RNA–Protein interactions for RNA: ENST00000499732.2

NEAT1-201, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 1,811 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-201ENST00000499732 KDM3BQ7LBC6 1761 aa18.04■□□□□ 0.48
NEAT1-201ENST00000499732 TRAK2O60296 914 aa18.03■□□□□ 0.48
NEAT1-201ENST00000499732 CHD1LQ86WJ1 897 aa18.03■□□□□ 0.48
NEAT1-201ENST00000499732 BABAM1Q9NWV8 329 aa18.03■□□□□ 0.48
NEAT1-201ENST00000499732 GCC1Q96CN9 775 aa18.02■□□□□ 0.48
NEAT1-201ENST00000499732 ABCC4O15439 1325 aa18.02■□□□□ 0.48
NEAT1-201ENST00000499732 ADAMTS7Q9UKP4 1686 aa18.02■□□□□ 0.48
NEAT1-201ENST00000499732 PKD1L3Q7Z443 1732 aa18.02■□□□□ 0.48
NEAT1-201ENST00000499732 XRCC6P12956 609 aaKnown RBP eCLIP18.02■□□□□ 0.47
NEAT1-201ENST00000499732 PRKCSHP14314 528 aaPredicted RBP18.02■□□□□ 0.47
NEAT1-201ENST00000499732 TAF7Q15545 349 aaPredicted RBP18.02■□□□□ 0.47
NEAT1-201ENST00000499732 SPRYD3Q8NCJ5 442 aa18.02■□□□□ 0.47
NEAT1-201ENST00000499732 SRCAPQ6ZRS2 3230 aa18.01■□□□□ 0.47
NEAT1-201ENST00000499732 BAG6P46379 1132 aa18.01■□□□□ 0.47
NEAT1-201ENST00000499732 OVOS2A0A0G2JMS6 1433 aa18.01■□□□□ 0.47
NEAT1-201ENST00000499732 PTMSP20962 102 aa18■□□□□ 0.47
NEAT1-201ENST00000499732 MRE11P49959 708 aa18■□□□□ 0.47
NEAT1-201ENST00000499732 LGR6Q9HBX8 967 aa18■□□□□ 0.47
NEAT1-201ENST00000499732 SIPA1L3O60292 1781 aaPredicted RBP18■□□□□ 0.47
NEAT1-201ENST00000499732 IL2RBP14784 551 aa18■□□□□ 0.47
NEAT1-201ENST00000499732 DEFB132Q7Z7B7 95 aa18■□□□□ 0.47
NEAT1-201ENST00000499732 RRAGDQ9NQL2 400 aaPredicted RBP18■□□□□ 0.47
NEAT1-201ENST00000499732 API5Q9BZZ5 524 aaKnown RBP17.99■□□□□ 0.47
NEAT1-201ENST00000499732 CACNA1FO60840 1977 aa17.99■□□□□ 0.47
NEAT1-201ENST00000499732 IFNL2Q8IZJ0 200 aa17.98■□□□□ 0.47
NEAT1-201ENST00000499732 LNPKQ9C0E8 428 aa17.98■□□□□ 0.47
NEAT1-201ENST00000499732 WNK3Q9BYP7 1800 aa17.98■□□□□ 0.47
NEAT1-201ENST00000499732 SPATA31A1Q5TZJ5 1347 aa17.98■□□□□ 0.47
NEAT1-201ENST00000499732 EIF5BO60841 1220 aaKnown RBP17.98■□□□□ 0.47
NEAT1-201ENST00000499732 ZBTB7BO15156 539 aaPredicted RBP17.97■□□□□ 0.47
NEAT1-201ENST00000499732 RNMTO43148 476 aaKnown RBP17.97■□□□□ 0.47
NEAT1-201ENST00000499732 PHKG2P15735 406 aa17.97■□□□□ 0.47
NEAT1-201ENST00000499732 MPRIPQ6WCQ1 1025 aa17.97■□□□□ 0.47
NEAT1-201ENST00000499732 SCN11AQ9UI33 1791 aa17.97■□□□□ 0.47
NEAT1-201ENST00000499732 SOS1Q07889 1333 aaPredicted RBP17.96■□□□□ 0.47
NEAT1-201ENST00000499732 HSP90AB1P08238 724 aaKnown RBP17.96■□□□□ 0.47
NEAT1-201ENST00000499732 ZCRB1Q8TBF4 217 aaKnown RBP17.96■□□□□ 0.47
NEAT1-201ENST00000499732 GBP4Q96PP9 640 aa17.96■□□□□ 0.47
NEAT1-201ENST00000499732 TEFQ10587 303 aa17.95■□□□□ 0.46
NEAT1-201ENST00000499732 PTPRCP08575 1304 aa17.95■□□□□ 0.46
NEAT1-201ENST00000499732 RAB3GAP1Q15042 981 aa17.95■□□□□ 0.46
NEAT1-201ENST00000499732 BRWD3Q6RI45 1802 aa17.95■□□□□ 0.46
NEAT1-201ENST00000499732 PCDH11XQ9BZA7 1347 aa17.94■□□□□ 0.46
NEAT1-201ENST00000499732 PCDH11YQ9BZA8 1340 aa17.94■□□□□ 0.46
NEAT1-201ENST00000499732 CYP27B1O15528 508 aa17.94■□□□□ 0.46
NEAT1-201ENST00000499732 GZF1Q9H116 711 aaPredicted RBP17.94■□□□□ 0.46
NEAT1-201ENST00000499732 DISP2A7MBM2 1401 aa17.94■□□□□ 0.46
NEAT1-201ENST00000499732 SHANK3Q9BYB0 1731 aa17.94■□□□□ 0.46
NEAT1-201ENST00000499732 SLC4A2P04920 1241 aa17.93■□□□□ 0.46
NEAT1-201ENST00000499732 SKOR2Q2VWA4 1001 aaPredicted RBP17.93■□□□□ 0.46
NEAT1-201ENST00000499732 DCAF5Q96JK2 942 aa17.93■□□□□ 0.46
NEAT1-201ENST00000499732 CLCN1P35523 988 aa17.93■□□□□ 0.46
NEAT1-201ENST00000499732 FAM196AQ6ZSG2 479 aa17.93■□□□□ 0.46
NEAT1-201ENST00000499732 BARGINQ6ZT62 677 aa17.93■□□□□ 0.46
NEAT1-201ENST00000499732 GRPEL1Q9HAV7 217 aa17.93■□□□□ 0.46
NEAT1-201ENST00000499732 THRAP3Q9Y2W1 955 aaKnown RBP17.93■□□□□ 0.46
NEAT1-201ENST00000499732 EIF4A1P60842 406 aaKnown RBP17.92■□□□□ 0.46
NEAT1-201ENST00000499732 ANKRD45Q5TZF3 282 aa17.92■□□□□ 0.46
NEAT1-201ENST00000499732 INTS3Q68E01 1043 aaKnown RBP17.92■□□□□ 0.46
NEAT1-201ENST00000499732 TNPO1Q92973 898 aaKnown RBP17.92■□□□□ 0.46
NEAT1-201ENST00000499732 KIF2CQ99661 725 aa17.92■□□□□ 0.46
NEAT1-201ENST00000499732 CDCA7Q9BWT1 371 aaPredicted RBP17.92■□□□□ 0.46
NEAT1-201ENST00000499732 KDM6AO15550 1401 aaPredicted RBP17.92■□□□□ 0.46
NEAT1-201ENST00000499732 G2E3Q7L622 706 aa17.91■□□□□ 0.46
NEAT1-201ENST00000499732 PANK2Q9BZ23 570 aa17.91■□□□□ 0.46
NEAT1-201ENST00000499732 K7ELQ4 463 aaPredicted RBP17.91■□□□□ 0.46
NEAT1-201ENST00000499732 CCDC30Q5VVM6 783 aa17.91■□□□□ 0.46
NEAT1-201ENST00000499732 N4BP2Q86UW6 1770 aaPredicted RBP17.9■□□□□ 0.46
NEAT1-201ENST00000499732 BTBD11A6QL63 1104 aa17.9■□□□□ 0.46
NEAT1-201ENST00000499732 KCNQ3O43525 872 aa17.9■□□□□ 0.46
NEAT1-201ENST00000499732 NKX1-1Q15270 411 aaPredicted RBP17.9■□□□□ 0.46
NEAT1-201ENST00000499732 STK31Q9BXU1 1019 aa17.9■□□□□ 0.46
NEAT1-201ENST00000499732 TBC1D9Q6ZT07 1266 aa17.89■□□□□ 0.45
NEAT1-201ENST00000499732 THSD7AQ9UPZ6 1657 aa17.89■□□□□ 0.45
NEAT1-201ENST00000499732 HOXB7P09629 217 aa17.88■□□□□ 0.45
NEAT1-201ENST00000499732 SLC52A2Q9HAB3 445 aa17.88■□□□□ 0.45
NEAT1-201ENST00000499732 MRC1P22897 1456 aa17.88■□□□□ 0.45
NEAT1-201ENST00000499732 CDC45O75419 566 aa17.88■□□□□ 0.45
NEAT1-201ENST00000499732 EN1Q05925 392 aaPredicted RBP17.88■□□□□ 0.45
NEAT1-201ENST00000499732 FAM182BQ5T319 152 aa17.88■□□□□ 0.45
NEAT1-201ENST00000499732 ARXQ96QS3 562 aa17.88■□□□□ 0.45
NEAT1-201ENST00000499732 TNS2Q63HR2 1409 aa17.87■□□□□ 0.45
NEAT1-201ENST00000499732 CLEC17AQ6ZS10 378 aa17.87■□□□□ 0.45
NEAT1-201ENST00000499732 NECTIN2Q92692 538 aa17.87■□□□□ 0.45
NEAT1-201ENST00000499732 HEG1Q9ULI3 1381 aa17.87■□□□□ 0.45
NEAT1-201ENST00000499732 HDGFL1Q5TGJ6 251 aa17.86■□□□□ 0.45
NEAT1-201ENST00000499732 SIRT2Q8IXJ6 389 aa17.86■□□□□ 0.45
NEAT1-201ENST00000499732 C1orf115Q9H7X2 142 aa17.86■□□□□ 0.45
NEAT1-201ENST00000499732 EXOC5O00471 708 aa17.86■□□□□ 0.45
NEAT1-201ENST00000499732 HSP90AA1P07900 732 aaKnown RBP17.86■□□□□ 0.45
NEAT1-201ENST00000499732 FLIIQ13045 1269 aa17.86■□□□□ 0.45
NEAT1-201ENST00000499732 DDX54Q8TDD1 881 aaKnown RBP17.86■□□□□ 0.45
NEAT1-201ENST00000499732 IBTKQ9P2D0 1353 aaPredicted RBP17.85■□□□□ 0.45
NEAT1-201ENST00000499732 ERVV-2B6SEH9 535 aa17.85■□□□□ 0.45
NEAT1-201ENST00000499732 CHMP4AQ9BY43 222 aa17.85■□□□□ 0.45
NEAT1-201ENST00000499732 NFATC2IPQ8NCF5 419 aa17.84■□□□□ 0.45
NEAT1-201ENST00000499732 F6X3S4 739 aa17.84■□□□□ 0.45
NEAT1-201ENST00000499732 TRIM37O94972 964 aa17.84■□□□□ 0.45
NEAT1-201ENST00000499732 CABP4P57796 275 aa17.84■□□□□ 0.45
NEAT1-201ENST00000499732 GOLGA6L22H0YM25 854 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms