.13□□□□□ -0.95
MED28-202ENST00000499786 USP46P62068 366 aa9.13□□□□□ -0.95
MED28-202ENST00000499786 MYT1Q01538 1121 aa9.13□□□□□ -0.95
MED28-202ENST00000499786 MYSM1Q5VVJ2 828 aa9.13□□□□□ -0.95
MED28-202ENST00000499786 ERICH6BQ5W0A0 696 aa9.13□□□□□ -0.95
MED28-202ENST00000499786 PNPLA6Q8IY17 1366 aa9.12□□□□□ -0.95
MED28-202ENST00000499786 ATF3P18847 181 aa9.12□□□□□ -0.95
MED28-202ENST00000499786 PTPN5P54829 565 aa9.12□□□□□ -0.95
MED28-202ENST00000499786 FUT2Q10981 343 aa9.12□□□□□ -0.95
MED28-202ENST00000499786 DIXDC1Q155Q3 683 aa9.12□□□□□ -0.95
MED28-202ENST00000499786 KMT5BQ4FZB7 885 aa9.12□□□□□ -0.95
MED28-202ENST00000499786 SH3D19Q5HYK7 790 aa9.12□□□□□ -0.95
MED28-202ENST00000499786 MSH6P52701 1360 aa9.12□□□□□ -0.95
MED28-202ENST00000499786 USP31Q70CQ4 1352 aa9.12□□□□□ -0.95
MED28-202ENST00000499786 E9PSI1 815 aa9.11□□□□□ -0.95
MED28-202ENST00000499786 HOXA2O43364 376 aa9.11□□□□□ -0.95
MED28-202ENST00000499786 GJA5P36382 358 aa9.11□□□□□ -0.95
MED28-202ENST00000499786 HSPA2P54652 639 aa9.11□□□□□ -0.95
MED28-202ENST00000499786 ESCO1Q5FWF5 840 aa9.11□□□□□ -0.95
MED28-202ENST00000499786 NUTM1Q86Y26 1132 aa9.11□□□□□ -0.95
MED28-202ENST00000499786 PRR14Q9BWN1 585 aa9.11□□□□□ -0.95
MED28-202ENST00000499786 RSPH6AQ9H0K4 717 aa9.11□□□□□ -0.95
MED28-202ENST00000499786 HCSTQ9UBK5 93 aa9.11□□□□□ -0.95
MED28-202ENST00000499786 POLKQ9UBT6 870 aa9.11□□□□□ -0.95
MED28-202ENST00000499786 SSH2Q76I76 1423 aa9.11□□□□□ -0.95
MED28-202ENST00000499786 FLT4P35916 1363 aa9.11□□□□□ -0.95
MED28-202ENST00000499786 MOXD2PA6NHM9 499 aa9.1□□□□□ -0.95
MED28-202ENST00000499786 SPTLC1O15269 473 aa9.1□□□□□ -0.95
MED28-202ENST00000499786 ATP6V1AP38606 617 aa9.1□□□□□ -0.95
MED28-202ENST00000499786 SKIV2LQ15477 1246 aaKnown RBP9.1□□□□□ -0.95
MED28-202ENST00000499786 MORN1Q5T089 497 aa9.1□□□□□ -0.95
MED28-202ENST00000499786 TCP11L2Q8N4U5 519 aa9.1□□□□□ -0.95
MED28-202ENST00000499786 C19orf44Q9H6X5 657 aa9.1□□□□□ -0.95
MED28-202ENST00000499786 RCAN3Q9UKA8 241 aa9.1□□□□□ -0.95
MED28-202ENST00000499786 EMILIN1Q9Y6C2 1016 aa9.1□□□□□ -0.95
MED28-202ENST00000499786 SBNO1A3KN83 1393 aa9.1□□□□□ -0.95
MED28-202ENST00000499786 TMEM94Q12767 1356 aa9.1□□□□□ -0.95
MED28-202ENST00000499786 PSME1Q06323 249 aa9.09□□□□□ -0.95
MED28-202ENST00000499786 RRS1Q15050 365 aaKnown RBP9.09□□□□□ -0.95
MED28-202ENST00000499786 TUSC1Q2TAM9 212 aa9.09□□□□□ -0.95
MED28-202ENST00000499786 RSBN1LQ6PCB5 846 aaPredicted RBP9.09□□□□□ -0.95
MED28-202ENST00000499786 ABTB2Q8N961 1025 aa9.09□□□□□ -0.95
MED28-202ENST00000499786 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.09□□□□□ -0.95
MED28-202ENST00000499786 RTL1A6NKG5 1358 aa9.09□□□□□ -0.95
MED28-202ENST00000499786 KIF24Q5T7B8 1368 aa9.09□□□□□ -0.95
MED28-202ENST00000499786 STRCQ7RTU9 1775 aa9.09□□□□□ -0.95
MED28-202ENST00000499786 C1orf167Q5SNV9 1468 aa9.08□□□□□ -0.96
MED28-202ENST00000499786 ZNF521Q96K83 1311 aa9.08□□□□□ -0.96
MED28-202ENST00000499786 NDUFV2P19404 249 aa9.08□□□□□ -0.96
MED28-202ENST00000499786 AMPHP49418 695 aa9.08□□□□□ -0.96
MED28-202ENST00000499786 LMOD3Q0VAK6 560 aa9.08□□□□□ -0.96
MED28-202ENST00000499786 CCDC27Q2M243 656 aa9.08□□□□□ -0.96
MED28-202ENST00000499786 HLA-CQ95604 372 aa9.08□□□□□ -0.96
MED28-202ENST00000499786 MYH16Q9H6N6 1097 aa9.08□□□□□ -0.96
MED28-202ENST00000499786 STRCP1A6NGW2 1772 aa9.08□□□□□ -0.96
MED28-202ENST00000499786 RRP1P56182 461 aaKnown RBP9.07□□□□□ -0.96
MED28-202ENST00000499786 CALD1Q05682 793 aaKnown RBP9.07□□□□□ -0.96
MED28-202ENST00000499786 RIC3Q7Z5B4 369 aa9.07□□□□□ -0.96
MED28-202ENST00000499786 WDR63Q8IWG1 891 aa9.07□□□□□ -0.96
MED28-202ENST00000499786 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.07□□□□□ -0.96
MED28-202ENST00000499786 LIMD1Q9UGP4 676 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms